prot_H-elongata_contig153709.3544.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig153709.3544.1
Unique Nameprot_H-elongata_contig153709.3544.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length70
Homology
BLAST of mRNA_H-elongata_contig153709.3544.1 vs. uniprot
Match: D7G5X0_ECTSI (Putative homoaconitate hydratase, N-terminal part n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5X0_ECTSI)

HSP 1 Score: 121 bits (303), Expect = 2.980e-32
Identity = 59/61 (96.72%), Postives = 61/61 (100.00%), Query Frame = 0
Query:    6 KVLFGTDSHTCNAGAFGQFATGIGNTDASFVMGTGKLLIKSPASMQFSLEGEIPDHLLAKV 66
            +VLFGTDSHTCNAGAFGQFATGIGNTDASFVMGTGKLLIKSPASMQF+LEGEIPDHLLAKV
Sbjct:  210 EVLFGTDSHTCNAGAFGQFATGIGNTDASFVMGTGKLLIKSPASMQFALEGEIPDHLLAKV 270          
BLAST of mRNA_H-elongata_contig153709.3544.1 vs. uniprot
Match: A0A6H5KHV3_9PHAE (3-isopropylmalate dehydratase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KHV3_9PHAE)

HSP 1 Score: 119 bits (299), Expect = 4.080e-30
Identity = 58/60 (96.67%), Postives = 60/60 (100.00%), Query Frame = 0
Query:    6 KVLFGTDSHTCNAGAFGQFATGIGNTDASFVMGTGKLLIKSPASMQFSLEGEIPDHLLAK 65
            +VLFGTDSHTCNAGAFGQFATGIGNTDASFVMGTGKLLIKSPASMQF+LEGEIPDHLLAK
Sbjct:  200 EVLFGTDSHTCNAGAFGQFATGIGNTDASFVMGTGKLLIKSPASMQFALEGEIPDHLLAK 259          
BLAST of mRNA_H-elongata_contig153709.3544.1 vs. uniprot
Match: X2KY86_SCYLO (3-isopropylmalate dehydratase n=1 Tax=Scytosiphon lomentaria TaxID=27967 RepID=X2KY86_SCYLO)

HSP 1 Score: 118 bits (296), Expect = 1.210e-29
Identity = 57/60 (95.00%), Postives = 60/60 (100.00%), Query Frame = 0
Query:    6 KVLFGTDSHTCNAGAFGQFATGIGNTDASFVMGTGKLLIKSPASMQFSLEGEIPDHLLAK 65
            +VLFGTDSHTCNAGAFGQFATGIGNTDASFVMGTGKLLIKSPASMQF+LEGE+PDHLLAK
Sbjct:  219 EVLFGTDSHTCNAGAFGQFATGIGNTDASFVMGTGKLLIKSPASMQFALEGEMPDHLLAK 278          
BLAST of mRNA_H-elongata_contig153709.3544.1 vs. uniprot
Match: A0A835YVF1_9STRA (3-isopropylmalate dehydratase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YVF1_9STRA)

HSP 1 Score: 113 bits (283), Expect = 4.840e-28
Identity = 54/65 (83.08%), Postives = 61/65 (93.85%), Query Frame = 0
Query:    1 YCLSVKVLFGTDSHTCNAGAFGQFATGIGNTDASFVMGTGKLLIKSPASMQFSLEGEIPDHLLAK 65
            +C   +VLFGTDSHTCNAGAFGQFATGIGNTDASFVMGTGKLLIK+PA+M+F+L GEIPD+LLAK
Sbjct:  143 HCRPGEVLFGTDSHTCNAGAFGQFATGIGNTDASFVMGTGKLLIKTPATMRFALNGEIPDYLLAK 207          
BLAST of mRNA_H-elongata_contig153709.3544.1 vs. uniprot
Match: A0A6M0CDJ2_9CYAN (3-isopropylmalate dehydratase (Fragment) n=1 Tax=Okeania sp. SIO2H7 TaxID=2607802 RepID=A0A6M0CDJ2_9CYAN)

