prot_H-elongata_contig15370.3543.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig15370.3543.1
Unique Nameprot_H-elongata_contig15370.3543.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length511
Homology
BLAST of mRNA_H-elongata_contig15370.3543.1 vs. uniprot
Match: D7FPZ3_ECTSI (Cryptochrome DASH n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FPZ3_ECTSI)

HSP 1 Score: 673 bits (1737), Expect = 6.910e-238
Identity = 332/454 (73.13%), Postives = 367/454 (80.84%), Query Frame = 0
Query:    1 MSASRCRFLLESVADLQSRLRVQGSDLIVRCGYPEDVIPDLATKLGG-QATGTTLYTHTDVCSDEICVDNAVKRALTALT------GPPVAVKEIWGNTMHHLDDLPFDFPHALPNIFTQFRKAVEQR--CQIRTPVSAPGTLRPFPS--CGDGNAASIITEVPTLKQLGFEPAPEKDEMAVLLFKGGETAGLKRVRQYIWEEDRLRSYKETRNGLLGSGFSSKFSPWLALGCLSPKTIVSEIRKYERERIANDSTYWLIFELLWRDFFCYSAVKNGNSIFHLGGPRHDAKRQVWRDDAGSLEAWKTGETGYPFIDANMRELKASGFMSNRGRQVVASFFTKDLGMDWRLGAEHFEEHLLDHDPASNWGNWNYVAGVGSDPREDRYFNIEKQAKTYDPEGEYIRHWLPELAALPTTALQARRILSPGGITTMLRHLHNLPVRIYPDPIVPLKFS 443
            MSA+RCRFLLESVADL++RLR +GSDL+VR G+PEDVIP LA +LGG    G TL+ HTDVCS+E  V  AVK AL A +      G  VAVKE WGNT+H + DLPFDFP  +P IFTQFRK+VE +  C++R PV  P   RP P+    D   AS    +PT ++LG   APE+D  +V  F GGETAGL+RV+ YIW+EDRLR YK TRNGLLGSGFSSKFSPWLALGCLSP+TIV EIRKYE +RIANDSTYWLIFELLWRDFF YSAVKNGNSIFHLGGPR D  RQ W DDAGSLEAWK GETGYP IDANMRELKASGFMSNRGRQVVASFFT+DL MDWRLGAEHFEE+LLDHDPASNWGNWNYVAGVGSDPRE RYFNIEKQAKTYD EG Y+RHWLPELAALPTTALQ     +PGGITTMLRH+H +P  +YPDPI PLKFS
Sbjct:   73 MSAARCRFLLESVADLRARLRERGSDLLVRRGHPEDVIPALAARLGGGSVAGVTLFAHTDVCSEEADVHAAVKSALAAASSAGRGGGAAVAVKEAWGNTLHDVADLPFDFPSGVPEIFTQFRKSVESKYSCKMRPPVPLPSPFRPVPTGTTQDDGEASAPGAIPTTEELGLGTAPERDARSVFPFNGGETAGLRRVQSYIWDEDRLREYKVTRNGLLGSGFSSKFSPWLALGCLSPRTIVKEIRKYETDRIANDSTYWLIFELLWRDFFRYSAVKNGNSIFHLGGPRRDTGRQRWLDDAGSLEAWKEGETGYPLIDANMRELKASGFMSNRGRQVVASFFTRDLQMDWRLGAEHFEEYLLDHDPASNWGNWNYVAGVGSDPREGRYFNIEKQAKTYDAEGAYMRHWLPELAALPTTALQ-----TPGGITTMLRHMHAIPTSVYPDPIAPLKFS 521          
BLAST of mRNA_H-elongata_contig15370.3543.1 vs. uniprot
Match: D7FPZ4_ECTSI (Cryptochrome DASH n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FPZ4_ECTSI)

HSP 1 Score: 630 bits (1625), Expect = 3.220e-221
Identity = 307/460 (66.74%), Postives = 360/460 (78.26%), Query Frame = 0
