prot_H-elongata_contig156275.3669.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig156275.3669.1
Unique Nameprot_H-elongata_contig156275.3669.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length66
Homology
BLAST of mRNA_H-elongata_contig156275.3669.1 vs. uniprot
Match: D7G389_ECTSI (Ras-related protein Rab n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G389_ECTSI)

HSP 1 Score: 99.8 bits (247), Expect = 5.130e-24
Identity = 46/57 (80.70%), Postives = 49/57 (85.96%), Query Frame = 0
Query:    1 REALNWFCDRHGFAGWFETSAKLNINIDEASHFLVRKVLEKLPTSGHPSSRRLGMKV 57
            REAL WFCDRHGFAGWFETSAK NINIDE S FLV KVLE++P SGHPS R LGMK+
Sbjct:  206 REALTWFCDRHGFAGWFETSAKQNINIDEGSRFLVEKVLERIPASGHPSGR-LGMKL 261          
BLAST of mRNA_H-elongata_contig156275.3669.1 vs. uniprot
Match: UPI0004BD37B7 (ras-related protein Rab-32 n=1 Tax=Equus przewalskii TaxID=9798 RepID=UPI0004BD37B7)

HSP 1 Score: 60.1 bits (144), Expect = 4.340e-9
Identity = 28/54 (51.85%), Postives = 34/54 (62.96%), Query Frame = 0
Query:    4 LNWFCDRHGFAGWFETSAKLNINIDEASHFLVRKVLEKLPTSGHPSSRRLGMKV 57
            ++ FC  HGF GWFETSAK NINIDEA+ FLV  +LE       P+    G K+
Sbjct:  210 MDQFCKEHGFTGWFETSAKDNINIDEAARFLVENILENY--QSFPNEENDGSKI 261          
BLAST of mRNA_H-elongata_contig156275.3669.1 vs. uniprot
Match: A0A6V1S8I5_HETAK (Ras-related protein Rab n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1S8I5_HETAK)

HSP 1 Score: 59.3 bits (142), Expect = 4.570e-9
Identity = 26/48 (54.17%), Postives = 33/48 (68.75%), Query Frame = 0
Query:    4 LNWFCDRHGFAGWFETSAKLNINIDEASHFLVRKVLEKLPTSGHPSSR 51
            L+ FC  HGF GWF+TSA+LNINI++A  FLV  +LEK      P+ R
Sbjct:  140 LDQFCQEHGFIGWFDTSARLNINIEQACRFLVDNLLEKRDLLNPPAKR 187          
BLAST of mRNA_H-elongata_contig156275.3669.1 vs. uniprot
Match: F6UVE7_HORSE (Ras-related protein Rab n=2 Tax=Equus TaxID=9789 RepID=F6UVE7_HORSE)

HSP 1 Score: 60.1 bits (144), Expect = 5.070e-9
Identity = 28/54 (51.85%), Postives = 34/54 (62.96%), Query Frame = 0
Query:    4 LNWFCDRHGFAGWFETSAKLNINIDEASHFLVRKVLEKLPTSGHPSSRRLGMKV 57
            ++ FC  HGF GWFETSAK NINIDEA+ FLV  +LE       P+    G K+
Sbjct:  246 MDQFCKEHGFTGWFETSAKDNINIDEAARFLVENILENY--QSFPNEENDGSKI 297          
BLAST of mRNA_H-elongata_contig156275.3669.1 vs. uniprot
Match: UPI00033152C0 (ras-related protein Rab-32 n=1 Tax=Sorex araneus TaxID=42254 RepID=UPI00033152C0)

HSP 1 Score: 58.9 bits (141), Expect = 5.270e-9
Identity = 25/37 (67.57%), Postives = 30/37 (81.08%), Query Frame = 0
Query:    4 LNWFCDRHGFAGWFETSAKLNINIDEASHFLVRKVLE 40
            ++ FC  HGF+GWFETSAK NINIDEA+ FLV  +LE
Sbjct:  125 MDQFCKEHGFSGWFETSAKDNINIDEAARFLVENILE 161          
BLAST of mRNA_H-elongata_contig156275.3669.1 vs. uniprot
Match: A0A4U1FQJ1_MONMO (Uncharacterized protein (Fragment) n=3 Tax=Cetacea TaxID=9721 RepID=A0A4U1FQJ1_MONMO)

HSP 1 Score: 57.8 bits (138), Expect = 6.220e-9
Identity = 25/36 (69.44%), Postives = 28/36 (77.78%), Query Frame = 0
Query:    4 LNWFCDRHGFAGWFETSAKLNINIDEASHFLVRKVL 39
            ++ FC  HGF GWFETSAK NINIDEAS FLV  +L
Sbjct:   74 MDQFCKEHGFTGWFETSAKDNINIDEASRFLVENIL 109          
BLAST of mRNA_H-elongata_contig156275.3669.1 vs. uniprot
Match: H2YN08_CIOSA (Ras-related protein Rab n=1 Tax=Ciona savignyi TaxID=51511 RepID=H2YN08_CIOSA)

