prot_H-elongata_contig155307.3621.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig155307.3621.1
Unique Nameprot_H-elongata_contig155307.3621.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length63
Homology
BLAST of mRNA_H-elongata_contig155307.3621.1 vs. uniprot
Match: D7FJH8_ECTSI (Fimbrin n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FJH8_ECTSI)

HSP 1 Score: 86.7 bits (213), Expect = 2.320e-18
Identity = 37/53 (69.81%), Postives = 43/53 (81.13%), Query Frame = 0
Query:    1 KVAFARHLNHNLIGDPFLKHLMPLDSDGADLFHKFHDGVLLCRLVCMAVPGSI 53
            K  FA HLN +L+GDPFL HLMPLD  GADLF  F DGVL+CR+VC+A+PGSI
Sbjct:  135 KAVFACHLNAHLVGDPFLTHLMPLDPGGADLFDSFKDGVLMCRIVCLAIPGSI 187          
BLAST of mRNA_H-elongata_contig155307.3621.1 vs. uniprot
Match: A0A1J3IPI9_NOCCA (Fimbrin-1 n=1 Tax=Noccaea caerulescens TaxID=107243 RepID=A0A1J3IPI9_NOCCA)

HSP 1 Score: 67.4 bits (163), Expect = 1.370e-11
Identity = 28/55 (50.91%), Postives = 39/55 (70.91%), Query Frame = 0
Query:    1 KVAFARHLNHNLIGDPFLKHLMPLDSDGADLFHKFHDGVLLCRLVCMAVPGSIGK 55
            K +F +H+N  L  DPFLKH +PLD D  DL+    DGVL+C+L+ +AVPG+I +
Sbjct:  121 KASFVQHINRYLGDDPFLKHFLPLDPDSNDLYELVKDGVLVCKLINVAVPGTIDE 175          
BLAST of mRNA_H-elongata_contig155307.3621.1 vs. uniprot
Match: UPI000B780FD0 (fimbrin-1-like n=1 Tax=Hevea brasiliensis TaxID=3981 RepID=UPI000B780FD0)

HSP 1 Score: 64.3 bits (155), Expect = 1.520e-10
Identity = 28/55 (50.91%), Postives = 38/55 (69.09%), Query Frame = 0
Query:    1 KVAFARHLNHNLIGDPFLKHLMPLDSDGADLFHKFHDGVLLCRLVCMAVPGSIGK 55
            K ++  H+N  L  DPFLKH +PLD    DLF+   DGVLLC+L+ +AVPG+I +
Sbjct:  125 KASYVVHINSYLGDDPFLKHFLPLDPASNDLFNLVRDGVLLCKLINVAVPGTIDE 179          
BLAST of mRNA_H-elongata_contig155307.3621.1 vs. uniprot
Match: A0A3B6NQT3_WHEAT (Uncharacterized protein n=10 Tax=Triticinae TaxID=1648030 RepID=A0A3B6NQT3_WHEAT)

HSP 1 Score: 64.3 bits (155), Expect = 1.650e-10
Identity = 27/55 (49.09%), Postives = 40/55 (72.73%), Query Frame = 0
Query:    1 KVAFARHLNHNLIGDPFLKHLMPLDSDGADLFHKFHDGVLLCRLVCMAVPGSIGK 55
            K+++  H+N+ L  DPFLK+ +PLD    DLF+   DGVLLC+L+ +AVPG+I +
Sbjct:  129 KISYVNHINNFLGDDPFLKNFLPLDPTSNDLFNLIGDGVLLCKLINIAVPGTIDE 183          
BLAST of mRNA_H-elongata_contig155307.3621.1 vs. uniprot
Match: A0A6I9QS00_ELAGV (fimbrin-4 n=2 Tax=Arecaceae TaxID=4710 RepID=A0A6I9QS00_ELAGV)

HSP 1 Score: 64.3 bits (155), Expect = 1.680e-10
Identity = 28/53 (52.83%), Postives = 38/53 (71.70%), Query Frame = 0
Query:    1 KVAFARHLNHNLIGDPFLKHLMPLDSDGADLFHKFHDGVLLCRLVCMAVPGSI 53
            K ++  H+N  L  DPFLK+ +PLD D  DLF+   DGVLLC+L+ +AVPG+I
Sbjct:  125 KASYVAHINSYLRDDPFLKNYLPLDPDSNDLFNLAKDGVLLCKLINVAVPGTI 177          
BLAST of mRNA_H-elongata_contig155307.3621.1 vs. uniprot
Match: A0A0A9K4V4_ARUDO (Calponin-homology (CH) domain-containing protein n=1 Tax=Arundo donax TaxID=35708 RepID=A0A0A9K4V4_ARUDO)

HSP 1 Score: 63.5 bits (153), Expect = 1.740e-10
Identity = 27/55 (49.09%), Postives = 38/55 (69.09%), Query Frame = 0
Query:    1 KVAFARHLNHNLIGDPFLKHLMPLDSDGADLFHKFHDGVLLCRLVCMAVPGSIGK 55
            K ++  H+N  L GDPFLK  +P+D  G  LF +  DGVLLC+L+ +AVPG+I +
Sbjct:  129 KSSYVAHINTYLRGDPFLKDYLPIDPAGNQLFDRIRDGVLLCKLINVAVPGTIDE 183          
BLAST of mRNA_H-elongata_contig155307.3621.1 vs. uniprot
Match: A0A7J9BBW5_GOSGO (Uncharacterized protein n=2 Tax=Gossypium TaxID=3633 RepID=A0A7J9BBW5_GOSGO)