Query:    1 MSASRCRFLLESVADLQSRLRVQGSDLIVRCGYPEDVIPDLATKLGGQATGTTLYTHTDVCSDEICVDNAVKRALTAL----------TGPPVAVKEIWGNTMHHLDDLPFDFPHALPNIFTQFRKAVEQRCQIRTPVSAPGTLRPFPSCGDGNAAS--IITEVPTLKQLGFEPAPEKDEMAVLLFKGGETAGLKRVRQYIWEEDRLRSYKETRNGLLGSGFSSKFSPWLALGCLSPKTIVSEIRKYERERIANDSTYWLIFELLWRDFFCYSAVKNGNSIFHLGGPRHDAKRQVWRDDAGSLEAWKTGETGYPFIDANMRELKASGFMSNRGRQVVASFFTKDLGMDWRLGAEHFEEHLLDHDPASNWGNWNYVAGVGSDPREDRYFNIEKQAKTYDPEGEYIRHWLPELAALPTTALQARRILSPGGITTMLRHLHNLPVRIYPDPIVPLKFSTPWKG 448
            MSA+RCRFLLESVADLQ+RLR +GSDL++R G+PE+ IP +A +LG  A+  T+Y H D+CS+E  V  AVK AL+ +          TG  V+V E+WGNT+H   DLP+DFP+ LP +FT FRKAVE  C+IR+PV  P   RP P+    NA +  +   +PT ++LG   APE+D  +VL F GGETAGL+RV+ YIWEED LR YK TRNGLLG GFSSKFSPWLALGCLSP+TIV EIRKYE +RIANDSTYWLIFELL RDFF YSAVK GN+IFHLGG R D+ RQ WRDDAG L AWK G TGYPF+DANMRELKASGFMSNRGRQVVASFFTKDL MDWRLGAEHFEE+LLD+DPASN+GNWNYVAGVG DPREDRYF++EKQA+TYD +G+Y+RHWLPELA L T ALQ     S GGIT  LR +H++P  +YPDP+VPLKF  P +G
Sbjct:   72 MSAARCRFLLESVADLQTRLRAKGSDLLIRRGHPENAIPAVAARLGSGASAVTVYAHPDLCSEENDVHAAVKSALSLVGSAGGVGGDATG--VSVTEVWGNTLHDPSDLPYDFPNGLPEVFTPFRKAVEPNCKIRSPVPLPSPFRPLPAGLHDNAVTPTLTVAIPTTEELGLGTAPERDARSVLHFIGGETAGLRRVQTYIWEEDHLREYKVTRNGLLGGGFSSKFSPWLALGCLSPRTIVKEIRKYETDRIANDSTYWLIFELLVRDFFRYSAVKYGNAIFHLGGSRRDSDRQTWRDDAGLLAAWKEGRTGYPFVDANMRELKASGFMSNRGRQVVASFFTKDLEMDWRLGAEHFEEYLLDYDPASNYGNWNYVAGVGFDPREDRYFSVEKQARTYDADGDYVRHWLPELAMLTTEALQ-----SAGGITATLREVHSVPTSVYPDPVVPLKFMMPKEG 524          
BLAST of mRNA_H-elongata_contig15370.3543.1 vs. uniprot
Match: A9U403_PHYPA (Cryptochrome DASH n=2 Tax=Physcomitrium patens TaxID=3218 RepID=A9U403_PHYPA)

HSP 1 Score: 464 bits (1193), Expect = 1.130e-155
Identity = 226/449 (50.33%), Postives = 299/449 (66.59%), Query Frame = 0
Query:    5 RCRFLLESVADLQSRLRVQGSDLIVRCGYPEDVIPDLATKLGGQATGTTLYTHTDVCSDEICVDNAVKRALTALTGPP---VAVKEIWGNTMHHLDDLPFDFPHALPNIFTQFRKAVEQRCQIRTPVSAPGTLRPFPSCGDGNAASIITEVPTLKQLGFEPAPEKDEMAVLLFKGGETAGLKRVRQYIWEEDRLRSYKETRNGLLGSGFSSKFSPWLALGCLSPKTIVSEIRKYERERIANDSTYWLIFELLWRDFFCYSAVKNGNSIFHLGGPRHDAKRQVWRDDAGSLEAWKTGETGYPFIDANMRELKASGFMSNRGRQVVASFFTKDLGMDWRLGAEHFEEHLLDHDPASNWGNWNYVAGVGSDPREDRYFNIEKQAKTYDPEGEYIRHWLPELAALPTTALQARRILSPGGITTMLRHLHNLPVRIYPDPIVPLKFSTPWKGGK 450
            R +F++ESVA+L+  LR +G DLIVR G PEDV+P +A  +G      T+Y H + CS+E  V+  VKR L  L G P   + +  +WG T++HLDDLPF  P  LP+++TQFRK VE  C++R  +  P  + P P         +  ++PT+ +LG +   E+  + V+ F+GGETA L R++ Y W +D+L+ YKETRNG+LG+ +S+KFSPWLA GCLSP+TI  E+++YE ER+ANDSTYW++FEL+WRD+F + ++K GN+IFHLGGPR    ++ W  +    EAW+ G TGYP IDANM+EL A+GFMSNRGRQ+V SF  +DLG+DWR+G E FE  LLD+DP SN+GNW Y AGVG+DPREDRYF+I KQ+ TYDPEGEY+ HWLP L   P                       N P   Y  PIVPLKF     GGK
