prot_H-elongata_contig15707.3719.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig15707.3719.1
Unique Nameprot_H-elongata_contig15707.3719.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length193
Homology
BLAST of mRNA_H-elongata_contig15707.3719.1 vs. uniprot
Match: D8LNN1_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LNN1_ECTSI)

HSP 1 Score: 164 bits (415), Expect = 8.750e-47
Identity = 91/194 (46.91%), Postives = 127/194 (65.46%), Query Frame = 0
Query:    1 MCWAQSRTTGLVKSIKFVELVASNMLAVTNLAICVNLALIIYGHRNVSRVKNLGSPKLMMMFLTFSIMATVTSVPLWDTLMITGSHVLVVGSSTGETTWVIFSQYSLEFIAGIVMVGIAIFLAVYRLPEMIEVWKLHRRIRFYFGLTLIAILNNLCVAVGGTLIVFDQCE-AILMSFAFSCRNVHIALDTIVLY 193
            +CWA S  TG VK++KF+ELVASNMLA+TNLAIC NLAL+I  HR ++RVK+  SP L+ + L  SI   V + P W T +++G+   V         W+  S++ LEF+ GI M  I  +L ++R+ E+ E WK+H RIR+YFGLTLI    NL + V GT+ V    E ++L+   ++ R++HIALDT VLY
Sbjct:    4 VCWAGSNVTGFVKALKFLELVASNMLAITNLAICANLALVIMSHRTLARVKSFSSPSLVFLSLAVSIAVAVAAAPFWQTTVVSGTGFAVRNEDQRSGDWLAVSRFFLEFLVGICMFVIVAWLLLFRINEVKECWKVHARIRYYFGLTLIGTTVNLALGVCGTIYVVGGREKSLLIVLTWTFRHIHIALDTFVLY 197          
BLAST of mRNA_H-elongata_contig15707.3719.1 vs. uniprot
Match: A0A6H5K8K6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K8K6_9PHAE)

HSP 1 Score: 151 bits (381), Expect = 7.170e-42
Identity = 81/194 (41.75%), Postives = 121/194 (62.37%), Query Frame = 0
Query:    1 MCWAQSRTTGLVKSIKFVELVASNMLAVTNLAICVNLALIIYGHRNVSRVKNLGSPKLMMMFLTFSIMATVTSVPLWDTLMITGSHVLVVGSSTGETTWVIFSQYSLEFIAGIVMVGIAIFLAVYRLPEMIEVWKLHRRIRFYFGLTLIAILNNLCVAVGGTLIVFD-QCEAILMSFAFSCRNVHIALDTIVLY 193
            +CW   R  G +K++K++E  +SNMLA+TNLAIC+NLAL++  HR +SRV ++ +P L+++FL  S++A   SVP W   +++G+   V  +   +  W+I S   LEF+ GI M  I  +L  +R+  + E WKLH RIR+YF LT+I    NL + + G   VF       L+S  ++ R  H+ALDTIVLY
Sbjct:   11 VCWVGERLEGFIKALKYLEQTSSNMLAITNLAICINLALVVNSHRTLSRVNSVSTPALVLLFLAISVVAAAASVPFWSITVVSGTAFWVTNADKAKADWIIVSIIILEFVVGICMFIIVSWLMAFRMRAIKECWKLHARIRYYFVLTVIGTAVNLALGISGFSYVFRANAGEYLLSLTWAFRYAHVALDTIVLY 204          
BLAST of mRNA_H-elongata_contig15707.3719.1 vs. uniprot
Match: D7FTK5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTK5_ECTSI)

HSP 1 Score: 146 bits (368), Expect = 1.960e-39
Identity = 81/194 (41.75%), Postives = 126/194 (64.95%), Query Frame = 0
Query:    1 MCWAQSRTTGLVKSIKFVELVASNMLAVTNLAICVNLALIIYGHRNVSRVKNLGSPKLMMMFLTFSIMATVTSVPLWDTLMITGSHVLVVGSSTGETTWVIFSQYSLEFIAGIVMVGIAIFLAVYRLPEMIEVWKLHRRIRFYFGLTLIAILNNLCVAVGGTLIVF-DQCEAILMSFAFSCRNVHIALDTIVLY 193
            +CW +S   G +K++KF+E V+SNM+A+T+LAICVNLALI+  HR ++RV+++ SP L+ + L  SI  T  +VPLW+T+ + G+   +V S  G    V+ S + LEF+ GI M  I  +L ++R+ E+ E W++  RIR+YF LTL+    N+ + +  T+ V  D  E  L  +++  R +H+ALDT VLY
Sbjct:   76 VCWTESDLIGFIKAVKFIEFVSSNMMAITHLAICVNLALIVSSHRTLTRVQSVSSPWLLSLLLAISIGITSVTVPLWETVYVIGTGFWIVNSDQGSYDAVVVSIFFLEFMVGICMFVILAWLLLFRMKEVKECWRIDARIRYYFCLTLLGTAVNIGIGICSTVFVIGDMDEPRLAIWSWVSRYIHVALDTFVLY 269          
BLAST of mRNA_H-elongata_contig15707.3719.1 vs. uniprot
Match: A0A6H5JWL8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWL8_9PHAE)

