prot_H-elongata_contig15565.3645.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig15565.3645.1
Unique Nameprot_H-elongata_contig15565.3645.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length535
Homology
BLAST of mRNA_H-elongata_contig15565.3645.1 vs. uniprot
Match: A0A6H5KD93_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KD93_9PHAE)

HSP 1 Score: 468 bits (1205), Expect = 6.150e-157
Identity = 315/562 (56.05%), Postives = 378/562 (67.26%), Query Frame = 0
Query:    1 MLKAVVDEHG-----SSAFRLKDAYMNDPKRTEQLLDTFPMSSVLKKVKPVGSGQRCQLHRR----SQAAIGQGNVACGFRGAESGGR-----------GIGGIAGPPEPWDWEDAWERMPPNLRCEVATIKAPALEAAIHHATDANRFCSDCKHNVVQAHDILMGKVELEGCENEEEFDDEMFQPFEDRVFDGESGSSEDKILVCDVMDVEDLIYFYEDFSCQDLDNSSSGQQRHAATLEQGQREVRSVLGAVLLNQLRSVWHAQTAQVQGEQYLFCLVVEGIRTMLASHGAAPDGDELMVAIDAKERCAAEERRQKXXXXXXXXXXAGKAQLTTTGASGTSKGGXXIGLIPGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTVSAIVGARDAHGDVL-----SRRSENGGEADPVSSH-RKRHVCSVDSPCVAEGCCDAV---DVKVEKDAVTTCPEETRGRIRTDLSVGPICGDAQASVAAMVSPVGSNSLFGTGGLAFQLGCGDNEDSGDDFEIDPDLIMEMEQLKSSVRSRSDIDCLRKTLQQNYDRFISQGAGRV 533
            MLKAVVDEHG     S AFRLK+AY+ DPKR  QLLDTFPMSSVLKK++P+GS QRCQLHRR    S A +G G    G R  +               G+G +    + WDWEDAWERMPPNLR EVAT+KAPA EAA+H AT++N+FC DCK+NVVQAHDILMGK+ LEG +NEEE+D+E+F P EDRVF+GESG+SEDK+L+CDVMDVEDLIYF+E+FS    +  SSG QRHA+TL+QGQREVRS+LG ++L+QLRSVWH QTAQVQ EQYLFCLVV+ +RTMLA+HGAAP GD+LM AID +E+CAAE RRQK XXXXXXXXX                           XXXXXXXXXXXXXXXXXXXXXX         S ++G R  +G+       +  +   G  +PV  H +K+H  +      A   C+     +V V   A ++  +E     R  L+ G   G A  + A       S+ +FG GGLAFQL   DNE   +D  +D DLI EMEQLKSSVRS+SDID LRKTL+QNYDRFISQGAGRV
Sbjct:   41 MLKAVVDEHGNGGGMSGAFRLKEAYVKDPKRMGQLLDTFPMSSVLKKIQPMGSAQRCQLHRRLISLSLAGVGSGG---GHRAGDXXXXXXXXXXXXXXXGVGSV----DSWDWEDAWERMPPNLRNEVATVKAPAFEAAVHQATESNKFCPDCKYNVVQAHDILMGKIGLEGSDNEEEYDEEIFLPIEDRVFEGESGTSEDKMLICDVMDVEDLIYFHEEFSASSQELDSSGSQRHASTLDQGQREVRSILGGLVLSQLRSVWHTQTAQVQAEQYLFCLVVDAVRTMLAAHGAAPHGDDLM-AIDHEEKCAAEGRRQKRXXXXXXXXXXXXXXXXXXXXX--------------XXXXXXXXXXXXXXXXXXXXXXXSTGRHSGDRSGVLGRRTINGNAAVGAPGAAATGKVGVREPVHGHNKKQHRKTNPEETAAHAACECGSGGEVGVGVGAASSGGKEDA---RACLAAGVTSGFATKATA-------SHGVFGAGGLAFQLNNEDNESDEEDG-VDHDLITEMEQLKSSVRSKSDIDFLRKTLRQNYDRFISQGAGRV 569          
BLAST of mRNA_H-elongata_contig15565.3645.1 vs. uniprot
Match: D7FQ14_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQ14_ECTSI)