HSP 1 Score: 106 bits (264), Expect = 1.220e-26
Identity = 49/60 (81.67%), Postives = 57/60 (95.00%), Query Frame = 0
Query:    6 KVLFGTDSHTCNAGAFGQFATGIGNTDASFVMGTGKLLIKSPASMQFSLEGEIPDHLLAK 65
            +VLFGTDSHTCNAGAFGQFATGIGNTDA+F+MGTGKLL+K PA+M+F L GE+PD+LLAK
Sbjct:  129 EVLFGTDSHTCNAGAFGQFATGIGNTDAAFIMGTGKLLVKVPATMRFVLNGEMPDYLLAK 188          
BLAST of mRNA_H-elongata_contig153709.3544.1 vs. uniprot
Match: W7TZ20_9STRA (3-isopropylmalate dehydratase n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TZ20_9STRA)

HSP 1 Score: 108 bits (269), Expect = 5.840e-26
Identity = 51/60 (85.00%), Postives = 57/60 (95.00%), Query Frame = 0
Query:    6 KVLFGTDSHTCNAGAFGQFATGIGNTDASFVMGTGKLLIKSPASMQFSLEGEIPDHLLAK 65
            +VLFGTDSHTCNAGAFGQFATGIGNTDA+FV+GTGKLL+K PASM+F L GEIPD+LLAK
Sbjct:  182 EVLFGTDSHTCNAGAFGQFATGIGNTDAAFVLGTGKLLLKVPASMKFELNGEIPDYLLAK 241          
BLAST of mRNA_H-elongata_contig153709.3544.1 vs. uniprot
Match: K9SF49_9CYAN (Homoaconitate hydratase family protein n=1 Tax=Pseudanabaena sp. PCC 7367 TaxID=82654 RepID=K9SF49_9CYAN)

HSP 1 Score: 107 bits (267), Expect = 6.660e-26
Identity = 50/60 (83.33%), Postives = 57/60 (95.00%), Query Frame = 0
Query:    6 KVLFGTDSHTCNAGAFGQFATGIGNTDASFVMGTGKLLIKSPASMQFSLEGEIPDHLLAK 65
            +VLFGTDSHTCNAGAFGQFATGIGNTDA+FVMGTGKLL+K PA+M+F+ EGE+P HLLAK
Sbjct:  129 EVLFGTDSHTCNAGAFGQFATGIGNTDAAFVMGTGKLLLKVPATMRFTFEGEMPPHLLAK 188          
BLAST of mRNA_H-elongata_contig153709.3544.1 vs. uniprot
Match: A0A383VB52_TETOB (Aconitase domain-containing protein (Fragment) n=1 Tax=Tetradesmus obliquus TaxID=3088 RepID=A0A383VB52_TETOB)

HSP 1 Score: 103 bits (258), Expect = 6.990e-26
Identity = 47/65 (72.31%), Postives = 58/65 (89.23%), Query Frame = 0
Query:    1 YCLSVKVLFGTDSHTCNAGAFGQFATGIGNTDASFVMGTGKLLIKSPASMQFSLEGEIPDHLLAK 65
            +C   +VLFGTDSHTCNAGAFGQFATG+GNTDA F++GTGKLLIK P +M+F L+GE+P++LLAK
Sbjct:  172 HCKPGEVLFGTDSHTCNAGAFGQFATGVGNTDAGFILGTGKLLIKVPPTMRFVLDGEMPEYLLAK 236          
BLAST of mRNA_H-elongata_contig153709.3544.1 vs. uniprot
Match: A0A6P1AAH6_9CYAN (3-isopropylmalate dehydratase large subunit n=2 Tax=Oscillatoriales TaxID=1150 RepID=A0A6P1AAH6_9CYAN)