HSP 1 Score: 144 bits (364), Expect = 2.570e-39
Identity = 79/193 (40.93%), Postives = 122/193 (63.21%), Query Frame = 0
Query:    2 CWAQSRTTGLVKSIKFVELVASNMLAVTNLAICVNLALIIYGHRNVSRVKNLGSPKLMMMFLTFSIMATVTSVPLWDTLMITGSHVLVVGSSTGETTWVIFSQYSLEFIAGIVMVGIAIFLAVYRLPEMIEVWKLHRRIRFYFGLTLIAILNNLCVAVGGTLIVF-DQCEAILMSFAFSCRNVHIALDTIVLY 193
            C+A +   GL+K+I FV + +SNMLA TNL IC+NLALI+  HR ++RVK + SP+++ + L  S      +VPLW+T ++ G+H     S   +  ++I S Y +EF+ GI M+ I  +LA++R+ E+ E W+ H RIR+YF LTL     NL + + G   VF D+ E +   +++  R +HI+ DT+VLY
Sbjct:   27 CYAATNLVGLIKTINFVMMTSSNMLAATNLGICINLALIVSSHRTMTRVKTVSSPRVLFIMLLVSASLAAATVPLWETTVVLGTHFWFTNSDPVKNDFIIMSIYIIEFLVGICMLVIVFWLAMFRMTEIKECWRFHSRIRYYFCLTLFGTAVNLGLGICGAAYVFGDRKEPLPQIWSWLFRYIHISFDTLVLY 219          
BLAST of mRNA_H-elongata_contig15707.3719.1 vs. uniprot
Match: A0A6H5KRY2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KRY2_9PHAE)

HSP 1 Score: 141 bits (355), Expect = 3.540e-39
Identity = 71/168 (42.26%), Postives = 111/168 (66.07%), Query Frame = 0
Query:    1 MCWAQSRTTGLVKSIKFVELVASNMLAVTNLAICVNLALIIYGHRNVSRVKNLGSPKLMMMFLTFSIMATVTSVPLWDTLMITGSHVLVVGSSTGETTWVIFSQYSLEFIAGIVMVGIAIFLAVYRLPEMIEVWKLHRRIRFYFGLTLIAILNNLCVAVGGTLIVFDQ 168
            +CWA    + L+K +KF+EL ++NMLAVTNLAICVNLAL++  HR +SRV +L SP+++ + L  ++     +VP W T+++TG++         +  W + S++  EFI GI M+ I  +L ++R+ E+ E WK+H RIR+YFGLTLIA   NL + + GT+ +  +
Sbjct:    4 VCWAGGNLSNLIKFLKFLELASANMLAVTNLAICVNLALVVMSHRTLSRVSSLSSPRVIWLSLVLAVGGAAAAVPSWKTIILTGTYFSPYSEDKQDLDWSVVSRFLFEFIVGICMIAIVAWLLLFRMKEIKECWKVHTRIRYYFGLTLIATGVNLVLGIFGTVYIVGE 171          
BLAST of mRNA_H-elongata_contig15707.3719.1 vs. uniprot
Match: D8LNN2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNN2_ECTSI)