Sbjct:  118 RAQFIMESVANLRDNLRQRGLDLIVRQGKPEDVVPSIAKSIGAH----TVYAHKETCSEETTVETGVKRGLANLEGGPKMQIRLDFVWGGTLYHLDDLPFS-PSELPDVYTQFRKGVEYNCKVRPALKMPTQMGPLPESLSEKIGEL-GDIPTMAELGLKYR-EQSPLGVMHFEGGETAALARLQDYFWNKDQLKIYKETRNGMLGANYSTKFSPWLAHGCLSPRTIHDEVKRYETERVANDSTYWVLFELIWRDYFRFVSIKYGNAIFHLGGPRKVVGKR-WSQNRELFEAWREGRTGYPLIDANMKELAATGFMSNRGRQIVCSFLVRDLGLDWRMGGEWFETCLLDYDPCSNYGNWTYGAGVGNDPREDRYFSIPKQSATYDPEGEYVAHWLPSLKQSPPKQ-------------------RNFPGDAYLRPIVPLKFGM-GSGGK 538          
BLAST of mRNA_H-elongata_contig15370.3543.1 vs. uniprot
Match: A0A6I9RMC3_ELAGV (Cryptochrome DASH n=2 Tax=Arecaceae TaxID=4710 RepID=A0A6I9RMC3_ELAGV)

HSP 1 Score: 456 bits (1172), Expect = 3.270e-152
Identity = 231/451 (51.22%), Postives = 299/451 (66.30%), Query Frame = 0
Query:    3 ASRCRFLLESVADLQSRLRVQGSDLIVRCGYPEDVIPDLATKLGGQATGTTLYTHTDVCSDEICVDNAVKRALTALT---GPPVAVKE-------IWGNTMHHLDDLPFDFPHALPNIFTQFRKAVEQRCQIRTPVSAPGTLRPFPSCGDGNAASIITEVPTLKQLGFEPAPEKDEMAVLLFKGGETAGLKRVRQYIWEEDRLRSYKETRNGLLGSGFSSKFSPWLALGCLSPKTIVSEIRKYERERIANDSTYWLIFELLWRDFFCYSAVKNGNSIFHLGGPRHDAKRQVWRDDAGSLEAWKTGETGYPFIDANMRELKASGFMSNRGRQVVASFFTKDLGMDWRLGAEHFEEHLLDHDPASNWGNWNYVAGVGSDPREDRYFNIEKQAKTYDPEGEYIRHWLPELAALPTTALQARRILSPGGITTMLRHLHNLPVRIYPDPIVPLKFS 443
            A R +FL+ES+ADL+  L   G DL+VR G PED++P +A  LG      T+Y   + CS+E+ V+  V+R L  +    G     K        IWG+TM+H+DDLPF+  + LP+++TQFRKAVE +C IR+    P +L P PS G  +  S    +PTL+QLG+    EK     + F GGE A L RV +Y WE D LR YKETRNG+LG  +S+KFSPWLA G LSP+ I  E+++YE++R+ANDSTYW++FEL+WRD+F + ++KNGNSIFHLGGPR    +  W  D    E+W+ G TGYP IDANM+EL  +GFMSNRGRQ+V SF  +D+G+DWR+GAE FE  LLD+DPASN+GNW Y AGVG+DPREDRYF+I KQAKTYDPEGEY+ +WLPEL ALP                   +   N P + Y   +VPLKF 
Sbjct:  136 AFRAQFLIESLADLKKNLMKHGLDLLVRHGKPEDILPSVAKALGAH----TVYAQKESCSEELLVEELVRRGLHQVVIHEGESSKQKSVNPKLQLIWGSTMYHIDDLPFEAKN-LPDVYTQFRKAVESKCSIRSCFKLPASLGPLPS-GSLDEISGQGTIPTLEQLGYN---EKKFERGMHFVGGENAALGRVHEYFWENDMLRVYKETRNGMLGPDYSTKFSPWLASGSLSPRYIYEEVKRYEKQRLANDSTYWVLFELIWRDYFRFLSIKNGNSIFHLGGPRKVMSK--WSQDQSLFESWRDGRTGYPLIDANMKELCTTGFMSNRGRQIVCSFLVRDMGIDWRMGAEWFETCLLDYDPASNYGNWTYGAGVGNDPREDRYFSIPKQAKTYDPEGEYVAYWLPELRALP-------------------KDRRNFPGQSYIKQVVPLKFE 556          
