prot_H-elongata_contig15660.3690.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig15660.3690.1
Unique Nameprot_H-elongata_contig15660.3690.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length174
Homology
[Close]
BLAST of mRNA_H-elongata_contig15660.3690.1 vs. uniprot
Match: A0A6H5KP87_9PHAE (Endo/exonuclease/phosphatase domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KP87_9PHAE)

HSP 1 Score: 109 bits (272), Expect = 1.880e-26
Identity = 76/180 (42.22%), Postives = 107/180 (59.44%), Query Frame = 0 
Query:    1 DVISLQETRRSGHSAFTYAGYSVYCS-CECGRENGGKKGQGRVGLAVRTSVTRAVCPQ----KFINDHFLKVPLELRGRAKAVTCFVTYAPIE-AQNSSN-----KHSFWTTLDKAMEEIPRHEQLLVLMDTNARTGRRDRGQLGSKDRNIMGAYGRGTLNDNGELLLSFANNHDLALMN 169
            DVI LQETRR+G  A T+ GY +  S    G ++  K+G   VG+A++ ++  +V       + I+   +KV L++ GR   VT  V YAP E A+N++      K SFWT LD  + E+   + L+VLMD NARTGRR   + G  D  IMGAYGR  +N+NGE LL  A ++ L+L+N
Sbjct:   13 DVIGLQETRRAGQGAITHDGYVIIWSGARAGTKD--KRGVHGVGIAIKETMWDSVGEGGRTVECISPRLMKVRLQI-GRTCGVTFVVGYAPTETARNTAGGDVNAKDSFWTALDAEIREVHSRDHLVVLMDANARTGRR---RDGCCDAKIMGAYGRDIMNNNGERLLGLAADNRLSLIN 186
[Close]
BLAST of mRNA_H-elongata_contig15660.3690.1 vs. uniprot
Match: A0A6H5K319_9PHAE (Reverse transcriptase domain-containing protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K319_9PHAE)

HSP 1 Score: 114 bits (286), Expect = 2.360e-26
Identity = 63/168 (37.50%), Postives = 96/168 (57.14%), Query Frame = 0 
Query:    3 ISLQETRRSGHSAFTYAGYSVYCSCECGRENGGKKGQGRVGLAVRTSVTRAV-CPQKFINDHFLKVPLELRGRAKAVTCFVTYAPIEAQNSSNKHSFWTTLDKAMEEIPRHEQLLVLMDTNARTGRRDRGQLGSKDRNIMGAYGRGTLNDNGELLLSFANNHDLALMN 169
            + LQE RR G + F  +G+ V+    CG + GG  G   VG+AV  ++ ++     +++++  + +  E+ G   AVT    YAP +   + +KH FW  LD  +  IP  E L VLMD NA+TG    G +  ++   MG YGR  LN+NGELLL+FA ++ LA++N
Sbjct:  342 VGLQEVRRPGRTEFAASGFRVFT---CGTDKGGTHG---VGIAVEETLCKSSQYTTEYVDERLMAMRFEMMGHRGAVTFVAAYAPTDVATTESKHMFWEKLDSLVRRIPAKEYLFVLMDANAQTG----GGIAGENEGTMGEYGRNELNENGELLLTFATDNRLAVLN 499
[Close]
BLAST of mRNA_H-elongata_contig15660.3690.1 vs. uniprot
Match: A0A6H5L3X5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L3X5_9PHAE)

HSP 1 Score: 110 bits (275), Expect = 5.080e-26
Identity = 62/168 (36.90%), Postives = 94/168 (55.95%), Query Frame = 0 
Query:    3 ISLQETRRSGHSAFTYAGYSVYCSCECGRENGGKKGQGRVGLAVRTSVTRAV-CPQKFINDHFLKVPLELRGRAKAVTCFVTYAPIEAQNSSNKHSFWTTLDKAMEEIPRHEQLLVLMDTNARTGRRDRGQLGSKDRNIMGAYGRGTLNDNGELLLSFANNHDLALMN 169
            + LQE RR G + FT +G+ V+    CG + GG  G   VG+AV  ++ +A     +++++  + +  E+ G   AV     YAP +   + +K  FW  LD  +  IP  E + VLMD NA+TG    G +  ++   MG YGR  LNDNG LLL+FA ++ LA++N
Sbjct:  141 VGLQEVRRPGRTEFTASGFRVFT---CGTDKGGTHG---VGIAVEEALCKASQYTTEYVDERLMAMRFEMTGHRGAVNFVAAYAPTDVATADSKRMFWEKLDSLVRRIPAKECVFVLMDANAQTG----GGIAGENEGTMGEYGRNELNDNGRLLLTFATDNRLAVLN 298
[Close]
BLAST of mRNA_H-elongata_contig15660.3690.1 vs. uniprot
Match: A0A6H5L660_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L660_9PHAE)

