prot_H-elongata_contig1540.3561.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig1540.3561.1
Unique Nameprot_H-elongata_contig1540.3561.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length832
Homology
BLAST of mRNA_H-elongata_contig1540.3561.1 vs. uniprot
Match: A0A6H5KE27_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KE27_9PHAE)

HSP 1 Score: 676 bits (1743), Expect = 6.110e-229
Identity = 438/953 (45.96%), Postives = 527/953 (55.30%), Query Frame = 0
Query:    3 RSSRSIIETVARYPSGLTEAIILAELELMWRRDVRGAFVPGKLRGYLDAQYAPLSDVVQASIVRHSDQLVTIAEDHSGSVAVDGQSPATAGMYLHQNFKSCLHFLQQSGHDLLAPRRRVRLTGCRMLTGATINAGYGGV--------RKSQAVVG-STLLLTEYLAFVLDHRRSEDVMLARGAFGSTRVRETLSEVSNQRPFFLLCKVVEIRRPRQYHQDRAAGPARKKRLAVQTIVLECAVTGRKSRGGPCGRGHGGGDGVGADRSEAADGDAENGVEGEKETALLHLWDDQMCLASLFARGDGLAIYWPWVVEEDGEGGVLRSS---LGSSQLPVALHSQQGFAFESLT-PRLT-GWHYEYGSATALFVLPQESRESLFAAANGYSALDASTA----------------------VVA--------VCVNPREALPGSNTGPMRASDMPIDENGVRDLLQYPRRLSMADISPNMSNVSVYGQVVSVG-VPTTPLPAVLPTHSGPASATRGSLSQ-PQSKQLLLQQSASRAE------GIM--------------VFEVVIRNAGGEARVLCLGQEAVADALLCRPGHFVLACGLRTLSPAFPPL---ESHPGNGVVIVCGEPEVFIE----GTSTYAGNGNLGGRAGTHRGIGGR-SRILNASRLEGLLHCPFMSRHALLYSQTREAQPVATFACKVAVTWARWAFDGDGLWPVHRLCRARLPCHYEDLEASSVDSARMTGRKRFREIREPGGTRDLSA---QEALVTCPLCKS----------------------------------------------PVKLACPDEAELAYAPLLLALDDGSRCIVAECLDEVVLAALGGLHTNVFLQMTDGERRATLTSLIGRELRCVVGGNGSGVERNSAKGKVRGDCEGREGRDDESWWSG---VEYRVERIALANPAADLTHLL 829
            R   ++IETV RYPSGLTEA+ILAELEL+WRRDVRGAFVPGKL+ YLDAQYAPLSDV+QA +VRHSDQLVT+ EDHS SV+    SPA   MYLHQNFK CL + Q  GHDLLAP R+VRLTGCR+LTGA                 R+S    G STLLLTEYLAFVLDHRRS+D+ LA+G FG  RV+ T  E SN   FF++CK                   RK++                                                   +ET L HLWD+Q CL SLF +GDGL +YWPW+V E       RSS    GS+  P  L SQQ      L  PR + GWH+EYGSATALFVLP+ESR  LF+AAN  S  D  +                       VVA          VN R    G   G +   +MPIDENGVRD+LQ+PRRL + D++PN+SN S+YGQVVSV  VP + LPA+LP   G +S +  SLSQ P    +L+QQ   + +      G++              V E++IR+  G ARVLC G++A ADAL CRPG +VL CGLRT + AFPP    E  P   VV++CGE E         T+   G    G RAG   G G   S +LN S LEG LHCPF+SRH+LL+ + R   P A+FACK AVTWARW FDGDGLW VHR C ARLPCH+  L AS+ D AR T RKR R++REPG  R+      Q   V CPLC++                                               V++AC DEAEL YAPLLLALDDG+RC+VAEC   VV AA GG++ + FLQM + ER+AT+ SL+GRE+RCVVGG G+  E                    E  W G   V  RVERIA  NPAADL +L+
