prot_H-elongata_contig157128.3720.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig157128.3720.1
Unique Nameprot_H-elongata_contig157128.3720.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length252
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig157128.3720.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10coord: 36..236
e-value: 7.7E-7
score: 29.8
IPR008615FNIPPFAMPF05725FNIPcoord: 65..98
e-value: 3.4E-6
score: 27.1
coord: 121..162
e-value: 2.9E-6
score: 27.3
coord: 165..207
e-value: 1.4E-8
score: 34.8
NoneNo IPR availablePANTHERPTHR32134UNCHARACTERIZEDcoord: 45..145
NoneNo IPR availablePANTHERPTHR32134:SF134FNIP REPEAT-CONTAINING PROTEIN DDB_G0274063/DDB_G0272642coord: 87..191
coord: 131..233
NoneNo IPR availablePANTHERPTHR32134UNCHARACTERIZEDcoord: 87..191
coord: 131..233
NoneNo IPR availablePANTHERPTHR32134:SF134FNIP REPEAT-CONTAINING PROTEIN DDB_G0274063/DDB_G0272642coord: 45..145
NoneNo IPR availableSUPERFAMILY52058L domain-likecoord: 43..208

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig157128contigH-elongata_contig157128:385..1140 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig157128.3720.1mRNA_H-elongata_contig157128.3720.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig157128 124..1450 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig157128.3720.1 ID=prot_H-elongata_contig157128.3720.1|Name=mRNA_H-elongata_contig157128.3720.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=252bp
MSVACISETGEDDGLEEEAFSGGARSLEFVERRTLFPETEWWFATLRKLK
LGRGFNSLVDGVLWPTSLEELKFGWDFNQPVDNVRWPASLRQLTFGYCFD
QPIDKVTWPELLQEMTLGLRFNQRLDEVDWPTSLRKLSFGKRFNQPIAGV
AWPRSLQQLSFGWDFNQPIVGATWPPSLEQLAFGQDFNQQIDGVTWPAAL
QELIFGESFNQPVHKVAWPDSLRRITFGKDFDQPMDALQDRGIKVTILRC
C*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR032675LRR_dom_sf
IPR008615FNIP