HSP 1 Score: 110 bits (275), Expect = 9.120e-26
Identity = 72/180 (40.00%), Postives = 101/180 (56.11%), Query Frame = 0 
Query:    1 DVISLQETRRSGHSAFTYAGYSVYCS-CECGRENGGKKGQGRVGLAVRTSVTRAVCPQ----KFINDHFLKVPLELRGRAKAVTCFVTYAPIEAQNSSN------KHSFWTTLDKAMEEIPRHEQLLVLMDTNARTGRRDRGQLGSKDRNIMGAYGRGTLNDNGELLLSFANNHDLALMN 169
            DVI LQETRR G  +  + GY +  S    G ++  K+G   VG+A++ ++  +V  +    + I    +KV L + GR   +T  V YAP E   ++       K SFWT LD  + E+  H+ L+VLMD NARTGRR   + G  D  IMG YGR  +N+NGE LL  A+N+ L+L N
Sbjct:  183 DVIGLQETRREGQGSIAHDGYVIIWSGARAGTKD--KRGVHGVGIAIKETMWESVGEEGRKVECIGPRLMKVRLRI-GRTCGITFVVRYAPTETVRTTAGGDINAKDSFWTALDAVIREVHSHDHLVVLMDANARTGRR---RDGCCDAKIMGVYGRDIMNNNGERLLGLASNNQLSLTN 356
[Close]
BLAST of mRNA_H-elongata_contig15660.3690.1 vs. uniprot
Match: A0A6H5K7U5_9PHAE (Reverse transcriptase domain-containing protein n=9 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K7U5_9PHAE)

HSP 1 Score: 112 bits (281), Expect = 1.080e-25
Identity = 62/168 (36.90%), Postives = 95/168 (56.55%), Query Frame = 0 
Query:    3 ISLQETRRSGHSAFTYAGYSVYCSCECGRENGGKKGQGRVGLAVRTSVTRAV-CPQKFINDHFLKVPLELRGRAKAVTCFVTYAPIEAQNSSNKHSFWTTLDKAMEEIPRHEQLLVLMDTNARTGRRDRGQLGSKDRNIMGAYGRGTLNDNGELLLSFANNHDLALMN 169
            + LQE RR G + F  +G+ V+    CG + GG  G   VG+AV  ++ ++     +++++  + +  E+ G   AVT    YAP +   + +KH FW  LD  +   P  E L VLMD NA+TG    G +  ++   MG YGR  LN+NGELLL+FA ++ LA++N
Sbjct:   55 VGLQEVRRPGRTEFAASGFRVFT---CGTDKGGTHG---VGIAVEETLCKSSQYTTEYVDERLMAMRFEMMGHRGAVTFVAAYAPTDVATTESKHMFWEKLDSLVRRTPAKEYLFVLMDANAQTG----GGIAGENEGTMGEYGRNELNENGELLLTFATDNRLAVLN 212
[Close]
BLAST of mRNA_H-elongata_contig15660.3690.1 vs. uniprot
Match: A0A6H5JLM6_9PHAE (Reverse transcriptase domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JLM6_9PHAE)