Sbjct:   12 RGHTTLIETVRRYPSGLTEAVILAELELLWRRDVRGAFVPGKLQAYLDAQYAPLSDVIQACVVRHSDQLVTLVEDHSCSVS-SNLSPAKVDMYLHQNFKPCLRYAQGVGHDLLAPGRKVRLTGCRLLTGAAXXXXXXXXXXXXXXXXRRSPNCGGPSTLLLTEYLAFVLDHRRSDDLRLAQGMFGGQRVKNTFEEKSNYEEFFVICK------------------GRKQQHXXXXXXXXXXXXXXXXX---------------------------------RETVLFHLWDEQTCLTSLFRKGDGLGVYWPWLVREQQP----RSSGGDQGSAAAPGGLPSQQQLVSSQLPLPRASSGWHFEYGSATALFVLPRESRAQLFSAANEDSNGDGFSTGGPGVESRSSXXXXXXXXXXXXVVASRKAFSRGAVVNGRGR--GGTVGAVH--EMPIDENGVRDVLQFPRRLFVTDLAPNLSNASIYGQVVSVASVPGSSLPAILPPSRGMSSLS-SSLSQLPLKPVMLMQQELQQLQQQESGMGLVAGRGAXXXXXXXXKVVELLIRDDRGTARVLCCGRKAAADALRCRPGQYVLVCGLRTFAAAFPPSDDSEQGPDGHVVVLCGEAEDMSREDAAATTGAEGRAAAGARAGEAGGGGDSVSGVLNTSSLEGFLHCPFLSRHSLLHDRRRTPGPRASFACKAAVTWARWTFDGDGLWAVHRRCGARLPCHFSALGASA-DPARRTSRKRQRDMREPGCVRNGGTGARQGVSVMCPLCQAGVSASLSSSQFTFVHDTAAAVLTVALISFCHWACVVARARRLLRQRSVRVACADEAELGYAPLLLALDDGTRCLVAECRSAVVSAAFGGMNAHDFLQMDEAERKATVDSLVGREIRCVVGGGGAASEVXXXXXXXXXXX------XXEGDWDGAGRVGLRVERIASVNPAADLAYLV 896          
BLAST of mRNA_H-elongata_contig1540.3561.1 vs. uniprot
Match: D7FQ83_ECTSI (CDC24_OB1 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQ83_ECTSI)

HSP 1 Score: 469 bits (1206), Expect = 4.740e-150
Identity = 346/903 (38.32%), Postives = 428/903 (47.40%), Query Frame = 0
Query:    1 WRRSSRSIIETVARYPSGLTEAIILAELELMWRRDVRGAFVPGKLRGYLDAQYAPLSDVVQASIVRHSDQLVTIAEDHSGSVAVDGQSPATAGMYLHQNFKSCLHFLQQSGHDLLAPRRRVRLTGCRMLTGATINAGYGGVRKSQAVVG---------STLLLTEYLAFVLDHRRSEDVMLARGAFGSTRVRETLSEVSNQRPFFLLCKVVEIRRPRQYHQDRAAGPARKKRLAVQTIVLECAVTGRKSRGGPCGRGHGGGDGVGADRSEAADGDAENGVEGEKETALLHLWDDQMCLASLFARGDGLAIYWPWVVEEDGEGGVLRSS---LGSSQLPVALHSQQGFAFESLT--PRLTGWHYEYGSATALFVLPQESRESLFAAANGYSALDASTA------------------------VVAVCVNPREA-LPGSNTGPM--RASDMPIDENGVRDLLQYPRRLSMADISPNMSNVSVYGQVVSVG-VPTTPLPAVLPTHSGPASATRGSLSQPQSKQLLLQQSASRAEGIM-------------------VFEVVIRNAGGEARVLCLGQEAVADALLCRPGHFVLACGLRTLSPAFPPL---ESHPGNGVVIVCGEPEVFIEGTSTYAGNGNLGGRAGTHRGIGGR-------SRILNASRLEGLLHCPFMSRHALLYSQTREAQPVATFACKVAVTWARWAFDGDGLWPVHRLCRARLPCHYEDLEASSVDSARMTGRKRFREIREPGGTRD--LSAQEAL-VTCPLCKSPVKLACPDEAELAYAPLLLALDDGSRCIVAECLDEVVLAALGGLHTNVFLQMTDGERRATLTSLIGRELRCVVGGNGSGVERNSAKGKVRGDCEGREGRDDESWWSGVEYRVERIALANPAADLTHLL 829