HSP 1 Score: 231 bits (588), Expect = 1.220e-67
Identity = 199/370 (53.78%), Postives = 235/370 (63.51%), Query Frame = 0
Query:  183 ILVCDVMDVEDLIYFYEDFSCQDLDNSSSGQQRHAATLEQGQREVRSVLGAVLLNQLRSVWHAQTAQVQGEQYLFCLVVEGIRTMLASHGAAPDGDELMVAIDAKERCAAEERRQKXXXXXXXXXXAGKAQLTTTGASGTSKGGXXIGLIPGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTVSAIVGARDAHGDVLSRRSENG---------------GEADPVSSHR-KRHVCSVDSPCVAEGCCDAV---DVKVEKDAVTTCPEETRGRIRTDLSVGPICGDAQASVAAMVSPVGSNSLFGTGGLAFQLGCGDNEDSGDDFEIDPDLIMEMEQLKSSVRSRSDIDCLRKTLQQNYDRFISQGAGRV 533
            +L+CDVMDVEDLIYF+E+FS    +  SSG QRHA+TL+QGQREVRS+LG ++L+QLRSVWH QTAQVQ EQYLFCLVV+ +RTMLA+HGAAP GD+LM AID +E+CAAE RRQK XXXXXXXXX                           XXXXXXXXXXXXXXXXXXXXXXXXXXXXX  +   G R     VL RR+ NG               G  +PV  H  K+H  +  +   A   C+     +V V   A ++  +E     R  L+ G   G A  +         S+ +FG GGLAFQL   DNE   +D  +D DLI EMEQLKSSVRS+SDID LRKTL+QNYDRFISQGAGRV
Sbjct:    1 MLICDVMDVEDLIYFHEEFSASSQELDSSGSQRHASTLDQGQREVRSILGGLVLSQLRSVWHTQTAQVQAEQYLFCLVVDAVRTMLAAHGAAPHGDDLM-AIDHEEKCAAEGRRQKRXXXXXXXXXXXXXXXXXX-----------------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTARHSGGRSG---VLGRRTINGSAAVGTPGAAATGKVGAREPVHGHNTKQHRKTNPAESAAHAACECGSGGEVGVGLGAASSGGKEDA---RACLTAGVTSGFATKATT-------SHGVFGAGGLAFQLNNEDNESDEEDG-VDHDLITEMEQLKSSVRSKSDIDFLRKTLRQNYDRFISQGAGRV 338          
BLAST of mRNA_H-elongata_contig15565.3645.1 vs. uniprot
Match: A0A835YPU0_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YPU0_9STRA)