HSP 1 Score: 107 bits (266), Expect = 9.160e-26
Identity = 50/60 (83.33%), Postives = 57/60 (95.00%), Query Frame = 0
Query:    6 KVLFGTDSHTCNAGAFGQFATGIGNTDASFVMGTGKLLIKSPASMQFSLEGEIPDHLLAK 65
            +VLFGTDSHTCNAGAFGQFATGIGNTDA F+MGTGKLLIK PA+M+F L+GE+PD+LLAK
Sbjct:  129 EVLFGTDSHTCNAGAFGQFATGIGNTDAGFIMGTGKLLIKVPATMRFVLDGEMPDYLLAK 188          
BLAST of mRNA_H-elongata_contig153709.3544.1 vs. uniprot
Match: A0A2V0NV93_9CHLO (3-isopropylmalate dehydratase n=1 Tax=Raphidocelis subcapitata TaxID=307507 RepID=A0A2V0NV93_9CHLO)

HSP 1 Score: 106 bits (265), Expect = 1.730e-25
Identity = 49/65 (75.38%), Postives = 58/65 (89.23%), Query Frame = 0
Query:    1 YCLSVKVLFGTDSHTCNAGAFGQFATGIGNTDASFVMGTGKLLIKSPASMQFSLEGEIPDHLLAK 65
            +C   +VLFGTDSHTCNAGAFGQFATG+GNTDA F++GTGKLLIK P +M+F LEGE+PD+LLAK
Sbjct:  162 HCKPGEVLFGTDSHTCNAGAFGQFATGVGNTDAGFILGTGKLLIKVPPTMRFLLEGEMPDYLLAK 226          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig153709.3544.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G5X0_ECTSI2.980e-3296.72Putative homoaconitate hydratase, N-terminal part ... [more]
A0A6H5KHV3_9PHAE4.080e-3096.673-isopropylmalate dehydratase n=1 Tax=Ectocarpus s... [more]
X2KY86_SCYLO1.210e-2995.003-isopropylmalate dehydratase n=1 Tax=Scytosiphon ... [more]
A0A835YVF1_9STRA4.840e-2883.083-isopropylmalate dehydratase n=1 Tax=Tribonema mi... [more]
A0A6M0CDJ2_9CYAN1.220e-2681.673-isopropylmalate dehydratase (Fragment) n=1 Tax=O... [more]
W7TZ20_9STRA5.840e-2685.003-isopropylmalate dehydratase n=2 Tax=Monodopsidac... [more]
K9SF49_9CYAN6.660e-2683.33Homoaconitate hydratase family protein n=1 Tax=Pse... [more]
A0A383VB52_TETOB6.990e-2672.31Aconitase domain-containing protein (Fragment) n=1... [more]
A0A6P1AAH6_9CYAN9.160e-2683.333-isopropylmalate dehydratase large subunit n=2 Ta... [more]
A0A2V0NV93_9CHLO1.730e-2575.383-isopropylmalate dehydratase n=1 Tax=Raphidocelis... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.30.499.20coord: 1..68
e-value: 1.1E-19
score: 72.5
NoneNo IPR availablePANTHERPTHR43822FAMILY NOT NAMEDcoord: 2..65
NoneNo IPR availablePANTHERPTHR43822:SF23-ISOPROPYLMALATE DEHYDRATASE LARGE SUBUNIT, CHLOROPLASTICcoord: 2..65
IPR001030Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domainPFAMPF00330Aconitasecoord: 6..65
e-value: 1.6E-14
score: 53.7
IPR036008Aconitase, iron-sulfur domainSUPERFAMILY53732Aconitase iron-sulfur domaincoord: 7..65

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig153709contigH-elongata_contig153709:287..496 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig153709.3544.1mRNA_H-elongata_contig153709.3544.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig153709 287..496 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig153709.3544.1 ID=prot_H-elongata_contig153709.3544.1|Name=mRNA_H-elongata_contig153709.3544.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=70bp
YCLSVKVLFGTDSHTCNAGAFGQFATGIGNTDASFVMGTGKLLIKSPASM
QFSLEGEIPDHLLAKVDLL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001030Acoase/IPM_deHydtase_lsu_aba
IPR036008Aconitase_4Fe-4S_dom