HSP 1 Score: 112 bits (281), Expect = 1.120e-25
Identity = 62/168 (36.90%), Postives = 95/168 (56.55%), Query Frame = 0 
Query:    3 ISLQETRRSGHSAFTYAGYSVYCSCECGRENGGKKGQGRVGLAVRTSVTRAV-CPQKFINDHFLKVPLELRGRAKAVTCFVTYAPIEAQNSSNKHSFWTTLDKAMEEIPRHEQLLVLMDTNARTGRRDRGQLGSKDRNIMGAYGRGTLNDNGELLLSFANNHDLALMN 169
            + LQE RR G + F  +G+ V+    CG + GG  G   VG+AV  ++ ++     +++++  + +  E+ G   AVT    YAP +   + +KH FW  LD  +   P  E L VLMD NA+TG    G +  ++   MG YGR  LN+NGELLL+FA ++ LA++N
Sbjct:  546 VGLQEVRRPGRTEFAASGFRVFT---CGTDKGGTHG---VGIAVEETLCKSSQYTTEYVDERLMAMRFEMMGHRGAVTFVAAYAPTDVATTESKHMFWEKLDSLVRRTPAKEYLFVLMDANAQTG----GGIAGENEGTMGEYGRNELNENGELLLTFATDNRLAVLN 703
[Close]
BLAST of mRNA_H-elongata_contig15660.3690.1 vs. uniprot
Match: A0A6H5K3Q1_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K3Q1_9PHAE)

HSP 1 Score: 112 bits (280), Expect = 1.170e-25
Identity = 73/180 (40.56%), Postives = 106/180 (58.89%), Query Frame = 0 
Query:    1 DVISLQETRRSGHSAFTYAGYSVYCS-CECGRENGGKKGQGRVGLAVRTSVTRAVCPQ----KFINDHFLKVPLELRGRAKAVTCFVTYAPIEAQNSSN------KHSFWTTLDKAMEEIPRHEQLLVLMDTNARTGRRDRGQLGSKDRNIMGAYGRGTLNDNGELLLSFANNHDLALMN 169
            DVI LQETRR+G  +  + GY +  S    G ++  K+G   VG+A++ ++  +V  +    + I+   +KV L++ GR   VT  V YAP E   ++       K SFWT LD A+ E+   + L+VLMD NARTGRR +G   +K   IMGAYGR  +N+NGE LL  A+++ L+L N
Sbjct:  210 DVIGLQETRRAGQGSIAHDGYVIIWSGARAGTKD--KRGVHGVGIAIKEAMWESVGEEGRTVECISPRLMKVRLQI-GRTCGVTFLVGYAPTETVRTTEGCDVNAKDSFWTALDAAIREVHSRDHLVVLMDANARTGRRRKGCCDAK---IMGAYGRDIMNNNGERLLGLASDNQLSLTN 383
[Close]
BLAST of mRNA_H-elongata_contig15660.3690.1 vs. uniprot
Match: A0A6H5K9G5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K9G5_9PHAE)

HSP 1 Score: 112 bits (280), Expect = 1.290e-25
Identity = 63/168 (37.50%), Postives = 94/168 (55.95%), Query Frame = 0 
Query:    3 ISLQETRRSGHSAFTYAGYSVYCSCECGRENGGKKGQGRVGLAVRTSVTRAV-CPQKFINDHFLKVPLELRGRAKAVTCFVTYAPIEAQNSSNKHSFWTTLDKAMEEIPRHEQLLVLMDTNARTGRRDRGQLGSKDRNIMGAYGRGTLNDNGELLLSFANNHDLALMN 169
            + LQE RR G + FT +G+ V+    CG + GG  G   VG+AV  ++ +A     +++++  + +  E+ G   AV     YAP +   + +K  FW  LD  +  IP  E L VLMD NA+TG    G +  ++   MG YGR  LNDNG LLL+FA ++ LA++N
Sbjct:   80 VGLQEVRRPGRTEFTASGFRVFT---CGTDKGGTHG---VGIAVEEALCKASQYTTEYVDERLMAMRFEMTGHRGAVNFVAAYAPTDVATADSKRMFWEKLDSLVRRIPAKEYLFVLMDANAQTG----GGIAGENERTMGEYGRNELNDNGRLLLTFATDNRLAVLN 237
[Close]
BLAST of mRNA_H-elongata_contig15660.3690.1 vs. uniprot
Match: A0A6H5KQZ7_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQZ7_9PHAE)