HSP 1 Score: 63.5 bits (153), Expect = 3.100e-10
Identity = 28/55 (50.91%), Postives = 37/55 (67.27%), Query Frame = 0
Query:    1 KVAFARHLNHNLIGDPFLKHLMPLDSDGADLFHKFHDGVLLCRLVCMAVPGSIGK 55
            K ++  H+N  L  DPFLK  +PLD    DLFH   DGVLLC+L+ +AVPG+I +
Sbjct:  125 KASYVTHINIYLADDPFLKQFLPLDPATNDLFHLAKDGVLLCKLINVAVPGTIDE 179          
BLAST of mRNA_H-elongata_contig155307.3621.1 vs. uniprot
Match: A0A2A6BI66_PRIPA (Plst-1 n=2 Tax=Pristionchus pacificus TaxID=54126 RepID=A0A2A6BI66_PRIPA)

HSP 1 Score: 63.5 bits (153), Expect = 3.120e-10
Identity = 25/55 (45.45%), Postives = 40/55 (72.73%), Query Frame = 0
Query:    1 KVAFARHLNHNLIGDPFLKHLMPLDSDGADLFHKFHDGVLLCRLVCMAVPGSIGK 55
            +VAFA  +N NL  DP L  L+P+  +G DL+HK  DG+++C+L+ +AVPG++ +
Sbjct:  113 EVAFANWINSNLSADPDLAKLLPVILEGGDLYHKIEDGLIICKLINLAVPGTVDE 167          
BLAST of mRNA_H-elongata_contig155307.3621.1 vs. uniprot
Match: A0A2A2JVN8_9BILA (Uncharacterized protein n=3 Tax=Diploscapter pachys TaxID=2018661 RepID=A0A2A2JVN8_9BILA)

HSP 1 Score: 63.5 bits (153), Expect = 3.120e-10
Identity = 26/55 (47.27%), Postives = 39/55 (70.91%), Query Frame = 0
Query:    1 KVAFARHLNHNLIGDPFLKHLMPLDSDGADLFHKFHDGVLLCRLVCMAVPGSIGK 55
            + AF+  +N NL GDP LK L+P+  D  DL+ K  DG++LC+L+ +AVPG+I +
Sbjct:  112 ETAFSNWINSNLSGDPDLKRLLPVTLDNGDLYEKVQDGLILCKLINLAVPGTIDE 166          
BLAST of mRNA_H-elongata_contig155307.3621.1 vs. uniprot
Match: A0A1U8KZ87_GOSHI (fimbrin-1-like n=24 Tax=Malvoideae TaxID=214907 RepID=A0A1U8KZ87_GOSHI)

HSP 1 Score: 63.5 bits (153), Expect = 3.130e-10
Identity = 28/55 (50.91%), Postives = 37/55 (67.27%), Query Frame = 0
Query:    1 KVAFARHLNHNLIGDPFLKHLMPLDSDGADLFHKFHDGVLLCRLVCMAVPGSIGK 55
            K ++  H+N  L  DPFLK  +PLD    DLFH   DGVLLC+L+ +AVPG+I +
Sbjct:  125 KASYVTHINIYLADDPFLKQFLPLDPATNDLFHLAKDGVLLCKLINVAVPGTIDE 179          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig155307.3621.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FJH8_ECTSI2.320e-1869.81Fimbrin n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FJH8... [more]
A0A1J3IPI9_NOCCA1.370e-1150.91Fimbrin-1 n=1 Tax=Noccaea caerulescens TaxID=10724... [more]
UPI000B780FD01.520e-1050.91fimbrin-1-like n=1 Tax=Hevea brasiliensis TaxID=39... [more]
A0A3B6NQT3_WHEAT1.650e-1049.09Uncharacterized protein n=10 Tax=Triticinae TaxID=... [more]
A0A6I9QS00_ELAGV1.680e-1052.83fimbrin-4 n=2 Tax=Arecaceae TaxID=4710 RepID=A0A6I... [more]
A0A0A9K4V4_ARUDO1.740e-1049.09Calponin-homology (CH) domain-containing protein n... [more]
A0A7J9BBW5_GOSGO3.100e-1050.91Uncharacterized protein n=2 Tax=Gossypium TaxID=36... [more]
A0A2A6BI66_PRIPA3.120e-1045.45Plst-1 n=2 Tax=Pristionchus pacificus TaxID=54126 ... [more]
A0A2A2JVN8_9BILA3.120e-1047.27Uncharacterized protein n=3 Tax=Diploscapter pachy... [more]
A0A1U8KZ87_GOSHI3.130e-1050.91fimbrin-1-like n=24 Tax=Malvoideae TaxID=214907 Re... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036872CH domain superfamilyGENE3D1.10.418.10coord: 1..58
e-value: 3.2E-10
score: 41.9
IPR036872CH domain superfamilySUPERFAMILY47576Calponin-homology domain, CH-domaincoord: 2..53
NoneNo IPR availablePANTHERPTHR19961:SF64FIMBRIN-3coord: 2..54
NoneNo IPR availableTMHMMTMhelixcoord: 39..61
IPR039959Fimbrin/PlastinPANTHERPTHR19961FIMBRIN/PLASTINcoord: 2..54

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig155307contigH-elongata_contig155307:174..362 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig155307.3621.1mRNA_H-elongata_contig155307.3621.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig155307 174..362 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig155307.3621.1 ID=prot_H-elongata_contig155307.3621.1|Name=mRNA_H-elongata_contig155307.3621.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=63bp
KVAFARHLNHNLIGDPFLKHLMPLDSDGADLFHKFHDGVLLCRLVCMAVP
GSIGKLYGVWAA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036872CH_dom_sf
IPR039959Fimbrin/Plastin