prot_H-elongata_contig156362.3675.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig156362.3675.1
Unique Nameprot_H-elongata_contig156362.3675.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length89
Homology
BLAST of mRNA_H-elongata_contig156362.3675.1 vs. uniprot
Match: D8LMN8_ECTSI (WD repeat protein (Partial) (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LMN8_ECTSI)

HSP 1 Score: 169 bits (427), Expect = 8.990e-47
Identity = 78/85 (91.76%), Postives = 81/85 (95.29%), Query Frame = 0
Query:    1 GELVVGGRASRVMRGHNGDVLDLSWSPNAFLLSAGRDGSLRLWHPGRLGCVHLFPQTGPATPTSCAFHPRLENSFVTGGEDGKVR 85
            GELVVGGRASRVMRGHNGDV+DLSWS NAFLLSAGRDGSLRLWHP RLGCVHLFPQTG ATPTSC+F+PRLENSF TGGEDGKVR
Sbjct:  860 GELVVGGRASRVMRGHNGDVVDLSWSLNAFLLSAGRDGSLRLWHPARLGCVHLFPQTGAATPTSCSFNPRLENSFATGGEDGKVR 944          
BLAST of mRNA_H-elongata_contig156362.3675.1 vs. uniprot
Match: A0A6H5KWS7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KWS7_9PHAE)

HSP 1 Score: 168 bits (426), Expect = 1.230e-46
Identity = 77/85 (90.59%), Postives = 81/85 (95.29%), Query Frame = 0
Query:    1 GELVVGGRASRVMRGHNGDVLDLSWSPNAFLLSAGRDGSLRLWHPGRLGCVHLFPQTGPATPTSCAFHPRLENSFVTGGEDGKVR 85
            GELV+GGRASRVMRGHNGDV+DLSWS NAFLLSAGRDGSLRLWHP RLGCVHLFPQTG ATPTSC+F+PRLENSF TGGEDGKVR
Sbjct: 1147 GELVIGGRASRVMRGHNGDVVDLSWSLNAFLLSAGRDGSLRLWHPARLGCVHLFPQTGAATPTSCSFNPRLENSFATGGEDGKVR 1231          
BLAST of mRNA_H-elongata_contig156362.3675.1 vs. uniprot
Match: A0A4P9Y9H8_9FUNG (WD40-repeat-containing domain protein (Fragment) n=1 Tax=Piptocephalis cylindrospora TaxID=1907219 RepID=A0A4P9Y9H8_9FUNG)

HSP 1 Score: 81.6 bits (200), Expect = 4.640e-17
Identity = 36/75 (48.00%), Postives = 50/75 (66.67%), Query Frame = 0
Query:   11 RVMRGHNGDVLDLSWSPNAFLLSAGRDGSLRLWHPGRLGCVHLFPQTGPATPTSCAFHPRLENSFVTGGEDGKVR 85
            R   GH GDV+DL+WS N FLLSA  D ++RLWH  R  C+++FP   P   TS +FHP+ +  F++G  DG++R
Sbjct:   80 RRWEGHKGDVMDLAWSKNNFLLSASMDRTVRLWHVSRAACLYVFPH--PDFVTSVSFHPKDDRCFLSGSIDGRMR 152          
BLAST of mRNA_H-elongata_contig156362.3675.1 vs. uniprot
Match: A0A4U7L1T4_9BASI (Uncharacterized protein n=1 Tax=Sporisorium graminicola TaxID=280036 RepID=A0A4U7L1T4_9BASI)

HSP 1 Score: 84.0 bits (206), Expect = 6.030e-17
Identity = 43/77 (55.84%), Postives = 48/77 (62.34%), Query Frame = 0
Query:   12 VMRGHNGDVLDLSWSPNAFLLSAGRDGSLRLWHPGRLGCVHLFPQTGPATPTSCAFHPRLENSFVTGGEDGKVRRRN 88
            V  GH GDVLDLSWS N FLLS   D + RLWHP R  C+  F  T  AT +S  FHP  +  FVTGG DGK+R  N
Sbjct:  554 VFAGHTGDVLDLSWSKNNFLLSCSSDKTARLWHPNRSDCLCTF--TTSATVSSVDFHPVDDRFFVTGGLDGKLRLWN 628          
BLAST of mRNA_H-elongata_contig156362.3675.1 vs. uniprot
Match: V5GKH9_KALBG (Uncharacterized protein n=1 Tax=Kalmanozyma brasiliensis (strain GHG001) TaxID=1365824 RepID=V5GKH9_KALBG)