HSP 1 Score: 140 bits (352), Expect = 8.670e-39
Identity = 71/166 (42.77%), Postives = 107/166 (64.46%), Query Frame = 0
Query:    1 MCWAQSRTTGLVKSIKFVELVASNMLAVTNLAICVNLALIIYGHRNVSRVKNLGSPKLMMMFLTFSIMATVTSVPLWDTLMITGSHVLVVGSSTGETTWVIFSQYSLEFIAGIVMVGIAIFLAVYRLPEMIEVWKLHRRIRFYFGLTLIAILNNLCVAVGGTLIVF 166
            +CW   R  G +K++K++E  +SNMLA+TNLAIC+NLAL++  HR +SRVK++ +P L+++FL  S++A   SVP W   +++G+   V  +   +  W+I S   LEF+ GI M  I  +L  +R+  + E WK+H RIR+YF LTLIA   NL + + G   VF
Sbjct:    4 VCWVGERLEGFIKALKYLEQTSSNMLAITNLAICINLALVVNSHRTLSRVKSVSTPALVLLFLAISVIAAAASVPFWSITVVSGTAFWVTNADKAKADWIIVSIIILEFVVGICMFVIVSWLMAFRMQAIKECWKIHARIRYYFVLTLIATAVNLALGISGLSYVF 169          
BLAST of mRNA_H-elongata_contig15707.3719.1 vs. uniprot
Match: D8LNP0_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LNP0_ECTSI)

HSP 1 Score: 141 bits (356), Expect = 1.320e-38
Identity = 79/194 (40.72%), Postives = 124/194 (63.92%), Query Frame = 0
Query:    1 MCWAQSRTTGLVKSIKFVELVASNMLAVTNLAICVNLALIIYGHRNVSRVKNLGSPKLMMMFLTFSIMATVTSVPLWDTLMITGSHVLVVGSSTGETTWVIFSQYSLEFIAGIVMVGIAIFLAVYRLPEMIEVWKLHRRIRFYFGLTLIAILNNLCVAVGGTL-IVFDQCEAILMSFAFSCRNVHIALDTIVLY 193
            +CWA       +K++KF+EL ASNMLA+TNLAICVNL+LI+   R  S VK++ + KL+++FL  S      +VP W   +++G+    +G +  +  +V+ S + +EF+ GI M  I  +L ++R+ E+ E W +H  +R+YFGLTL+  + NL + V GT+ ++ D    +LM F++  R V IALDTIVL+
Sbjct:    4 VCWAGENLATFIKTLKFLELFASNMLAITNLAICVNLSLIVMSRRPQSHVKSISTHKLVLLFLALSAGLAAIAVPFWGLTVLSGTGFWELGENKRDHEFVMISTFMVEFLVGICMFVIVSWLLLFRMTEIKECWMMHACLRYYFGLTLLGTVGNLTLGVCGTIYVISDMAWPLLMIFSWGFRQVRIALDTIVLH 197          
BLAST of mRNA_H-elongata_contig15707.3719.1 vs. uniprot
Match: D7FTK4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTK4_ECTSI)

HSP 1 Score: 142 bits (357), Expect = 2.850e-38
Identity = 80/194 (41.24%), Postives = 126/194 (64.95%), Query Frame = 0
Query:    1 MCWAQSRTTGLVKSIKFVELVASNMLAVTNLAICVNLALIIYGHRNVSRVKNLGSPKLMMMFLTFSIMATVTSVPLWDTLMITGSHVLVVGSSTGETTWVIFSQYSLEFIAGIVMVGIAIFLAVYRLPEMIEVWKLHRRIRFYFGLTLIAILNNLCVAVGGTLIVFDQCEAILMS-FAFSCRNVHIALDTIVLY 193
            +CWA      L+K++KFVEL +S+MLA+T+LAICVNLALI+  HR + RV+++ SP L+ + L  S+  T  +VPLW+T+++ G+   +V S  G+   V+ S + LEFI G+ M  I  +L ++RL E+ E W++H RIR+Y  LT++    +L + +  T+ V    +   ++ +A+  R +HIALDT VLY
Sbjct:   27 VCWAGKNLEDLIKTVKFVELASSHMLALTHLAICVNLALIVSSHRTLKRVQSVSSPGLLTLMLAISMGMTAATVPLWETVIVVGTSFWIVNSDQGKYDAVVVSIFFLEFIVGLCMFVIVAWLLLFRLKEVKECWRIHARIRYYLCLTVLGTGISLSIGICSTVFVLGGLKQTRLAIWAWVFRYIHIALDTFVLY 220          
BLAST of mRNA_H-elongata_contig15707.3719.1 vs. uniprot
Match: D8LNM4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNM4_ECTSI)