BLAST of mRNA_H-elongata_contig15370.3543.1 vs. uniprot
Match: W7TQV2_9STRA (Cryptochrome DASH n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TQV2_9STRA)

HSP 1 Score: 454 bits (1167), Expect = 8.950e-151
Identity = 228/454 (50.22%), Postives = 303/454 (66.74%), Query Frame = 0
Query:    5 RCRFLLESVADLQSRLRVQGSDLIVRCGYPEDVIPDLATKLGGQATGTTLYTHTDVCSDEICVDNAVKRALTALTGPPVAVKEIWGNTMHHLDDLPF-DFPHALPNIFTQFRKAVEQRCQIRTPVSAPGTLRPFP--SCGDGNAASIITEVPTLKQLGFEPAPEK------------DEMAVLLFKGGETAGLKRVRQYIWEEDRLRSYKETRNGLLGSGFSSKFSPWLALGCLSPKTIVSEIRKYERERIANDSTYWLIFELLWRDFFCYSAVKNGNSIFHLGGPRHDAKRQVWRDDAGSLEAWKTGETGYPFIDANMRELKASGFMSNRGRQVVASFFTKDLGMDWRLGAEHFEEHLLDHDPASNWGNWNYVAGVGSDPREDRYFNIEKQAKTYDPEGEYIRHWLPELAALPTTALQARRILSPGGITTMLRHLHNLPVRIYPDPIVPLKFS 443
            R RFLLE+V DL++RL   G ++IV+ G PE  +P LA  L        +Y H +V S+E+ V   VK  L+  T      +E+WGN ++H+DD+PF +    +P+IFTQFRKAVE + ++R  +  P +L+P P  S  + N  ++++ + TL+ LGF    +             D  +VL+FKGGETAGL R+++Y W++D L+ YKETRNG+LG  +SSKFSPWLA G +SP+ I +EIRKYERER+ NDSTYWL FEL+WRDFF +SA+  GN+ F LGGP+ + ++  W+ D     AWK G TGYP +DANMRELK +GFMSNRGRQ+VASF T+D+G++WRLGA  FEE LLD+DP SN+GNW Y AGVGSDPREDRYF++ KQ  TYDPE  YI+HW PEL  +P   L     L+P      +R    +   +YP  IVPLKF 
Sbjct:  143 RARFLLEAVEDLKTRL---GGNMIVKLGKPETEVPRLAKALKVDF----VYAHREVTSEEVAVVKGVKEGLSKATEGKSQFRELWGNYLYHIDDVPFQNLKQDMPSIFTQFRKAVESKARVRKYLPKPPSLKPAPPRSTVEENTNALLSPL-TLEALGFTREEDLGPVLSYASDTRVDPSSVLMFKGGETAGLARLQEYFWDKDLLQKYKETRNGMLGPDYSSKFSPWLATGSISPRVIFAEIRKYERERVENDSTYWLFFELIWRDFFRFSAISFGNAFFKLGGPQGNPRKYPWKRDGALYHAWKEGLTGYPLVDANMRELKTTGFMSNRGRQLVASFLTRDMGLEWRLGAYWFEEVLLDYDPCSNYGNWCYAAGVGSDPREDRYFSLPKQGATYDPEARYIKHWCPELRHIPADIL-----LNPARFDGPVRAKFAVGEEVYPRQIVPLKFG 583          
BLAST of mRNA_H-elongata_contig15370.3543.1 vs. uniprot
Match: A0A6I9RLI6_ELAGV (Cryptochrome DASH n=3 Tax=Elaeis guineensis var. tenera TaxID=51953 RepID=A0A6I9RLI6_ELAGV)

HSP 1 Score: 449 bits (1154), Expect = 1.640e-149
Identity = 230/451 (51.00%), Postives = 298/451 (66.08%), Query Frame = 0
Query:    3 ASRCRFLLESVADLQSRLRVQGSDLIVRCGYPEDVIPDLATKLGGQATGTTLYTHTDVCSDEICVDNAVKRALTALT---GPPVAVKE-------IWGNTMHHLDDLPFDFPHALPNIFTQFRKAVEQRCQIRTPVSAPGTLRPFPSCGDGNAASIITEVPTLKQLGFEPAPEKDEMAVLLFKGGETAGLKRVRQYIWEEDRLRSYKETRNGLLGSGFSSKFSPWLALGCLSPKTIVSEIRKYERERIANDSTYWLIFELLWRDFFCYSAVKNGNSIFHLGGPRHDAKRQVWRDDAGSLEAWKTGETGYPFIDANMRELKASGFMSNRGRQVVASFFTKDLGMDWRLGAEHFEEHLLDHDPASNWGNWNYVAGVGSDPREDRYFNIEKQAKTYDPEGEYIRHWLPELAALPTTALQARRILSPGGITTMLRHLHNLPVRIYPDPIVPLKFS 443