HSP 1 Score: 83.6 bits (205), Expect = 7.590e-17
Identity = 41/77 (53.25%), Postives = 49/77 (63.64%), Query Frame = 0
Query:   12 VMRGHNGDVLDLSWSPNAFLLSAGRDGSLRLWHPGRLGCVHLFPQTGPATPTSCAFHPRLENSFVTGGEDGKVRRRN 88
            V  GH+GD+LDLSWS N FLLS G D + +LWHP R  C+  F  T  A  +S  FHP  +  FVTGG DGK+R  N
Sbjct:  154 VFAGHSGDILDLSWSKNNFLLSCGSDKTAKLWHPNREDCLCTF--TTSAVVSSIDFHPTDDRFFVTGGLDGKLRLWN 228          
BLAST of mRNA_H-elongata_contig156362.3675.1 vs. uniprot
Match: A0A077R3E4_9BASI (Wd repeat protein n=1 Tax=Melanopsichium pennsylvanicum 4 TaxID=1398559 RepID=A0A077R3E4_9BASI)

HSP 1 Score: 83.6 bits (205), Expect = 8.240e-17
Identity = 41/78 (52.56%), Postives = 49/78 (62.82%), Query Frame = 0
Query:   11 RVMRGHNGDVLDLSWSPNAFLLSAGRDGSLRLWHPGRLGCVHLFPQTGPATPTSCAFHPRLENSFVTGGEDGKVRRRN 88
            R+  GH GDVLDLSWS N FLLS   D + +LWHP R GC+  F  +  AT +S  FHP  +  FVTGG D K+R  N
Sbjct:  570 RIFSGHTGDVLDLSWSKNNFLLSCSSDKTAKLWHPNRTGCLCTFSTS--ATVSSVDFHPTDDRFFVTGGLDCKLRLWN 645          
BLAST of mRNA_H-elongata_contig156362.3675.1 vs. uniprot
Match: A0A5C3DRX1_9BASI (Uncharacterized protein n=1 Tax=Ustilago trichophora TaxID=86804 RepID=A0A5C3DRX1_9BASI)

HSP 1 Score: 82.0 bits (201), Expect = 2.860e-16
Identity = 40/78 (51.28%), Postives = 49/78 (62.82%), Query Frame = 0
Query:   11 RVMRGHNGDVLDLSWSPNAFLLSAGRDGSLRLWHPGRLGCVHLFPQTGPATPTSCAFHPRLENSFVTGGEDGKVRRRN 88
            R+  GH+GDVLDLSWS N FLLS   D + +LWHP R  C+  F  +  A  +S  FHP  +  FVTGG DGK+R  N
Sbjct:  575 RIFAGHSGDVLDLSWSKNNFLLSCSSDKTAKLWHPNRSDCLCTFSTS--AIVSSIDFHPTDDRFFVTGGLDGKLRLWN 650          
BLAST of mRNA_H-elongata_contig156362.3675.1 vs. uniprot
Match: M9M194_PSEA3 (WD40 repeat-containing protein n=3 Tax=Moesziomyces TaxID=63261 RepID=M9M194_PSEA3)

HSP 1 Score: 82.0 bits (201), Expect = 2.870e-16
Identity = 41/78 (52.56%), Postives = 48/78 (61.54%), Query Frame = 0
Query:   11 RVMRGHNGDVLDLSWSPNAFLLSAGRDGSLRLWHPGRLGCVHLFPQTGPATPTSCAFHPRLENSFVTGGEDGKVRRRN 88
            RV  GH GDV+DLSWS N FLLS   D + +LWHP R  C+  F     A  +S  FHPR +  FVTGG DGK+R  N
Sbjct:  596 RVFAGHVGDVMDLSWSKNNFLLSCSSDKTAKLWHPNRAECLCTFSTA--AIVSSVDFHPRDDRFFVTGGLDGKLRLWN 671          
BLAST of mRNA_H-elongata_contig156362.3675.1 vs. uniprot
Match: E6ZKT8_SPORE (Uncharacterized protein n=2 Tax=Sporisorium reilianum TaxID=72558 RepID=E6ZKT8_SPORE)