HSP 1 Score: 58.9 bits (141), Expect = 6.540e-9
Identity = 26/47 (55.32%), Postives = 33/47 (70.21%), Query Frame = 0
Query:    1 REALNWFCDRHGFAGWFETSAKLNINIDEASHFLVRKVLEKLPTSGH 47
            ++ ++ +C   GFA WFETSAK NINIDEA+ FLV K+LE   T  H
Sbjct:  140 KQQMDTYCKEKGFAAWFETSAKANINIDEAAKFLVGKILENERTYSH 186          
BLAST of mRNA_H-elongata_contig156275.3669.1 vs. uniprot
Match: A0A443RHK7_9ACAR (Ras-related protein Rab n=1 Tax=Dinothrombium tinctorium TaxID=1965070 RepID=A0A443RHK7_9ACAR)

HSP 1 Score: 59.7 bits (143), Expect = 6.640e-9
Identity = 25/38 (65.79%), Postives = 32/38 (84.21%), Query Frame = 0
Query:    4 LNWFCDRHGFAGWFETSAKLNINIDEASHFLVRKVLEK 41
            +N FC++H F+GWF TSAK NINIDE ++FL+ KVLEK
Sbjct:  231 MNQFCEKHQFSGWFYTSAKNNINIDECANFLISKVLEK 268          
BLAST of mRNA_H-elongata_contig156275.3669.1 vs. uniprot
Match: A0A8C5SDI4_LATLA (RAB32, member RAS oncogene family n=1 Tax=Laticauda laticaudata TaxID=8630 RepID=A0A8C5SDI4_LATLA)

HSP 1 Score: 57.4 bits (137), Expect = 8.280e-9
Identity = 26/39 (66.67%), Postives = 29/39 (74.36%), Query Frame = 0
Query:    4 LNWFCDRHGFAGWFETSAKLNINIDEASHFLVRKVLEKL 42
            +N FC   GFAGWFETSAK NINIDEA+ FLV  +L  L
Sbjct:   70 MNQFCKEGGFAGWFETSAKDNINIDEAARFLVENILTNL 108          
BLAST of mRNA_H-elongata_contig156275.3669.1 vs. uniprot
Match: A0A443SF80_9ACAR (Ras-related protein Rab n=1 Tax=Leptotrombidium deliense TaxID=299467 RepID=A0A443SF80_9ACAR)

HSP 1 Score: 58.9 bits (141), Expect = 9.520e-9
Identity = 24/39 (61.54%), Postives = 34/39 (87.18%), Query Frame = 0
Query:    3 ALNWFCDRHGFAGWFETSAKLNINIDEASHFLVRKVLEK 41
            +L+ FC++H FAGWF TSAK N+N+DE+++FL+ KVLEK
Sbjct:  174 SLDQFCEKHKFAGWFYTSAKDNVNVDESANFLIGKVLEK 212          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig156275.3669.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G389_ECTSI5.130e-2480.70Ras-related protein Rab n=1 Tax=Ectocarpus silicul... [more]
UPI0004BD37B74.340e-951.85ras-related protein Rab-32 n=1 Tax=Equus przewalsk... [more]
A0A6V1S8I5_HETAK4.570e-954.17Ras-related protein Rab n=1 Tax=Heterosigma akashi... [more]
F6UVE7_HORSE5.070e-951.85Ras-related protein Rab n=2 Tax=Equus TaxID=9789 R... [more]
UPI00033152C05.270e-967.57ras-related protein Rab-32 n=1 Tax=Sorex araneus T... [more]
A0A4U1FQJ1_MONMO6.220e-969.44Uncharacterized protein (Fragment) n=3 Tax=Cetacea... [more]
H2YN08_CIOSA6.540e-955.32Ras-related protein Rab n=1 Tax=Ciona savignyi Tax... [more]
A0A443RHK7_9ACAR6.640e-965.79Ras-related protein Rab n=1 Tax=Dinothrombium tinc... [more]
A0A8C5SDI4_LATLA8.280e-966.67RAB32, member RAS oncogene family n=1 Tax=Laticaud... [more]
A0A443SF80_9ACAR9.520e-961.54Ras-related protein Rab n=1 Tax=Leptotrombidium de... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 4..48

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig156275contigH-elongata_contig156275:1227..1424 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig156275.3669.1mRNA_H-elongata_contig156275.3669.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig156275 1227..1424 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig156275.3669.1 ID=prot_H-elongata_contig156275.3669.1|Name=mRNA_H-elongata_contig156275.3669.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=66bp
REALNWFCDRHGFAGWFETSAKLNINIDEASHFLVRKVLEKLPTSGHPSS
RRLGMKVCVCICVDL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR027417P-loop_NTPase