            A R +FL+ES+ADL+  L   G DL+VR G PED++P +A  LG      T+Y   + CS+E+ V+  V+R L  +    G     K        IWG+TM+H+DDLPF+  + LP+++TQFRKAVE +C IR+    P +L P PS G  +  S    +PTL+QLG+    EK     + F GGE A L RV +Y WE D LR YKETRNG+LG  +S+KFSPWLA G LSP+ I  E+++YE++R+ANDSTYW++FEL+WRD+F + ++KNGNSIFHLG PR    +  W  D    E+W+ G TGYP IDANM+EL  +GFMSNRGRQ+V SF  +D+G+DWR+GAE FE  LLD+DPASN+GNW Y AGVG+DPREDRYF+I KQAKTYDPEGEY+ +WLPEL ALP                   +   N P + Y   +VPLKF 
Sbjct:  136 AFRAQFLIESLADLKKNLMKHGLDLLVRHGKPEDILPSVAKALGAH----TVYAQKESCSEELLVEELVRRGLHQVVIHEGESSKQKSVNPKLQLIWGSTMYHIDDLPFEAKN-LPDVYTQFRKAVESKCSIRSCFKLPASLGPLPS-GSLDEISGQGTIPTLEQLGYN---EKKFERGMHFVGGENAALGRVHEYFWENDMLRVYKETRNGMLGPDYSTKFSPWLASGSLSPRYIYEEVKRYEKQRLANDSTYWVLFELIWRDYFRFLSIKNGNSIFHLG-PRKVMSK--WSQDQSLFESWRDGRTGYPLIDANMKELCTTGFMSNRGRQIVCSFLVRDMGIDWRMGAEWFETCLLDYDPASNYGNWTYGAGVGNDPREDRYFSIPKQAKTYDPEGEYVAYWLPELRALP-------------------KDRRNFPGQSYIKQVVPLKFE 555          
BLAST of mRNA_H-elongata_contig15370.3543.1 vs. uniprot
Match: UPI0019E3F893 (DASH family cryptochrome n=1 Tax=Synechococcales cyanobacterium C42_A2020_086 TaxID=2774344 RepID=UPI0019E3F893)

HSP 1 Score: 445 bits (1145), Expect = 1.930e-149
Identity = 225/442 (50.90%), Postives = 301/442 (68.10%), Query Frame = 0
Query:    3 ASRCRFLLESVADLQSRLRVQGSDLIVRCGYPEDVIPDLATKLGGQATGTTLYTHTDVCSDEICVDNAVKRALTALTGPPVAVKEIWGNTMHHLDDLPFDFPHALPNIFTQFRKAVEQRCQIRTPVSAPGTLRPFPSCGDGNAASIITEVPTLKQLGFEPAPEKDEMAVLLFKGGETAGLKRVRQYIWEEDRLRSYKETRNGLLGSGFSSKFSPWLALGCLSPKTIVSEIRKYERERIANDSTYWLIFELLWRDFFCYSAVKNGNSIFHLGGPRHDAKRQVWRDDAGSLEAWKTGETGYPFIDANMRELKASGFMSNRGRQVVASFFTKDLGMDWRLGAEHFEEHLLDHDPASNWGNWNYVAGVGSDPREDRYFNIEKQAKTYDPEGEYIRHWLPELAALPTTALQARRILSPGGITTMLRHLHNLPVRI-YPDPIVPLKFS 443
            A R +FLLES+ADL+  LR  GSDLIVR G PE +IP+L      Q   + ++ H +V ++E  V+ A+K+AL A T P   +K+ WG+T++H DDLPFD   ++P +FT FRK VE++  +   +  P  L+  P   D      + E+P++  LG EP P  D  AVL F+GGE+AGL R++ YIWE+D LR YKETRNG+LG+ +SSKFSPWLALGCLSP+ I  ++ +YE ER+ NDSTYWLIFELLWRD+F +   K+GN +FH  G +       W+ D    + W+ G+TGYP +DANMREL A+GF+SNRGRQ VASF TK+LG+DWR+GAE FE  L+D+D  SNWGNWNY AGVG+D R  R+FNI KQAK YDP+G+Y++HWLPELA +P +     +I  P  +T   +  H + + + YP P+V L  S