            W  + R++IETV RYPSGLTEA+ILAELEL+               G  +A   P S   +   +R + +  T +   S +   +                                        CR+LTGA                          STLLLTEYLAFVLDHRRS+D+ LA+G FG  RV++T  E SN   FF++CK                                                                                               GDGL +YWPW+V E       RSS    GS+  P  L SQQ      L       GWH+EYGSATALFVLP+ESR  LF+AAN  S  D  +                         VV+     R A + G   G     A +MP DENGVRDLLQ+PRRL + D++PNMSN S+YGQVVSV  VP + LPA+LP   G +S++  SLSQ   K ++L                              V E++IR+  G ARVLC G++A ADAL CRPG +VL CGLRT + AFPPL   E  P   VV++CGE E         A   +  GRA                S +LN S LEG LHCPF+SRH+ L+ + R   P A+ ACK AVTWARW FDGDGLW VHR C ARLPCH+  L AS+ D AR   RKR R++REPG  R     AQ+ + V CPLC+S V++AC DEAEL YAPLLLALDDG+RC+VAEC   VV AA GG++ + FLQM + ER+AT+ SL+GRE+RCVVGG+G+  E                          V  RVERIA  NPAADL +L+
Sbjct:   36 WSWTCRTLIETVRRYPSGLTEAVILAELELLCEGG-----------GTFEAPSCPES--FRPISMRSTPRCPTSSRRASFATLTNW---------------------------------------CRLLTGAXXXXXXXXXXXXXXXXXXXXXXXXXXSTLLLTEYLAFVLDHRRSDDLRLAQGMFGGLRVKDTFEEKSNYEEFFVVCK-----------------------------------------------------------------------------------------------GDGLGVYWPWLVREQQP----RSSGGDQGSAAAPGGLSSQQQLVSSQLPLPSDSFGWHFEYGSATALFVLPRESRAQLFSAANNDSNGDGFSTGGPGVESRSSXXXXXXXXXXXXXVVVSRKATSRGAGVDGRGRGGTVGAAHEMPADENGVRDLLQFPRRLFVTDLAPNMSNASIYGQVVSVASVPGSSLPAILPPSRGMSSSS-SSLSQLPLKPVMLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNVVELLIRDDRGTARVLCCGRKAAADALRCRPGQYVLVCGLRTFAAAFPPLDDSEQGPDGHVVVLCGEAEEMSR--EDAAATTDAEGRAAXXXXXXXXXXXXDSVSGVLNTSSLEGFLHCPFLSRHSFLHDRRRTPGPRASLACKAAVTWARWTFDGDGLWAVHRRCGARLPCHFSALGASA-DPARRISRKRPRDMREPGCVRSGRTGAQQGVSVICPLCQSSVRVACADEAELGYAPLLLALDDGTRCLVAECRSAVVTAAFGGMNAHDFLQMGEAERKATVDSLVGREIRCVVGGDGAASE---VXXXXXXXXXXXXXXXXXXXXXRVGLRVERIASVNPAADLAYLV 780          
BLAST of mRNA_H-elongata_contig1540.3561.1 vs. uniprot
Match: A0A507ECL1_9FUNG (Uncharacterized protein n=2 Tax=Spizellomyces TaxID=4815 RepID=A0A507ECL1_9FUNG)

HSP 1 Score: 90.1 bits (222), Expect = 6.320e-15
Identity = 112/446 (25.11%), Postives = 167/446 (37.44%), Query Frame = 0
