prot_H-elongata_contig155327.3622.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig155327.3622.1
Unique Nameprot_H-elongata_contig155327.3622.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length47
Homology
BLAST of mRNA_H-elongata_contig155327.3622.1 vs. uniprot
Match: A0A6H5JKZ1_9PHAE (Thioredoxin domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JKZ1_9PHAE)

HSP 1 Score: 90.5 bits (223), Expect = 4.130e-21
Identity = 41/46 (89.13%), Postives = 44/46 (95.65%), Query Frame = 0
Query:    1 RFRDLKNEYDALDCVVLGVSADHEVSHGKFIAKFGLNFRLLADTDR 46
            +FRDLK+EYD LDC VLGVSADHEVSHGKFIAK+GLNFRLLADTDR
Sbjct:  140 KFRDLKDEYDRLDCAVLGVSADHEVSHGKFIAKYGLNFRLLADTDR 185          
BLAST of mRNA_H-elongata_contig155327.3622.1 vs. uniprot
Match: A0A6H5J6N3_9PHAE (Thioredoxin domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5J6N3_9PHAE)

HSP 1 Score: 73.2 bits (178), Expect = 8.280e-15
Identity = 34/45 (75.56%), Postives = 38/45 (84.44%), Query Frame = 0
Query:    2 FRDLKNEYDALDCVVLGVSADHEVSHGKFIAKFGLNFRLLADTDR 46
            FRDL+++YDALDCVVLGVSAD E SH  FIA  GLNF LLADTD+
Sbjct:   94 FRDLQSDYDALDCVVLGVSADSEASHQDFIADLGLNFSLLADTDK 138          
BLAST of mRNA_H-elongata_contig155327.3622.1 vs. uniprot
Match: A0A7S2V4W9_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V4W9_9STRA)

HSP 1 Score: 66.6 bits (161), Expect = 1.330e-12
Identity = 31/46 (67.39%), Postives = 36/46 (78.26%), Query Frame = 0
Query:    1 RFRDLKNEYDALDCVVLGVSADHEVSHGKFIAKFGLNFRLLADTDR 46
            RFRDLK E+DA +CV+LGVSAD E SH +FIA+   NF LLADT R
Sbjct:   56 RFRDLKAEFDAKNCVILGVSADDEESHQRFIAEHSFNFHLLADTSR 101          
BLAST of mRNA_H-elongata_contig155327.3622.1 vs. uniprot
Match: A0A0D8ZVQ0_9CYAN (Alkyl hydroperoxide reductase n=4 Tax=Cyanobacteria TaxID=1117 RepID=A0A0D8ZVQ0_9CYAN)

HSP 1 Score: 63.2 bits (152), Expect = 2.580e-11
Identity = 30/45 (66.67%), Postives = 33/45 (73.33%), Query Frame = 0
Query:    2 FRDLKNEYDALDCVVLGVSADHEVSHGKFIAKFGLNFRLLADTDR 46
            FRD  NEY   D VVLGVSAD EVSH +F  K+ LNF LLADTD+
Sbjct:   52 FRDASNEYQGKDVVVLGVSADDEVSHQQFTQKYNLNFPLLADTDK 96          
BLAST of mRNA_H-elongata_contig155327.3622.1 vs. uniprot
Match: K9QLE6_9NOSO (Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen n=12 Tax=Cyanobacteria TaxID=1117 RepID=K9QLE6_9NOSO)

HSP 1 Score: 60.5 bits (145), Expect = 2.820e-10
Identity = 29/45 (64.44%), Postives = 32/45 (71.11%), Query Frame = 0
Query:    2 FRDLKNEYDALDCVVLGVSADHEVSHGKFIAKFGLNFRLLADTDR 46
            FRD + +Y   D VVLGVSAD EVSH  F  KF LNF LLADTD+
Sbjct:   52 FRDAQEQYQGKDVVVLGVSADDEVSHQAFTQKFNLNFPLLADTDK 96          
BLAST of mRNA_H-elongata_contig155327.3622.1 vs. uniprot
Match: A0A2I8ACZ7_9NOSO (Peroxiredoxin n=3 Tax=Cyanobacteria TaxID=1117 RepID=A0A2I8ACZ7_9NOSO)

HSP 1 Score: 60.5 bits (145), Expect = 2.880e-10
Identity = 29/44 (65.91%), Postives = 32/44 (72.73%), Query Frame = 0
Query:    2 FRDLKNEYDALDCVVLGVSADHEVSHGKFIAKFGLNFRLLADTD 45
            FRD K++Y   D VVLGVSAD EVSH  F  K+ LNF LLADTD
Sbjct:   52 FRDAKDDYQGKDIVVLGVSADDEVSHQAFTQKYNLNFPLLADTD 95          
BLAST of mRNA_H-elongata_contig155327.3622.1 vs. uniprot
Match: A0A433MZ60_CHLFR (Peroxiredoxin n=3 Tax=Nostocales TaxID=1161 RepID=A0A433MZ60_CHLFR)