HSP 1 Score: 81.6 bits (200), Expect = 3.870e-16
Identity = 42/77 (54.55%), Postives = 47/77 (61.04%), Query Frame = 0
Query:   12 VMRGHNGDVLDLSWSPNAFLLSAGRDGSLRLWHPGRLGCVHLFPQTGPATPTSCAFHPRLENSFVTGGEDGKVRRRN 88
            V  GH GDVLDLSWS N FLLS   D + RLWHP R  C+  F  T  A  +S  FHP  +  FVTGG DGK+R  N
Sbjct:  382 VFAGHTGDVLDLSWSKNNFLLSCSSDKTARLWHPNRSDCLCTF--TTSAIVSSVDFHPVDDRFFVTGGLDGKLRLWN 456          
BLAST of mRNA_H-elongata_contig156362.3675.1 vs. uniprot
Match: I2G540_USTH4 (Uncharacterized protein n=3 Tax=Ustilago TaxID=5269 RepID=I2G540_USTH4)

HSP 1 Score: 81.6 bits (200), Expect = 3.880e-16
Identity = 41/78 (52.56%), Postives = 48/78 (61.54%), Query Frame = 0
Query:   11 RVMRGHNGDVLDLSWSPNAFLLSAGRDGSLRLWHPGRLGCVHLFPQTGPATPTSCAFHPRLENSFVTGGEDGKVRRRN 88
            RV   H+GDVLDLSWS N FLLS   D + +LWHP R  C+  F     AT +S  FHP  +  FVTGG DGK+R  N
Sbjct:  413 RVFAAHSGDVLDLSWSKNNFLLSCSSDKTAKLWHPNRSECLCTFATA--ATVSSVDFHPTDDRFFVTGGLDGKLRLWN 488          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig156362.3675.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LMN8_ECTSI8.990e-4791.76WD repeat protein (Partial) (Fragment) n=1 Tax=Ect... [more]
A0A6H5KWS7_9PHAE1.230e-4690.59Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A4P9Y9H8_9FUNG4.640e-1748.00WD40-repeat-containing domain protein (Fragment) n... [more]
A0A4U7L1T4_9BASI6.030e-1755.84Uncharacterized protein n=1 Tax=Sporisorium gramin... [more]
V5GKH9_KALBG7.590e-1753.25Uncharacterized protein n=1 Tax=Kalmanozyma brasil... [more]
A0A077R3E4_9BASI8.240e-1752.56Wd repeat protein n=1 Tax=Melanopsichium pennsylva... [more]
A0A5C3DRX1_9BASI2.860e-1651.28Uncharacterized protein n=1 Tax=Ustilago trichopho... [more]
M9M194_PSEA32.870e-1652.56WD40 repeat-containing protein n=3 Tax=Moesziomyce... [more]
E6ZKT8_SPORE3.870e-1654.55Uncharacterized protein n=2 Tax=Sporisorium reilia... [more]
I2G540_USTH43.880e-1652.56Uncharacterized protein n=3 Tax=Ustilago TaxID=526... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001680WD40 repeatSMARTSM00320WD40_4coord: 6..44
e-value: 9.2E-8
score: 41.8
coord: 47..88
e-value: 3.3
score: 13.7
IPR001680WD40 repeatPFAMPF00400WD40coord: 10..43
e-value: 4.3E-7
score: 30.5
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 13..43
score: 13.316
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3D2.130.10.10coord: 3..86
e-value: 5.7E-17
score: 64.0
IPR040324WD repeat-containing protein WDR44/Dgr2PANTHERPTHR14221WD REPEAT DOMAIN 44coord: 11..85
IPR017986WD40-repeat-containing domainPROSITEPS50294WD_REPEATS_REGIONcoord: 13..88
score: 12.789
IPR036322WD40-repeat-containing domain superfamilySUPERFAMILY50978WD40 repeat-likecoord: 8..85

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig156362contigH-elongata_contig156362:283..549 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig156362.3675.1mRNA_H-elongata_contig156362.3675.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig156362 283..549 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig156362.3675.1 ID=prot_H-elongata_contig156362.3675.1|Name=mRNA_H-elongata_contig156362.3675.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=89bp
GELVVGGRASRVMRGHNGDVLDLSWSPNAFLLSAGRDGSLRLWHPGRLGC
VHLFPQTGPATPTSCAFHPRLENSFVTGGEDGKVRRRN*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001680WD40_repeat
IPR015943WD40/YVTN_repeat-like_dom_sf
IPR040324WDR44/Dgr2
IPR017986WD40_repeat_dom
IPR036322WD40_repeat_dom_sf