prot_H-elongata_contig15600.3658.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig15600.3658.1
Unique Nameprot_H-elongata_contig15600.3658.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length579
Homology
BLAST of mRNA_H-elongata_contig15600.3658.1 vs. uniprot
Match: D7FI24_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FI24_ECTSI)

HSP 1 Score: 422 bits (1086), Expect = 4.400e-131
Identity = 293/626 (46.81%), Postives = 362/626 (57.83%), Query Frame = 0
Query:    1 RAQDQNCQTVTGISLPAQDLRPGTWCWESLEKLGKAASIASAVAMTTVSEAENLTHQASRKMGI-------------------SSSRAAEDGLRRCGTPQPRLFKPTPIARRC-DGASRPRPRGELLFEELHRNPPTPYRRRAQRILDAETKASLTFTPEINARSTLLAEVHEACRPLLFDVPGGVSSTSSCGRGVTRGFRGNGGTKRV-TEC--TRR------ASSKALAKSLQLHSEHAEIEHRKQQRRKDFMSQSCPFTPDIGTSAAWPSRDANPDEFIRRLHNEHEEKNRRREAKRLVLYGDDESSEPVDSMTGRPLFTPTINDKRLRPRRSR-------------SERGVRPPEFDGNGGGSWGSGVRGVRLETDVEEKGQRWRSRRHK-----VFYRLWEQSLALGRRKEANAREWEEARKARASEGHVTDSRSADLVRAMRMRGLLQIYRMLLASVEYARLPERLPEGLNYDEAIELTIDKIDAIFDNEDDAWQEMTLEVAKADPSVLKSELVDIVASALAGHGQETLNLWEFCELLDASIRNLATTRGPMAHLFFTSGDGGSSFARTGEGTAVAPAAXXXXXXAQREEEAELKEMTFHPKVGKKSTAIARTMGRDGSK 579
            RAQD  CQT TG+++ AQDLRP TWC ES E LG+ A+                                              S R  EDG+RRCG  +P +F+PTP+AR   DGA R RP+GELLF+ L+RNPPTP RRRA+++L A+T+A+ TF PEIN  S  LAE  EA R LL  V  G   + S GRG   G  G GG+KR  TE   TR       A SK + KS +LH+EHA+ E R+++RRK+ +SQSCPFTPDIG SAAWP ++   ++F+R              AKR  L+G   +S  +D  TGRP F+P IN K    R+               S  GV                 RG +   D  + G   R   H      +   LWE+ LAL RR+EA+AR  EEARK+ A+ GHV   RSA+L+RAMR+R L+Q YR LLASVEYARLPE    GL+YDEA+E    KI+AIFDN++DAWQEMTLEVAKADPSVLK ELV +V SALAGHG+ETL+L  FCELLDA++ NLA+  GP AHLF       ++ A        A AA        RE+ AELKEMTF P++   S AIARTMGRDG+K
Sbjct:  536 RAQDDTCQTFTGLAVAAQDLRPDTWCRESPEALGRVAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDSSGSRRVGEDGVRRCGRRRPEMFRPTPVARPSGDGAVRARPKGELLFDNLYRNPPTPSRRRAKQVLQADTRATCTFAPEINECSRRLAEAQEARRDLLEFVRAG---SESDGRGG--GAEGKGGSKREDTEAAATRAGXXAGAARSKVIVKSHRLHAEHADNEQRRERRRKELLSQSCPFTPDIGVSAAWPIQETTTEDFVRXXXXXXXXXXXXXXAKRYTLHGAPHAS--IDPATGRPFFSPMIN-KTWAGRQHXXXXXXXXXXXXWFSRHGVTXXXXXXXXXXXXAG--RGAKRPGDKGKAGTDGRCFYHDDDDRPIHASLWERGLALERRREADARSREEARKSAAAAGHV-GGRSAELIRAMRVRSLVQTYRTLLASVEYARLPE----GLDYDEAMESITSKINAIFDNDNDAWQEMTLEVAKADPSVLKPELVPVVTSALAGHGEETLSLLGFCELLDAAVENLASAGGPTAHLFAPGAGRSAAGAXXXXXXXXAKAA--------REDSAELKEMTFRPRLNSHSKAIARTMGRDGTK 1138          
BLAST of mRNA_H-elongata_contig15600.3658.1 vs. uniprot
Match: A0A6H5JFG4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JFG4_9PHAE)