HSP 1 Score: 220 bits (561), Expect = 2.170e-61
Identity = 132/301 (43.85%), Postives = 183/301 (60.80%), Query Frame = 0
Query:    1 MLKAVVDEHGSSAFRLKDAYMNDPKRTEQLLDTFPMSSVLKKVKPVGSGQRCQLHRRSQAAI------------GQGNVACGFRGAESGGRGIGGIAGPPEPWDWEDAWERMPPNLRCEVATIKAPALEAAIHHATDANRFCSDCKHNVVQAHDILMGKVELEGCENEEEFDDEMFQPFEDRVF--------DGESGSSEDKILVCDVMDVEDLIYFYEDFSCQDLDNSSSGQQRHAATLEQGQREVRSVLGAVLLNQLRSVWHAQTAQVQGEQYLFCLVVEGIRTMLASHGAAPDGDELM 281
            ML A++D+ GS+   LK+AY ND +R   LL+ FP+++VLKKV+P  S  RC LHRRS  +                        A +    +  + G    W+W DAW+R+P   RC+VATI A  LE+A+H AT  +RFC+DCKHNVV A D+L  + +  G +N EE++ E+F+PF  R+          G +G +  ++LVC V DVE+LI ++EDF  Q  + +SSGQ RHAATLE GQRE+RS++G++LL+QLR+ W A  A+ Q EQYLF L V+ IRT L S      GD L+
Sbjct:   56 MLAAIMDDDGSNLV-LKEAYQNDERRLSLLLEAFPLNAVLKKVQPPSSSLRCPLHRRSACSTPLTASNXXXXXXXXXXXXXXXXSANNSSSTVAALDG----WEWMDAWDRLPQQDRCKVATIDAAGLESALHVATSNHRFCADCKHNVVIAFDLLTQRYDASGIDNAEEYNAELFRPFIGRMRPMEGGAEGSGGAGRAGRQMLVCAVEDVEELICWHEDFDSQQ-EYASSGQ-RHAATLEHGQRELRSIVGSMLLSQLRAAWTAHNARAQAEQYLFGLAVDAIRTALRSAEDDLMGDGLL 349          
BLAST of mRNA_H-elongata_contig15565.3645.1 vs. uniprot
Match: A0A7S2S925_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2S925_9STRA)

HSP 1 Score: 159 bits (401), Expect = 1.160e-39
Identity = 99/276 (35.87%), Postives = 149/276 (53.99%), Query Frame = 0
Query:    1 MLKAVVDEHGSSAFRLKDAYMNDPKRTEQLLDTFPMSSVLKKVKPVGSGQRCQLHRRSQAAIGQGNVACGFRGAESGGRGIGGIAGPPEPWDWEDAWERMPPNLRCEVATIKAPALEAAIHHATDANRFCSDCKHNVVQAHDILMGKVELEGCENE-EEFDDEMFQPFEDRVFD---GESGSSEDKILVCDVMDVEDLIYFYEDFSCQDLDNSSSGQQRHAATLEQGQREVRSVLGAVLLNQLRSVWHAQTAQVQGEQYLFCLVVEGIRTMLASHG 272
            ++ +VV++    A  L+  Y +DPK+  QL+ +FP S+V ++V+P    +RC LHRR+                     G+   A P   WDW DAWER+P  +R EVA +    LE+A+  AT +  FC DCK NV+   D+L+G+ +L       E+++  +F     RV      + G SE   L C   +V +LI  +E F  Q+L  +S   QRHAATL+Q Q E+R+ +GA LL QLR+   A    VQGEQ+L  L+++ I+  + + G
Sbjct:   76 LVGSVVEDCTCDALVLRQCYADDPKKLGQLMQSFPHSNVFEQVQPEKGAKRCALHRRA---------------------GVVASALPDNSWDWRDAWERLPSPIRREVALVDVGVLESAVQRATSSKHFCPDCKPNVIAMFDVLVGRYDLLDLPGAIEDYNPVLFDSLMGRVITEQLNDGGRSE--FLHCREDEVANLIADFEAFEIQEL--TSPVNQRHAATLDQAQEEIRATIGAQLLVQLRTASQAHATAVQGEQFLLGLILDFIQRAVDTDG 326          
BLAST of mRNA_H-elongata_contig15565.3645.1 vs. uniprot
Match: D7FSF5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FSF5_ECTSI)

