prot_H-elongata_contig155856.3652.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig155856.3652.1
Unique Nameprot_H-elongata_contig155856.3652.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length85
Homology
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BLAST of mRNA_H-elongata_contig155856.3652.1 vs. uniprot
Match: A0A6H5JTX7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTX7_9PHAE)

HSP 1 Score: 131 bits (330), Expect = 4.970e-34
Identity = 61/75 (81.33%), Postives = 65/75 (86.67%), Query Frame = 0 
Query:    1 SRCWNISSEGGDVAAVTAMLWRWYRDWSIPPETPLFLFGASSGGTMATSMGSKGGFQLCEKRSTYVQVSGVVSQV 75
            S CW  +SE GDV+ V AMLWRWYRDWSIPP TPLFLFGASSGG MAT M SKGGFQLCEKR+TYVQVSGV+SQV
Sbjct:  210 SGCWKYNSEDGDVSLVRAMLWRWYRDWSIPPNTPLFLFGASSGGNMATMMASKGGFQLCEKRTTYVQVSGVMSQV 284
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BLAST of mRNA_H-elongata_contig155856.3652.1 vs. uniprot
Match: D7G5R7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5R7_ECTSI)

HSP 1 Score: 131 bits (329), Expect = 5.600e-34
Identity = 62/82 (75.61%), Postives = 68/82 (82.93%), Query Frame = 0 
Query:    3 CWNISSEGGDVAAVTAMLWRWYRDWSIPPETPLFLFGASSGGTMATSMGSKGGFQLCEKRSTYVQVSGVVSQVQCTNYTIPP 84
            CW  +SE GDV  V AMLWRWYRDWSIPP TPLFLFGASSGG MAT M SKGGFQLCEKR+TYVQVSGV+SQV   ++ +PP
Sbjct:  151 CWQHNSEDGDVNLVRAMLWRWYRDWSIPPNTPLFLFGASSGGNMATMMASKGGFQLCEKRTTYVQVSGVISQV---SWGVPP 229
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig155856.3652.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JTX7_9PHAE4.970e-3481.33Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G5R7_ECTSI5.600e-3475.61Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig155856contigH-elongata_contig155856:170..1204 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig155856.3652.1mRNA_H-elongata_contig155856.3652.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig155856 170..1204 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig155856.3652.1 ID=prot_H-elongata_contig155856.3652.1|Name=mRNA_H-elongata_contig155856.3652.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=85bp
SRCWNISSEGGDVAAVTAMLWRWYRDWSIPPETPLFLFGASSGGTMATSM
GSKGGFQLCEKRSTYVQVSGVVSQVQCTNYTIPP*
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