Sbjct:   54 AFRAQFLLESLADLRRSLRELGSDLIVRSGKPEQIIPNLVQ----QWQISAVHYHQEVTAEEQRVEQALKKALAAQTIP---LKQFWGHTLYHPDDLPFD-QRSIPELFTAFRKQVEKQASVNPTLPGPRRLQALPEGID------VGEIPSVSDLGLEPVPP-DPRAVLPFQGGESAGLARLKHYIWEQDHLRRYKETRNGMLGANYSSKFSPWLALGCLSPRYIYEQVLQYEEERVRNDSTYWLIFELLWRDYFRFICQKHGNKVFHPSGLQ--GIDIPWKQDWQRFDLWREGQTGYPLVDANMRELAATGFISNRGRQNVASFLTKNLGIDWRMGAEWFESLLIDYDVCSNWGNWNYTAGVGNDARGFRFFNITKQAKDYDPQGKYVKHWLPELANVPIS-----KIHEPWRLTAEEQKRHQVRLGVDYPHPVVDLFIS 473          
BLAST of mRNA_H-elongata_contig15370.3543.1 vs. uniprot
Match: A0A6I5PL83_9CYAN (Cryptochrome DASH n=1 Tax=Leptolyngbya sp. SIOISBB TaxID=2607771 RepID=A0A6I5PL83_9CYAN)

HSP 1 Score: 443 bits (1140), Expect = 1.140e-148
Identity = 234/441 (53.06%), Postives = 304/441 (68.93%), Query Frame = 0
Query:    5 RCRFLLESVADLQSRLRVQGSDLIVRCGYPEDVIPDLATKLGGQATGTTLYTHTDVCSDEICVDNAVKRALTALTGPPVAVKEIWGNTMHHLDDLPFDFPHALPNIFTQFRKAVEQRCQIRTPVSAPGTLRPFPSCGDGNAASIIT-EVPTLKQLGFEPAPEKDEMAVLLFKGGETAGLKRVRQYIWEEDRLRSYKETRNGLLGSGFSSKFSPWLALGCLSPKTIVSEIRKYERERIANDSTYWLIFELLWRDFFCYSAVKNGNSIFHLGGPRHDAKRQVWRDDAGSLEAWKTGETGYPFIDANMRELKASGFMSNRGRQVVASFFTKDLGMDWRLGAEHFEEHLLDHDPASNWGNWNYVAGVGSDPREDRYFNIEKQAKTYDPEGEYIRHWLPELAALPTTALQARRILSPGGITTMLRHLHNLPVRI-YPDPIVPLKFS 443
            R +FLLESVADL+  L+ +GSDLI+R G PE VIP LA+++  QA    +Y H +  ++E+ V+NA+   L A TG  V  +  WG T++HLDDLPF  P  +P +FTQFRK VE+   +  P +AP  L   P        SI T  +PTL QLG E AP+ D+ AVL F GGETAGL R++ YIW+ D L+ YK+TRNG+LG+ +SSKFS WLALGCLSP+ +   ++ YE ER+ NDSTYWL+FELLWRD+F    +K+G+ +F+  G R D K   W+ D    EAW TG+TGYP +DANMREL A+GFMSNRGRQ VASF TK+LG+DWR+GAE FE  L+D+D  SNWGNWNY AGVG+D R  RYFNI KQ+K YDP+GEY++HWLPEL  LP     A ++  P  ++ + +   +L + + YP PIV L+ S
Sbjct:   54 RAQFLLESVADLRRSLQQRGSDLIIRWGEPETVIPALASEVNAQA----VYWHAEATAEELTVENALADKLQA-TGKKV--RTYWGATLYHLDDLPFS-PKKVPGVFTQFRKQVEKSSTVSEPFTAPKQLLTLPP-------SIKTGALPTLDQLGVE-APKFDDRAVLKFPGGETAGLTRLQAYIWDADCLKLYKQTRNGMLGANYSSKFSAWLALGCLSPRRVYQAVQAYEHERVRNDSTYWLMFELLWRDYFRLICLKHGDRVFYPSGLR-DLK-VAWQQDWPRFEAWCTGQTGYPLVDANMRELAATGFMSNRGRQNVASFLTKNLGIDWRMGAEWFESLLVDYDVCSNWGNWNYTAGVGNDARGFRYFNIPKQSKDYDPQGEYVKHWLPELQTLP-----ASKVHCPWQLSGLEQQQFSLRLGVDYPHPIVDLQKS 471          
BLAST of mRNA_H-elongata_contig15370.3543.1 vs. uniprot
Match: UPI00053C1400 (cryptochrome DASH, chloroplastic/mitochondrial n=1 Tax=Tarenaya hassleriana TaxID=28532 RepID=UPI00053C1400)

HSP 1 Score: 444 bits (1141), Expect = 9.260e-148