HSP 1 Score: 140 bits (352), Expect = 1.270e-37
Identity = 73/165 (44.24%), Postives = 109/165 (66.06%), Query Frame = 0
Query:    1 MCWAQSRTTGLVKSIKFVELVASNMLAVTNLAICVNLALIIYGHRNVSRVKNLGSPKLMMMFLTFSIMATVTSVPLWDTLMITGSHVLVVGSSTGETTWVIFSQYSLEFIAGIVMVGIAIFLAVYRLPEMIEVWKLHRRIRFYFGLTLIAILNNLCVAVGGTLIV 165
            +CWA    T L+K++KF EL ASNMLA+TNLAICVNLALI+  HR +SRV++  +P L+++FL  S+     SVP W  ++++G+   V         W++ + + +EF  GI M+ I ++L ++R  E+ + WK+H RIR+YFGLTLIA   NL + + GT+ V
Sbjct:  102 VCWAGDSLTKLIKTLKFFELAASNMLAITNLAICVNLALIVMSHRTLSRVRSASTPALILVFLALSLGVAAISVPFWTEMVVSGTAFWVQTHEQAAHDWIVVAGFFVEFFVGICMLVIVVWLVIFRRTEIKQSWKMHARIRYYFGLTLIATGVNLALGICGTIYV 266          
BLAST of mRNA_H-elongata_contig15707.3719.1 vs. uniprot
Match: D8LNM5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNM5_ECTSI)

HSP 1 Score: 116 bits (291), Expect = 1.510e-29
Identity = 66/171 (38.60%), Postives = 104/171 (60.82%), Query Frame = 0
Query:    1 MCWAQSRTTGLVKSIKFVELVASNMLAVTNLAICVNLALIIYGHRNVSR-VKNLGSPKLMMMFLTFSIMATVTSVPLWDTLMITGSHVLVVGSSTGETTWVIFSQYSLEFIAGIVMVGIAIFLAVYRLPEMIEVWKLHRRIRFYFGLTLIAILNNLCVAVGGTLIVFDQCE 170
            +CW  +    L+K+ KF+EL + NMLA+TNLAIC+NLAL++  H +    V +L SP L+++ L  SI A   + P W+ ++++G+       +   + W+  S++ LEF  GI M  I  +L ++R+ E+ E WK+H RIR+YFGLTLIA   NL + + G + +    E
Sbjct:    8 VCWTGANLIKLIKTFKFLELASVNMLAMTNLAICMNLALVVMSHGDQQPGVNSLSSPLLIVVSLVISIGAAAAAAPFWEFIILSGTGFFPETENQRGSDWITISRFYLEFFVGICMFVIVAWLLLFRMTEIKECWKMHARIRYYFGLTLIATGVNLILGICGVIYLIGDRE 178          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig15707.3719.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 16
Match NameE-valueIdentityDescription
D8LNN1_ECTSI8.750e-4746.91Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A6H5K8K6_9PHAE7.170e-4241.75Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FTK5_ECTSI1.960e-3941.75Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JWL8_9PHAE2.570e-3940.93Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KRY2_9PHAE3.540e-3942.26Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LNN2_ECTSI8.670e-3942.77Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D8LNP0_ECTSI1.320e-3840.72Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
D7FTK4_ECTSI2.850e-3841.24Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D8LNM4_ECTSI1.270e-3744.24Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D8LNM5_ECTSI1.510e-2938.60Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 62..89
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 167..193
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..19
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 43..61
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 90..108
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 20..42
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 129..139
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 140..166
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 109..128
NoneNo IPR availableTMHMMTMhelixcoord: 62..84
NoneNo IPR availableTMHMMTMhelixcoord: 142..164
NoneNo IPR availableTMHMMTMhelixcoord: 99..121
NoneNo IPR availableTMHMMTMhelixcoord: 20..42

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig15707contigH-elongata_contig15707:1547..4593 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig15707.3719.1mRNA_H-elongata_contig15707.3719.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig15707 1538..4593 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig15707.3719.1 ID=prot_H-elongata_contig15707.3719.1|Name=mRNA_H-elongata_contig15707.3719.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=193bp
MCWAQSRTTGLVKSIKFVELVASNMLAVTNLAICVNLALIIYGHRNVSRV
KNLGSPKLMMMFLTFSIMATVTSVPLWDTLMITGSHVLVVGSSTGETTWV
IFSQYSLEFIAGIVMVGIAIFLAVYRLPEMIEVWKLHRRIRFYFGLTLIA
ILNNLCVAVGGTLIVFDQCEAILMSFAFSCRNVHIALDTIVLY
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