HSP 1 Score: 112 bits (280), Expect = 1.330e-25
Identity = 62/168 (36.90%), Postives = 94/168 (55.95%), Query Frame = 0 
Query:    3 ISLQETRRSGHSAFTYAGYSVYCSCECGRENGGKKGQGRVGLAVRTSVTRAV-CPQKFINDHFLKVPLELRGRAKAVTCFVTYAPIEAQNSSNKHSFWTTLDKAMEEIPRHEQLLVLMDTNARTGRRDRGQLGSKDRNIMGAYGRGTLNDNGELLLSFANNHDLALMN 169
            + LQE RR G + F  +G+ V+    CG + GG  G   VG+AV  ++ ++     +++++  + +  E+ G   AVT    YAP +   + +KH FW  LD  +   P  E L VLMD NA+TG    G +  ++   MG YGR  LNDNG LLL+FA ++ LA++N
Sbjct:  110 VGLQEVRRPGRTEFAASGFRVFT---CGTDKGGTHG---VGIAVEETLCKSSQYTTEYVDERLMAMRFEMMGHRGAVTFVAAYAPTDVATTESKHMFWEKLDSLVRRTPAKEYLFVLMDANAQTG----GGIAGENERTMGEYGRNELNDNGRLLLTFATDNRLAVLN 267
[Close]
BLAST of mRNA_H-elongata_contig15660.3690.1 vs. uniprot
Match: A0A6H5K3U7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K3U7_9PHAE)

HSP 1 Score: 107 bits (266), Expect = 1.840e-25
Identity = 59/168 (35.12%), Postives = 93/168 (55.36%), Query Frame = 0 
Query:    3 ISLQETRRSGHSAFTYAGYSVYCSCECGRENGGKKGQGRVGLAVRTSVTRAV-CPQKFINDHFLKVPLELRGRAKAVTCFVTYAPIEAQNSSNKHSFWTTLDKAMEEIPRHEQLLVLMDTNARTGRRDRGQLGSKDRNIMGAYGRGTLNDNGELLLSFANNHDLALMN 169
            + LQE R+ G + FT +G+ V+    CG + GG  G   VG+ V  ++ +A     +++++  + +  E+ G   AV     +AP +   + +K  FW  LD  +  +P  E L VLMD NA+TG    G +  ++   MG YGR  LNDNG LLL+FA ++ LA++N
Sbjct:   19 VGLQEVRKPGRTEFTASGFRVFT---CGTDKGGTHG---VGITVEEALCKASQYTMEYVDERLMAMRFEMTGHRGAVNFVAAHAPTDVATADSKRMFWEKLDSLVRRVPAKECLFVLMDANAQTG----GGIAGENEGTMGEYGRNELNDNGRLLLTFATDNRLAVLN 176
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig15660.3690.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KP87_9PHAE1.880e-2642.22Endo/exonuclease/phosphatase domain-containing pro... [more]
A0A6H5K319_9PHAE2.360e-2637.50Reverse transcriptase domain-containing protein n=... [more]
A0A6H5L3X5_9PHAE5.080e-2636.90Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5L660_9PHAE9.120e-2640.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K7U5_9PHAE1.080e-2536.90Reverse transcriptase domain-containing protein n=... [more]
A0A6H5JLM6_9PHAE1.120e-2536.90Reverse transcriptase domain-containing protein n=... [more]
A0A6H5K3Q1_9PHAE1.170e-2540.56Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
A0A6H5K9G5_9PHAE1.290e-2537.50Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KQZ7_9PHAE1.330e-2536.90Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
A0A6H5K3U7_9PHAE1.840e-2535.12Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036691Endonuclease/exonuclease/phosphatase superfamilyGENE3D3.60.10.10coord: 1..172
e-value: 5.9E-17
score: 63.9
IPR036691Endonuclease/exonuclease/phosphatase superfamilySUPERFAMILY56219DNase I-likecoord: 1..129

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig15660contigH-elongata_contig15660:2547..3068 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig15660.3690.1mRNA_H-elongata_contig15660.3690.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig15660 2547..3068 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig15660.3690.1 ID=prot_H-elongata_contig15660.3690.1|Name=mRNA_H-elongata_contig15660.3690.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=174bp
DVISLQETRRSGHSAFTYAGYSVYCSCECGRENGGKKGQGRVGLAVRTSV
TRAVCPQKFINDHFLKVPLELRGRAKAVTCFVTYAPIEAQNSSNKHSFWT
TLDKAMEEIPRHEQLLVLMDTNARTGRRDRGQLGSKDRNIMGAYGRGTLN
DNGELLLSFANNHDLALMNASMI*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036691Endo/exonu/phosph_ase_sf