Identity = 221/442 (50.00%), Postives = 294/442 (66.52%), Query Frame = 0
Query:    3 ASRCRFLLESVADLQSRLRVQGSDLIVRCGYPEDVIPDLATKLGGQATGTTLYTHTDVCSDEICVDNAVKRALTALTGPP---VAVKEIWGNTMHHLDDLPFDFPHALPNIFTQFRKAVEQRCQIRTPVSAPGTLRPFPSCGDGNAASIITEVPTLKQLGFEPAPEKDEMAVLLFKGGETAGLKRVRQYIWEEDRLRSYKETRNGLLGSGFSSKFSPWLALGCLSPKTIVSEIRKYERERIANDSTYWLIFELLWRDFFCYSAVKNGNSIFHLGGPRHDAKRQVWRDDAGSLEAWKTGETGYPFIDANMRELKASGFMSNRGRQVVASFFTKDLGMDWRLGAEHFEEHLLDHDPASNWGNWNYVAGVGSDPREDRYFNIEKQAKTYDPEGEYIRHWLPELAALPTTALQARRILSPGGITTMLRHLHNLPVRIYPDPIVPLK 441
            A R  FL+E + DL+  L  +G +L++R G PED+IP LA   G      T++ H + CS+E+ V+  +++AL   +G P     ++ IWGNTM+H+DDLPF     LP+++TQFRK+VE +C +R+    P +L P PS  +        +VP L QL  +P   +  M    F GGETA L RV +Y W +D L+ YKETRNG+LG  +S+KFSPWLALGC+SP+ I  E+++YERERIAN+STYW++FEL+WRD+F + ++K GNS+FHLGGPR+   R  W  D    EAW+ G+TGYP IDANM+EL  +GFMSNRGRQ+V SF  +D+G+DWR+GAE FE  LLD+DP SN+GNW Y AGVG+DPREDRYF+I KQA+TYDPEGEY+  WLP+L  LP                   +   N P   Y D +VPLK
Sbjct:  124 ALRAAFLMECLDDLKKNLIKRGLNLLIRNGKPEDIIPSLAKDFGAH----TVFAHKETCSEELRVERLMQKALREASGRPENGAKLQLIWGNTMYHIDDLPFAAVD-LPDVYTQFRKSVEAKCSVRSCTRVPFSLGPTPSVDNWG------DVPILGQLDIQPQEVRKGMR---FVGGETAALGRVFEYFWNKDLLKVYKETRNGMLGPDYSTKFSPWLALGCISPRLIYEEVKRYERERIANNSTYWVLFELIWRDYFKFLSIKYGNSLFHLGGPRNVQGR--WSQDKKLFEAWRDGKTGYPLIDANMKELSTTGFMSNRGRQIVCSFLVRDMGLDWRMGAEWFETCLLDYDPCSNYGNWTYGAGVGNDPREDRYFSIPKQAQTYDPEGEYVAWWLPQLRRLP-------------------KEKRNSPGMSYIDRVVPLK 530          
BLAST of mRNA_H-elongata_contig15370.3543.1 vs. uniprot
Match: A0A2R6XUW8_MARPO (Cryptochrome DASH n=2 Tax=Marchantia polymorpha TaxID=3197 RepID=A0A2R6XUW8_MARPO)

HSP 1 Score: 443 bits (1139), Expect = 9.750e-148
Identity = 211/413 (51.09%), Postives = 286/413 (69.25%), Query Frame = 0
Query:    5 RCRFLLESVADLQSRLRVQGSDLIVRCGYPEDVIPDLATKLGGQATGTTLYTHTDVCSDEICVDNAVKRALTALTGPPVAVKE---------IWGNTMHHLDDLPFDFPHALPNIFTQFRKAVEQRCQIRTPVSAPGTLRPFPSCGD--GNAASIITEVPTLKQLGFEPAPEKDEMAVLLFKGGETAGLKRVRQYIWEEDRLRSYKETRNGLLGSGFSSKFSPWLALGCLSPKTIVSEIRKYERERIANDSTYWLIFELLWRDFFCYSAVKNGNSIFHLGGPRHDAKRQVWRDDAGSLEAWKTGETGYPFIDANMRELKASGFMSNRGRQVVASFFTKDLGMDWRLGAEHFEEHLLDHDPASNWGNWNYVAGVGSDPREDRYFNIEKQAKTYDPEGEYIRHWLPELAALPTTA 406
