prot_H-elongata_contig156793.3703.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_H-elongata_contig156793.3703.1
Unique Name	prot_H-elongata_contig156793.3703.1
Type	polypeptide
Organism	Himanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length	198

Homology

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BLAST of mRNA_H-elongata_contig156793.3703.1 vs. uniprot
Match: A0A6H5JWI1_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWI1_9PHAE)

HSP 1 Score: 154 bits (388), Expect = 1.440e-42
Identity = 108/202 (53.47%), Postives = 137/202 (67.82%), Query Frame = 0

Query:    3 YGVKDNEHANVWKRLHKEAVKIALLSRKDKSSTXXXXXXXXXXXXXXXXXXXXXXXXXSRVGGFMAA-------ARLAGRAPTQQVGRGADDSTTSLIINSVRPEVEAYQAAPGMKINEEGKVGNASSWMYLDPLEFWRVRTADSLHLSSLARRMLVIPATQTESKRLFSCAGNIVTKNRNKLASTAVELLVLLRLAWGVVD 197
            YGV ++E A+VWK + +EAVKIA+ +R  ++S         XXXXXXXXXXXXXXXXX                A+  G A T Q+  GAD S   LI +SVR E+ A++ + G+K+ EE K G   + +YLDPL++WRVR AD  HL++LARR+L IPATQ ES+RLFSCAGNIVTKNRN LA T VELLVLLR +W +V+
Sbjct:   93 YGVDEDEKADVWKLVEEEAVKIAVETRNSENSQRASSQQGPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAQAVGGARTPQLDEGADSSFVRLITSSVRVELTAFKVSTGIKMYEEDKEG---AKVYLDPLDWWRVRCADFPHLANLARRVLAIPATQAESERLFSCAGNIVTKNRNNLAPTTVELLVLLRHSWKIVE 291

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BLAST of mRNA_H-elongata_contig156793.3703.1 vs. uniprot
Match: A0A6H5JPB0_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPB0_9PHAE)

HSP 1 Score: 88.2 bits (217), Expect = 4.920e-18
Identity = 42/61 (68.85%), Postives = 51/61 (83.61%), Query Frame = 0

Query:  137 TADSLHLSSLARRMLVIPATQTESKRLFSCAGNIVTKNRNKLASTAVELLVLLRLAWGVVD 197
            + D  HL++LARR+L IPATQ +S+RLFSCAGNIVTKNRN LA T VELLVLLR +W +V+
Sbjct:  151 STDFPHLANLARRVLAIPATQAKSERLFSCAGNIVTKNRNNLAPTTVELLVLLRHSWKIVE 211

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BLAST of mRNA_H-elongata_contig156793.3703.1 vs. uniprot
Match: A0A6H5KUY5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KUY5_9PHAE)

HSP 1 Score: 72.4 bits (176), Expect = 2.080e-11
Identity = 49/162 (30.25%), Postives = 75/162 (46.30%), Query Frame = 0

Query:    3 YGVKDNEHANVWKRLHKEAVKIALLS-RKDKSSTXXXXXXXXXXXXXXXXXXXXXXXXXSRVGGFMAAARLAGRAPTQQVGRGADDSTTSLIINSVRPEVEAYQAAPGMKINEEGKVGNASSWMYLDPLEFWRVRTADSLHLSSLARRMLVIPATQTESKRL 163
            YG++  EHA+VW+ +  +AV IA      D ++T                         +R+  F AAA     A     G    D     + + V  EV ++Q  PG+ I   G  G     +Y DPL++WR R  +  HL++LARR+L IP++Q  S+R+
Sbjct:  391 YGIRQAEHASVWRAVATKAVDIAAEKFSSDNTATSGSAPAAQPVGTPPVAPGGQGAPKRARLSAFEAAAAAHAGAAASSAGGQTLDEKREQLASVVDLEVASFQTTPGISIWYWGTDGKK---VYNDPLDWWRTRQMEFPHLAALARRVLAIPSSQAHSERV 549

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BLAST of mRNA_H-elongata_contig156793.3703.1 vs. uniprot
Match: UPI001C9A9669 (E3 SUMO-protein ligase ZBED1-like n=2 Tax=Colletes gigas TaxID=935657 RepID=UPI001C9A9669)

HSP 1 Score: 68.9 bits (167), Expect = 3.100e-10
Identity = 37/95 (38.95%), Postives = 51/95 (53.68%), Query Frame = 0