HSP 1 Score: 144 bits (362), Expect = 1.040e-34
Identity = 92/254 (36.22%), Postives = 126/254 (49.61%), Query Frame = 0
Query:   13 AFRLKDAYMNDPKRTEQLLDTFPMSSVLKKVKPVGSGQRCQLHRRSQAAIGQGNVACGFRGAESGGRGIGGIAGPPEPWDWEDAWERMPPNLRCEVATIKAPALEAAIHHATDANRFCSDCKHNVVQAHDILMGKVELEGCENEEEFDDEMFQPFEDRVFDGESGSSEDKILVCDVMDVEDLIYFYEDFSCQDLDNSSSGQQRHAATLEQGQREVRSVLGAVLLNQLRSVWHAQTAQVQGEQYLFCLVVEGIRT 266
            A  L++AY+ D  R +QLL+TFP+  ++KKV+P G G RC++HRR+                  GG+ I       E W+WEDAW+R+P ++R +VA I   ALEAA+H                                                                    DVE+LI ++EDF  ++   SS   QRHAATLE GQRE+RS++G+VLL+QLR+ +H   AQVQGEQYLF LV++ IRT
Sbjct:   74 ALCLREAYLTDRARLDQLLETFPLEPLMKKVQPKGVGLRCEIHRRN------------------GGQAIS------EGWEWEDAWDRLPADMRLKVAAIDVDALEAAMHQ-------------------------------------------------------------------DVEELICWHEDFDSREYTRSS---QRHAATLEHGQREIRSIVGSVLLSQLRTTYHNHLAQVQGEQYLFALVLQAIRT 233          
BLAST of mRNA_H-elongata_contig15565.3645.1 vs. uniprot
Match: D7FQ15_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQ15_ECTSI)

HSP 1 Score: 119 bits (299), Expect = 1.640e-27
Identity = 69/130 (53.08%), Postives = 77/130 (59.23%), Query Frame = 0
Query:    1 MLKAVVDEHG------SSAFRLKDAYMNDPKRTEQLLDTFPMSSVLKKVKPVGSGQRCQLHRRSQAAIGQGNVACGFRGAESGGRGIGGIAGPP----------------EPWDWEDAWERMPPNLRCEV 108
            MLKAVVDEHG      S AFRLK+AY+ DPKR  QLLDTFPMSSVLKKV+P+GS QRCQLHRR         ++    G  SGG   GG                     + WDWEDAWERMPPNLR + 
Sbjct:   86 MLKAVVDEHGGNGGGMSGAFRLKEAYVKDPKRMGQLLDTFPMSSVLKKVQPMGSAQRCQLHRRL--------ISLSLAGVGSGGGHRGGXXXXXXXXXXXXXXXXXXXSVDSWDWEDAWERMPPNLRVKT 207          
BLAST of mRNA_H-elongata_contig15565.3645.1 vs. uniprot
Match: A0A7S2ATP2_9STRA (Hypothetical protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2ATP2_9STRA)

HSP 1 Score: 103 bits (258), Expect = 1.360e-22
Identity = 57/126 (45.24%), Postives = 78/126 (61.90%), Query Frame = 0
Query:    1 MLKAVVDE-HGSSAFRLKDAYMNDPKRTEQLLDTFPMSSVLKKVKPVGSGQRCQLHRRS-QAAIGQGNVACGFRGAESGGRGIGGIAGPPEPWDWEDAWERMPPNLRCEVATIKAPALEAAIHHAT 124
            +L AV+ E +      L+++Y NDP R +QLL TFP+SSV+KKV+P G   RC +HRR+  A +  G+V      +E+GG            WDWE+AW+R+P NLR +VATI   AL  A+HHAT
Sbjct:   32 LLNAVMKEGNDCGELYLRESYQNDPLRLDQLLTTFPLSSVIKKVQPTGMNLRCAVHRRALSATLTMGHVHS-HTASEAGGG-----------WDWEEAWDRLPANLRKKVATIDVSALSTAVHHAT 145          
BLAST of mRNA_H-elongata_contig15565.3645.1 vs. uniprot
Match: W7TQZ3_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TQZ3_9STRA)

HSP 1 Score: 97.8 bits (242), Expect = 7.650e-18
Identity = 52/91 (57.14%), Postives = 68/91 (74.73%), Query Frame = 0
Query:  180 EDKILVCDVMDVEDLIYFYEDFSCQDLDNSSSGQQRHAATLEQGQREVRSVLGAVLLNQLRSVWHAQTAQVQGEQYLFCLVVEGIRTMLAS 270
            +D++L C V DVE LI + +DF  Q+   ++SGQ RHAATLE GQREVR+++G+VLL+QLR+ WH QTA  Q E YLF L ++ IRT LAS
Sbjct:  172 DDRVLWCAVEDVERLIAWAQDFDSQEF--AASGQ-RHAATLEHGQREVRAIIGSVLLSQLRAAWHQQTAHAQSEHYLFALAMQAIRTQLAS 259          
BLAST of mRNA_H-elongata_contig15565.3645.1 vs. uniprot
Match: A0A4D9CZ38_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CZ38_9STRA)