HSP 1 Score: 230 bits (587), Expect = 3.440e-66
Identity = 141/226 (62.39%), Postives = 169/226 (74.78%), Query Frame = 0
Query:  357 LWEQSLALGRRKEANAREWEEARKARASEGHVTDSRSADLVRAMRMRGLLQIYRMLLASVEYARLPERLPEGLNYDEAIELTIDKIDAIFDNEDDAWQEMTLEVAKADPSVLKSELVDIVASALAGHGQETLNLWEFCELLDASIRNLATTRGPMAHLFF---TSGDGGSSFARTGEGTAVAPAAXXXXXXAQREEEAELKEMTFHPKVGKKSTAIARTMGRDGSK 579
            LWE+ LAL R++EA+AR  EEARK+ A+ GHV   RSA+L+RAMR+R L+Q YR LLASVEY+RLPE    GL+YDEA+E    KI+AIFDN++DAWQEMTLEVAK DPSVLK ELV +V SALAGHG +TL+L  FCELLDA++ NLA+  GP AHLF       + G    R+  GT  A A  XXXX A RE+ AELKEMTF P++  KS AIARTMGRDG+K
Sbjct:   75 LWERGLALERKREADARSREEARKSAAAAGHV-GGRSAELIRAMRVRSLVQTYRTLLASVEYSRLPE----GLDYDEAMESITAKINAIFDNDNDAWQEMTLEVAKVDPSVLKPELVPVVTSALAGHGDDTLSLLGFCELLDAAVENLASAGGPTAHLFAPGENEKECGMKRGRSAAGTGRAAA--XXXXKAAREDSAELKEMTFRPRLNSKSKAIARTMGRDGTK 293          
BLAST of mRNA_H-elongata_contig15600.3658.1 vs. uniprot
Match: A0A6H5JGR6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JGR6_9PHAE)

HSP 1 Score: 167 bits (424), Expect = 2.580e-40
Identity = 119/299 (39.80%), Postives = 153/299 (51.17%), Query Frame = 0
Query:    1 RAQDQNCQTVTGISLPAQDLRPGTWCWESLEKLGKAASIASAVAM-----------TTV----SEAENLTHQASRKMGI----SSSRAAEDGLRRCGTPQPRLFKPTPIARRCD-GASRPRPRGELLFEELHRNPPTPYRRRAQRILDAETKASLTFTPEINARSTLLAEVHEACRPLLFDVPGGVSSTSSCGRGVTRGFRGNGGTKRVTECTRR------ASSKALAKSLQLHSEHAEIEHRKQQRRKDFMSQSCPFTPDIGTSAAWPSRDANPDEFIRRLHNEHEEKNRRREAKRLV 273
            RAQD  CQT TG+++ AQDLRP TWC ES E LG+ A+ AS               T V    +  +    ++ R+ G      S R  EDG+RRCG  +P +F+PTP+AR  D G  R RP+GE                           A+ TF PEIN  S  LAE  EA R LL  V  G  S  S G             K              A SK + KS +LH++HA+IE R+++RRK+ +SQSCPFTPDIG SAAWP ++   ++F+RRLH EH E+ RR +AKR  
Sbjct:  701 RAQDDTCQTFTGLAVAAQDLRPDTWCRESPEALGRVAATASXXXXXXXXXXXXXRSTAVKPGGATGDQRGPESRRRYGXXXSSDSRRVGEDGVRRCGRRRPEMFRPTPVARPLDHGVVRARPKGE---------------------------ATCTFAPEINELSRRLAEAREARRDLLDFVRAGSESDGS-GXXXXXXXXXXXXRKDTPAAXXXXXXXGAARSKIMVKSYRLHADHADIEQRRERRRKELLSQSCPFTPDIGVSAAWPIQETTKEDFVRRLHAEHAEQERRLQAKRYT 971          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig15600.3658.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7FI24_ECTSI4.400e-13146.81Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JFG4_9PHAE3.440e-6662.39Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JGR6_9PHAE2.580e-4039.80Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR35381FAMILY NOT NAMEDcoord: 212..298

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig15600contigH-elongata_contig15600:262..7624 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig15600.3658.1mRNA_H-elongata_contig15600.3658.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig15600 262..7624 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig15600.3658.1 ID=prot_H-elongata_contig15600.3658.1|Name=mRNA_H-elongata_contig15600.3658.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=579bp
RAQDQNCQTVTGISLPAQDLRPGTWCWESLEKLGKAASIASAVAMTTVSE
AENLTHQASRKMGISSSRAAEDGLRRCGTPQPRLFKPTPIARRCDGASRP
RPRGELLFEELHRNPPTPYRRRAQRILDAETKASLTFTPEINARSTLLAE
VHEACRPLLFDVPGGVSSTSSCGRGVTRGFRGNGGTKRVTECTRRASSKA
LAKSLQLHSEHAEIEHRKQQRRKDFMSQSCPFTPDIGTSAAWPSRDANPD
EFIRRLHNEHEEKNRRREAKRLVLYGDDESSEPVDSMTGRPLFTPTINDK
RLRPRRSRSERGVRPPEFDGNGGGSWGSGVRGVRLETDVEEKGQRWRSRR
HKVFYRLWEQSLALGRRKEANAREWEEARKARASEGHVTDSRSADLVRAM
RMRGLLQIYRMLLASVEYARLPERLPEGLNYDEAIELTIDKIDAIFDNED
DAWQEMTLEVAKADPSVLKSELVDIVASALAGHGQETLNLWEFCELLDAS
IRNLATTRGPMAHLFFTSGDGGSSFARTGEGTAVAPAAAAAAERAQREEE
AELKEMTFHPKVGKKSTAIARTMGRDGSK
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