Query:    1 WRRSSRSIIETVARYPSGLTEAIILAELELMWRRDVRGAFVPGKLRGYLDAQYAPLSDVVQASIVRHSDQLVTIAEDHSGSVAVDGQSPATAGMYLHQNFKSCLHFLQQSGHDLLAPRRRVRLTGCRMLTGATINAGYGGVRKSQAVVGSTLLLTEYLAFVLDHRRSEDVMLARGAFGSTRVRETLSEVSNQRPFFLLCKVVEIRRPRQYHQDRAAGPARKKRLAVQTIVLECAVTGRKSRGGPCGRGHGGGDGVGADRSEAADGDAENGVEGEKETALLHLWDDQMCLASLFARGDGLAIYWPWVVEEDGEGGVLRSSLGSSQLPVALHSQQGFAFESLTPRLTGWHYEYGSATALFVLPQESRESLFAAANGYSALDASTAVVAVCVNPREALPGSNTGPMRASDMPIDENGVRDLLQYPRRLSMADISPNMSNVSVYGQVVSV 446
            W      ++  + +YPSGLTEAI+ AELE+ W                             +S VR     +T++         D  S  +  MYLHQ F  C    + +G  L     +VR+TG R +T                V G+ LL TE++ F+L     +D       F  +      ++V   R F  L KV +I      H  R+ G  R KRL V   V + +V                                       +E A L LWD+Q+ LASLF +GD LAI+ P+V  E   G   R    S  L                        EYGS T +FV+P +  + +                        E +    + P + + +P D  G+ D   YPRRL + +++P M N++++G+V+ V
Sbjct:   49 WSWVFTRLLVLLGQYPSGLTEAIVNAELEMQWDEC--------------------------SSEVRRGVSKLTLS---------DPGSRRSIDMYLHQKF--CFLADECAGGFL----EKVRITGTRSVT--------------TPVGGTRLLPTEHMVFLLSESDDQDKKFLSDRFDESLSHVAAADVEEGRSFAFLVKVHQIG---TVHAARSHG--RLKRLHV--YVNDTSV---------------------------------------EENACLVLWDEQIGLASLFRKGDWLAIWRPYVTVERQAG---RDDTRSITL------------------------EYGSQTVIFVIPMDPTKEM------------------------ELMCSMASQPSQHA-VPRDARGILDFKWYPRRLLVTELAPKMINITIFGKVLEV 341          
BLAST of mRNA_H-elongata_contig1540.3561.1 vs. uniprot
Match: UPI00077AD99D (uncharacterized protein LOC107341862 n=1 Tax=Acropora digitifera TaxID=70779 RepID=UPI00077AD99D)

HSP 1 Score: 61.6 bits (148), Expect = 4.350e-6
Identity = 92/452 (20.35%), Postives = 168/452 (37.17%), Query Frame = 0
Query:    8 IIETVARYPSGLTEAIILAELELMWRR--DVRGAFVPGKLR-----GYLDAQYAPLSDVVQASIVRHSDQLVTIAEDHSG-SVAVDGQSPATAGMYLHQNFKSCLHFLQQSGHDLLAPRRRVRLTGCRMLTGATINAGYGGVRKSQAVVGSTLLLTEYLAFVLDHRRSEDVMLARGAFGSTRVRETLSEVSNQRPFF---LLCKVVEIRRPRQYHQDRAAGPARKKRLAVQTIVLECAVTGRKSRGGPCGRGHGGGDGVGADRSEAADGDAENGVEGEKETALLHLWDDQMCLASLFARGDGLAIYWPWVVEEDGEGGVLRSSLGSSQLPVALHSQQGFAFESLTPRLTGWHYEYGSATALFVLPQESRESLFAAANGYSALDASTAVVAVCVNPREALPGSNTGPMRASDMPIDENGVRDLLQYPRRLSMADISPNMSNVSVYGQVVSVGV 448
            ++  ++RYPSG+T+AIILAE++  W +    +G F   K R        ++++     +++A++    +++ T+   H+  ++  D +   T GMYLHQ  K CL  LQ+     L  +  +R T CR++ G  ++     V          LL +E +  + + +  E      G+F        L+     RP     +  +V ++      H               QT +  C                                     V+ E       LWD+Q+ +A+LF  GD LA+  P+VV    E  +L                                 E G +T +F +P +  + L +                   +   +  G+    M+      D  G+ D   +P ++  +D+ PNM+ V+++  + SVG+