HSP 1 Score: 97.4 bits (241), Expect = 1.260e-17
Identity = 52/91 (57.14%), Postives = 68/91 (74.73%), Query Frame = 0
Query:  180 EDKILVCDVMDVEDLIYFYEDFSCQDLDNSSSGQQRHAATLEQGQREVRSVLGAVLLNQLRSVWHAQTAQVQGEQYLFCLVVEGIRTMLAS 270
            +D++L C V DVE LI + +DF  Q+   ++SGQ RHAATLE GQREVR+++G+VLL+QLR+ WH QTA  Q E YLF L ++ IRT LAS
Sbjct:  269 DDRVLWCAVEDVERLIAWAQDFDSQEY--ATSGQ-RHAATLEHGQREVRAIIGSVLLSQLRAAWHQQTAHAQSEHYLFALAMQAIRTQLAS 356          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig15565.3645.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 9
Match NameE-valueIdentityDescription
A0A6H5KD93_9PHAE6.150e-15756.05Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FQ14_ECTSI1.220e-6753.78Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A835YPU0_9STRA2.170e-6143.85Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S2S925_9STRA1.160e-3935.87Hypothetical protein (Fragment) n=1 Tax=Rhizochrom... [more]
D7FSF5_ECTSI1.040e-3436.22Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7FQ15_ECTSI1.640e-2753.08Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A7S2ATP2_9STRA1.360e-2245.24Hypothetical protein (Fragment) n=1 Tax=Dictyocha ... [more]
W7TQZ3_9STRA7.650e-1857.14Uncharacterized protein n=1 Tax=Nannochloropsis ga... [more]
A0A4D9CZ38_9STRA1.260e-1757.14Uncharacterized protein n=1 Tax=Nannochloropsis sa... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR026073Gametogenetin-binding protein 2PANTHERPTHR13601FAMILY NOT NAMEDcoord: 12..529

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig15565contigH-elongata_contig15565:1042..6904 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig15565.3645.1mRNA_H-elongata_contig15565.3645.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig15565 511..7676 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig15565.3645.1 ID=prot_H-elongata_contig15565.3645.1|Name=mRNA_H-elongata_contig15565.3645.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=535bp
MLKAVVDEHGSSAFRLKDAYMNDPKRTEQLLDTFPMSSVLKKVKPVGSGQ
RCQLHRRSQAAIGQGNVACGFRGAESGGRGIGGIAGPPEPWDWEDAWERM
PPNLRCEVATIKAPALEAAIHHATDANRFCSDCKHNVVQAHDILMGKVEL
EGCENEEEFDDEMFQPFEDRVFDGESGSSEDKILVCDVMDVEDLIYFYED
FSCQDLDNSSSGQQRHAATLEQGQREVRSVLGAVLLNQLRSVWHAQTAQV
QGEQYLFCLVVEGIRTMLASHGAAPDGDELMVAIDAKERCAAEERRQKRR
QKRKERKRAGKAQLTTTGASGTSKGGGGIGLIPGAGGGRGRKSSNTSVAA
SATLTAAAQTKPKPTVSAIVGARDAHGDVLSRRSENGGEADPVSSHRKRH
VCSVDSPCVAEGCCDAVDVKVEKDAVTTCPEETRGRIRTDLSVGPICGDA
QASVAAMVSPVGSNSLFGTGGLAFQLGCGDNEDSGDDFEIDPDLIMEMEQ
LKSSVRSRSDIDCLRKTLQQNYDRFISQGAGRVH*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR026073GGNBP2