Query:   95 NSVRPEVEAYQAAPGMKINEEGKVGNASSWMYLDPLEFWRVRTADSLHLSSLARRMLVIPATQTESKRLFSCAGNIVTKNRNKLASTAVELLVLL 189
            N V  ++E Y   P ++ +             L+P E+W+ RT     +S +A++ L IPAT   S+R FSCAGNIVTK RN+L    V  LV L
Sbjct:  394 NDVYIQIETYMTEPQLRFD-------------LNPFEWWKARTNKYPAISEVAKKYLTIPATSAMSERCFSCAGNIVTKKRNRLLPENVNTLVFL 475

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BLAST of mRNA_H-elongata_contig156793.3703.1 vs. uniprot
Match: UPI0008114DE5 (zinc finger BED domain-containing protein 1-like n=1 Tax=Rhagoletis zephyria TaxID=28612 RepID=UPI0008114DE5)

HSP 1 Score: 65.5 bits (158), Expect = 4.380e-9
Identity = 30/69 (43.48%), Postives = 46/69 (66.67%), Query Frame = 0

Query:  128 DPLEFWRVRTADSLHLSSLARRMLVIPATQTESKRLFSCAGNIVTKNRNKLASTAVELLVLL-RLAWGV 195
            DPLE+W+ RT+D  HL  LA R L IPAT +ES+R+FS AG +++  R +L    V +L+ + + +W +
Sbjct:  332 DPLEYWKTRTSDMRHLQILALRYLCIPATSSESERMFSKAGAVISDRRTRLKEKNVNMLLFINKNSWMI 400

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BLAST of mRNA_H-elongata_contig156793.3703.1 vs. uniprot
Match: UPI001781ECFA (zinc finger BED domain-containing protein 1-like n=1 Tax=Rhagoletis pomonella TaxID=28610 RepID=UPI001781ECFA)

HSP 1 Score: 65.5 bits (158), Expect = 5.040e-9
Identity = 30/69 (43.48%), Postives = 46/69 (66.67%), Query Frame = 0

Query:  128 DPLEFWRVRTADSLHLSSLARRMLVIPATQTESKRLFSCAGNIVTKNRNKLASTAVELLVLL-RLAWGV 195
            DPLE+W+ RT+D  HL  LA R L IPAT +ES+R+FS AG +++  R +L    V +L+ + + +W +
Sbjct:  488 DPLEYWKTRTSDMRHLQILALRYLCIPATSSESERMFSKAGAVISDRRTRLKEKNVNMLLFINKNSWMI 556

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BLAST of mRNA_H-elongata_contig156793.3703.1 vs. uniprot
Match: UPI001C8A52CE (zinc finger BED domain-containing protein 4-like n=1 Tax=Drosophila bipectinata TaxID=42026 RepID=UPI001C8A52CE)

HSP 1 Score: 64.3 bits (155), Expect = 6.870e-9
Identity = 27/70 (38.57%), Postives = 45/70 (64.29%), Query Frame = 0

Query:  128 DPLEFWRVRTADSLHLSSLARRMLVIPATQTESKRLFSCAGNIVTKNRNKLASTAVELLVLLRLAWGVVD 197
            +PLE+WR   +D   L+ LA++ L +PAT TES+R+FS AG I+++ R+ L    V+ L+ +   W + +
Sbjct:  210 NPLEYWRSNESDQPALAKLAKKALCVPATSTESERMFSKAGQIISERRSSLKPNIVDQLLFINKNWWITE 279

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BLAST of mRNA_H-elongata_contig156793.3703.1 vs. uniprot
Match: UPI0008113823 (zinc finger BED domain-containing protein 1-like n=1 Tax=Rhagoletis zephyria TaxID=28612 RepID=UPI0008113823)

HSP 1 Score: 64.7 bits (156), Expect = 7.710e-9
Identity = 30/69 (43.48%), Postives = 45/69 (65.22%), Query Frame = 0

Query:  128 DPLEFWRVRTADSLHLSSLARRMLVIPATQTESKRLFSCAGNIVTKNRNKLASTAVELLVLL-RLAWGV 195
            DPLEFW+ RT+D  HL  LA R L IPAT +ES+R+FS AG +++    +L    V +L+ + + +W +
Sbjct:  308 DPLEFWKTRTSDMRHLQILALRYLCIPATSSESERMFSKAGAVISDRHTRLKEKNVSMLLFINKNSWMI 376

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BLAST of mRNA_H-elongata_contig156793.3703.1 vs. uniprot
Match: A0A6J8CHD8_MYTCO (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Mytilus coruscus TaxID=42192 RepID=A0A6J8CHD8_MYTCO)