Sbjct:   32 LVSLLSRYPSGITKAIILAEIQQSWNQFSQFQGRFEEQKARKVSVDSVTESRHIGYESILEATV----EKIETVPGTHTNIAILRDRKGRNTLGMYLHQ--KLCL--LQEE----LIKKLTLRFTSCRLVQGKGLSFAGHKVH---------LLPSENVVILCEEQDWEKFDNNFGSF--------LAIDDTSRPHHGPNVKVEVADMGFEETVHSPNG-----------QTSIRRCIRV----------------------------------VDSEGIHVSFCLWDEQLPMANLFKEGDTLALQQPFVVPNQDELFLL---------------------------------ECGPSTLIFCMPHDPLQELVS-------------------SQMSSTQGTPVSVMK------DNQGMLDYSSFPEQIFFSDVRPNMTRVTIFCTITSVGL 351          
BLAST of mRNA_H-elongata_contig1540.3561.1 vs. uniprot
Match: UPI00106BFA99 (uncharacterized protein LOC114525665 n=1 Tax=Dendronephthya gigantea TaxID=151771 RepID=UPI00106BFA99)

HSP 1 Score: 60.1 bits (144), Expect = 1.470e-5
Identity = 98/460 (21.30%), Postives = 165/460 (35.87%), Query Frame = 0
Query:    1 WRRSSRSIIETVARYPSGLTEAIILAELELMWRRDVR-----GAFVPGKLRGYLDAQYAPLSDVVQASI-----VRHSDQLVTIAEDHSGSVAVDGQSPATAGMYLHQNFKSCLHFLQQSGHDLLAPRRRVRLTGCRMLTGATINAGYGGVRKSQAVVGSTLLLTEYLAFVLDHRRSEDVMLARGAFGSTRVRETLSEVSNQRPF--FLLCKVVEIRRPRQYHQDRAAGPARKKRLAVQTIVLECAVTGRKSRGGPCGRGHGGGDGVGADRSEAADGDAENGVEGEKETALLHLWDDQMCLASLFARGDGLAIYWPWVVEEDGEGGVLRSSLGSSQLPVALHSQQGFAFESLTPRLTGWHYEYGSATALFVLPQESRESLFAAANGYSALDASTAVVAVCVNPREALPGSNTGPMRASDMPIDENGVRDLLQYPRRLSMADISPNMSNVSVYGQVVSVGV 448
            W      ++  ++RYP+G+T+AI+L+ELE  WR+  +     G      LR  + +++     V +  +     V  +   V +  +H  S     +   T  MYLHQ     +  +  +G+ L       R TGCR+  G          R+++++    LL +E  +FV        V++  GA  +    E L E+ + +     +  KV EI   +  H        R   L    I ++                                             A L+LW++ + +A LF  GD L +   +++ +  E   L                                 E+G  T +F  P                            + +E LP    G  +   +  D  G+ D   YP RLS+++I+ NMSN+++ GQVVSVGV
Sbjct:   25 WGWFFTKLVTLLSRYPTGVTKAIMLSELECSWRKIEKLQAKGGMNSADSLRSIVLSRHLSPQAVFEVFLKEVKNVEATQTRVAVLMEHETS----SEHSFTMEMYLHQKLYGEVEQIMANGYKL-------RFTGCRLFDG----------RRNKSL---KLLPSE--SFV--------VLVNDGAIHNFTTLEGLDEMIDSQYINSIIKVKVSEISMKKSIHCQNGHTANRITVLVSDDIGIQ---------------------------------------------AKLNLWEEYLVMAKLFEAGDTLFMKQCFLLPDKSECFTL---------------------------------EFGPETIIFCQP--------------------------LTHEQEILPSQRDG-SKVFYVSKDNRGMLDFSMYPERLSISEINQNMSNITLTGQVVSVGV 345          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig1540.3561.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