HSP 1 Score: 60.1 bits (144), Expect = 3.980e-10
Identity = 29/45 (64.44%), Postives = 33/45 (73.33%), Query Frame = 0
Query:    2 FRDLKNEYDALDCVVLGVSADHEVSHGKFIAKFGLNFRLLADTDR 46
            FRD  +EY + D VVLGVSAD EVSH  F  K+ LNF LLADTD+
Sbjct:   52 FRDATDEYKSKDIVVLGVSADDEVSHQAFTQKYNLNFPLLADTDK 96          
BLAST of mRNA_H-elongata_contig155327.3622.1 vs. uniprot
Match: A0A7S2V6E0_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V6E0_9STRA)

HSP 1 Score: 59.3 bits (142), Expect = 6.120e-10
Identity = 27/45 (60.00%), Postives = 34/45 (75.56%), Query Frame = 0
Query:    2 FRDLKNEYDALDCVVLGVSADHEVSHGKFIAKFGLNFRLLADTDR 46
            FRDLK+++D  +C +LGVSAD E SH KFI K+ LNF LL+D  R
Sbjct:   31 FRDLKSQFDDRNCKILGVSADSENSHKKFIGKYDLNFDLLSDPSR 75          
BLAST of mRNA_H-elongata_contig155327.3622.1 vs. uniprot
Match: A0A1B7VA47_9NOST (Alkyl hydroperoxide reductase n=7 Tax=Nostocales TaxID=1161 RepID=A0A1B7VA47_9NOST)

HSP 1 Score: 57.8 bits (138), Expect = 3.140e-9
Identity = 29/45 (64.44%), Postives = 32/45 (71.11%), Query Frame = 0
Query:    2 FRDLKNEYDALDCVVLGVSADHEVSHGKFIAKFGLNFRLLADTDR 46
            FRD + EY   D VVLGVSAD EVSH  F  K+ LNF LLADTD+
Sbjct:   52 FRDSQAEYKDKDVVVLGVSADDEVSHQAFTNKYNLNFPLLADTDK 96          
BLAST of mRNA_H-elongata_contig155327.3622.1 vs. uniprot
Match: A0A7C7GSK3_9GAMM (Thioredoxin peroxidase n=1 Tax=Chromatiaceae bacterium TaxID=2049432 RepID=A0A7C7GSK3_9GAMM)

HSP 1 Score: 57.8 bits (138), Expect = 3.820e-9
Identity = 27/45 (60.00%), Postives = 31/45 (68.89%), Query Frame = 0
Query:    2 FRDLKNEYDALDCVVLGVSADHEVSHGKFIAKFGLNFRLLADTDR 46
            FRDL  + D  + VVLG+SAD E SH KFI K+ LNF LL D DR
Sbjct:   52 FRDLSKQLDKTNTVVLGISADDEASHQKFIGKYKLNFTLLCDPDR 96          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig155327.3622.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JKZ1_9PHAE4.130e-2189.13Thioredoxin domain-containing protein n=2 Tax=Ecto... [more]
A0A6H5J6N3_9PHAE8.280e-1575.56Thioredoxin domain-containing protein n=2 Tax=Ecto... [more]
A0A7S2V4W9_9STRA1.330e-1267.39Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A0D8ZVQ0_9CYAN2.580e-1166.67Alkyl hydroperoxide reductase n=4 Tax=Cyanobacteri... [more]
K9QLE6_9NOSO2.820e-1064.44Alkyl hydroperoxide reductase/ Thiol specific anti... [more]
A0A2I8ACZ7_9NOSO2.880e-1065.91Peroxiredoxin n=3 Tax=Cyanobacteria TaxID=1117 Rep... [more]
A0A433MZ60_CHLFR3.980e-1064.44Peroxiredoxin n=3 Tax=Nostocales TaxID=1161 RepID=... [more]
A0A7S2V6E0_9STRA6.120e-1060.00Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A1B7VA47_9NOST3.140e-964.44Alkyl hydroperoxide reductase n=7 Tax=Nostocales T... [more]
A0A7C7GSK3_9GAMM3.820e-960.00Thioredoxin peroxidase n=1 Tax=Chromatiaceae bacte... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000866Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidantPFAMPF00578AhpC-TSAcoord: 2..45
e-value: 4.1E-8
score: 33.2
NoneNo IPR availableGENE3D3.40.30.10coord: 1..46
e-value: 9.9E-10
score: 39.9
IPR036249Thioredoxin-like superfamilySUPERFAMILY52833Thioredoxin-likecoord: 1..46

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig155327contigH-elongata_contig155327:1255..1395 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig155327.3622.1mRNA_H-elongata_contig155327.3622.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig155327 1255..1395 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig155327.3622.1 ID=prot_H-elongata_contig155327.3622.1|Name=mRNA_H-elongata_contig155327.3622.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=47bp
RFRDLKNEYDALDCVVLGVSADHEVSHGKFIAKFGLNFRLLADTDR*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000866AhpC/TSA
IPR036249Thioredoxin-like_sf