HSP 1 Score: 63.2 bits (152), Expect = 2.760e-8
Identity = 29/62 (46.77%), Postives = 43/62 (69.35%), Query Frame = 0

Query:  128 DPLEFWRVRTADSLHLSSLARRMLVIPATQTESKRLFSCAGNIVTKNRNKLASTAVELLVLL 189
            +PLE+W+        LS LAR+ L IPAT   S+R+FSCAG I TK RN+L+S+ ++ +++L
Sbjct:  335 NPLEWWKENNCKFPRLSVLARQYLSIPATSVPSERIFSCAGLIATKLRNRLSSSVIDQIIIL 396

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BLAST of mRNA_H-elongata_contig156793.3703.1 vs. uniprot
Match: A0A154PK43_DUFNO (Zinc finger BED domain-containing protein 4 n=1 Tax=Dufourea novaeangliae TaxID=178035 RepID=A0A154PK43_DUFNO)

HSP 1 Score: 62.8 bits (151), Expect = 3.770e-8
Identity = 34/108 (31.48%), Postives = 58/108 (53.70%), Query Frame = 0

Query:   86 DDSTTSLIINSVRPEVEAYQAAPGMKINEEGKVGN----ASSWMYLDPLEFWRVRTADSLHLSSLARRMLVIPATQTESKRLFSCAGNIVTKNRNKLASTAVELLVLL 189
            DD + S   +  +  V A+      +++E  ++ N        +  DP+E+W++       LS LA+++L  PAT   S+R+FS AGNIV+K RN+L  + V  ++ L
Sbjct:  302 DDESISSFWSDFKTMVSAHNCCNTDELSEVAELDNYLKERIEVLESDPVEYWKINAIRYPKLSKLAQKLLCCPATSVPSERIFSKAGNIVSKKRNRLKDSTVNKMLFL 409

The following BLAST results are available for this feature:

BLAST of mRNA_H-elongata_contig156793.3703.1 vs. uniprot

BLAST of mRNA_H-elongata_contig156793.3703.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A6H5JWI1_9PHAE	1.440e-42	53.47	Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ec...	[more]
A0A6H5JPB0_9PHAE	4.920e-18	68.85	Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ec...	[more]
A0A6H5KUY5_9PHAE	2.080e-11	30.25	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
UPI001C9A9669	3.100e-10	38.95	E3 SUMO-protein ligase ZBED1-like n=2 Tax=Colletes...	[more]
UPI0008114DE5	4.380e-9	43.48	zinc finger BED domain-containing protein 1-like n...	[more]
UPI001781ECFA	5.040e-9	43.48	zinc finger BED domain-containing protein 1-like n...	[more]
UPI001C8A52CE	6.870e-9	38.57	zinc finger BED domain-containing protein 4-like n...	[more]
UPI0008113823	7.710e-9	43.48	zinc finger BED domain-containing protein 1-like n...	[more]
A0A6J8CHD8_MYTCO	2.760e-8	46.77	Dimer_Tnp_hAT domain-containing protein n=1 Tax=My...	[more]
A0A154PK43_DUFNO	3.770e-8	31.48	Zinc finger BED domain-containing protein 4 n=1 Ta...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR008906	HAT, C-terminal dimerisation domain	PFAM	PF05699	Dimer_Tnp_hAT	coord: 111..190 e-value: 3.3E-12 score: 46.0
None	No IPR available	PANTHER	PTHR47611	FAMILY NOT NAMED	coord: 127..190
IPR012337	Ribonuclease H-like superfamily	SUPERFAMILY	53098	Ribonuclease H-like	coord: 127..191

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-elongata_contig156793	contig	H-elongata_contig156793:452..1045 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_H-elongata_contig156793.3703.1	mRNA_H-elongata_contig156793.3703.1	Himanthalia elongata Himel1 dioecious	mRNA	H-elongata_contig156793 84..1403 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_H-elongata_contig156793.3703.1 ID=prot_H-elongata_contig156793.3703.1|Name=mRNA_H-elongata_contig156793.3703.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=198bp
MPYGVKDNEHANVWKRLHKEAVKIALLSRKDKSSTGGSSQQLATAAPSGA
ASGGSSSKKRSRVGGFMAAARLAGRAPTQQVGRGADDSTTSLIINSVRPE
VEAYQAAPGMKINEEGKVGNASSWMYLDPLEFWRVRTADSLHLSSLARRM
LVIPATQTESKRLFSCAGNIVTKNRNKLASTAVELLVLLRLAWGVVD*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR008906	HATC_C_dom
IPR012337	RNaseH-like_sf