A0A6H5KE27_9PHAE6.110e-22945.96Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FQ83_ECTSI4.740e-15038.32CDC24_OB1 domain-containing protein n=1 Tax=Ectoca... [more]
A0A507ECL1_9FUNG6.320e-1525.11Uncharacterized protein n=2 Tax=Spizellomyces TaxI... [more]
UPI00077AD99D4.350e-620.35uncharacterized protein LOC107341862 n=1 Tax=Acrop... [more]
UPI00106BFA991.470e-521.30uncharacterized protein LOC114525665 n=1 Tax=Dendr... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR035200Cell division control protein 24, OB domain 2PFAMPF17245CDC24_OB2coord: 85..208
e-value: 1.2E-13
score: 51.8
IPR035201Cell division control protein 24, OB domain 1PFAMPF17246CDC24_OB1coord: 7..37
e-value: 3.1E-6
score: 27.3
NoneNo IPR availablePANTHERPTHR36033FAMILY NOT NAMEDcoord: 85..446

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig1540contigH-elongata_contig1540:8659..15187 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig1540.3561.1mRNA_H-elongata_contig1540.3561.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig1540 8659..15187 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig1540.3561.1 ID=prot_H-elongata_contig1540.3561.1|Name=mRNA_H-elongata_contig1540.3561.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=832bp
WRRSSRSIIETVARYPSGLTEAIILAELELMWRRDVRGAFVPGKLRGYLD
AQYAPLSDVVQASIVRHSDQLVTIAEDHSGSVAVDGQSPATAGMYLHQNF
KSCLHFLQQSGHDLLAPRRRVRLTGCRMLTGATINAGYGGVRKSQAVVGS
TLLLTEYLAFVLDHRRSEDVMLARGAFGSTRVRETLSEVSNQRPFFLLCK
VVEIRRPRQYHQDRAAGPARKKRLAVQTIVLECAVTGRKSRGGPCGRGHG
GGDGVGADRSEAADGDAENGVEGEKETALLHLWDDQMCLASLFARGDGLA
IYWPWVVEEDGEGGVLRSSLGSSQLPVALHSQQGFAFESLTPRLTGWHYE
YGSATALFVLPQESRESLFAAANGYSALDASTAVVAVCVNPREALPGSNT
GPMRASDMPIDENGVRDLLQYPRRLSMADISPNMSNVSVYGQVVSVGVPT
TPLPAVLPTHSGPASATRGSLSQPQSKQLLLQQSASRAEGIMVFEVVIRN
AGGEARVLCLGQEAVADALLCRPGHFVLACGLRTLSPAFPPLESHPGNGV
VIVCGEPEVFIEGTSTYAGNGNLGGRAGTHRGIGGRSRILNASRLEGLLH
CPFMSRHALLYSQTREAQPVATFACKVAVTWARWAFDGDGLWPVHRLCRA
RLPCHYEDLEASSVDSARMTGRKRFREIREPGGTRDLSAQEALVTCPLCK
SPVKLACPDEAELAYAPLLLALDDGSRCIVAECLDEVVLAALGGLHTNVF
LQMTDGERRATLTSLIGRELRCVVGGNGSGVERNSAKGKVRGDCEGREGR
DDESWWSGVEYRVERIALANPAADLTHLLRS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR035200Cdc24_OB2
IPR035201Cdc24_OB1