            R +F+LESVADL+  L+ +G DL++R G+PE+++P LA  +G      T++ H + CS+E  V+  +K  L  +  P     +         +WG T++H+DDLPF  P+ LP+++TQFRKA E   +IR     P  + P P   +  G    +    PTL  +G  P  E+    V+ F GGETA L R++ Y W +D++R+YKETRNG+LG+ +S+KFSPWLA GC++P+TI  E++KYE ER+AN STYW++FELLWRD+F + ++K GNSIFHLGGPR+  K + W  D    EAW+ G+TGYP IDANM+EL  +GFMSNRGRQ+V SF  +D+G+DWRLGAE FE  LLD+DP SN+GNW Y AGVG+DPREDRYF+I KQA+TYD +GEY+ HWLP+L  LP TA
Sbjct:  105 RAQFILESVADLRKNLQRRGLDLVIRVGHPEEIVPSLAEAVGAH----TVFGHKETCSEETTVEGRLKGRLAKVNVPSEVPGKSVRHPQLDLVWGGTLYHIDDLPFS-PNQLPDVYTQFRKACETNSRIRPACKMPHQMGPLPDSVEKIGGCGPL----PTLADVGLTPR-EQSPSGVMHFAGGETAALARLQDYFWVKDKVRAYKETRNGMLGADYSTKFSPWLAHGCITPRTIGEELKKYEGERVANQSTYWVLFELLWRDYFRFLSIKYGNSIFHLGGPRN-VKGKSWGQDKLLFEAWRDGKTGYPLIDANMKELAQTGFMSNRGRQIVCSFLVRDMGLDWRLGAEWFETCLLDYDPCSNYGNWTYGAGVGNDPREDRYFSIPKQAQTYDADGEYVAHWLPQLRHLPKTA 506          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig15370.3543.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FPZ3_ECTSI6.910e-23873.13Cryptochrome DASH n=2 Tax=Ectocarpus TaxID=2879 Re... [more]
D7FPZ4_ECTSI3.220e-22166.74Cryptochrome DASH n=1 Tax=Ectocarpus siliculosus T... [more]
A9U403_PHYPA1.130e-15550.33Cryptochrome DASH n=2 Tax=Physcomitrium patens Tax... [more]
A0A6I9RMC3_ELAGV3.270e-15251.22Cryptochrome DASH n=2 Tax=Arecaceae TaxID=4710 Rep... [more]
W7TQV2_9STRA8.950e-15150.22Cryptochrome DASH n=1 Tax=Nannochloropsis gaditana... [more]
A0A6I9RLI6_ELAGV1.640e-14951.00Cryptochrome DASH n=3 Tax=Elaeis guineensis var. t... [more]
UPI0019E3F8931.930e-14950.90DASH family cryptochrome n=1 Tax=Synechococcales c... [more]
A0A6I5PL83_9CYAN1.140e-14853.06Cryptochrome DASH n=1 Tax=Leptolyngbya sp. SIOISBB... [more]
UPI00053C14009.260e-14850.00cryptochrome DASH, chloroplastic/mitochondrial n=1... [more]
A0A2R6XUW8_MARPO9.750e-14851.09Cryptochrome DASH n=2 Tax=Marchantia polymorpha Ta... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002081Cryptochrome/DNA photolyase class 1PRINTSPR00147DNAPHOTLYASEcoord: 299..315
score: 58.09
coord: 319..337
score: 58.55
coord: 358..372
score: 38.33
NoneNo IPR availableGENE3D1.10.579.10coord: 276..447
e-value: 3.5E-64
score: 217.3
NoneNo IPR availableGENE3D1.25.40.80coord: 91..270
e-value: 1.6E-59
score: 202.8
NoneNo IPR availablePANTHERPTHR11455CRYPTOCHROMEcoord: 3..404
NoneNo IPR availablePANTHERPTHR11455:SF53CRYPTOCHROME DASH, CHLOROPLASTIC/MITOCHONDRIALcoord: 3..404
IPR014133Cryptochrome DASHTIGRFAMTIGR02765TIGR02765coord: 3..399
e-value: 2.6E-154
score: 512.2
IPR014729Rossmann-like alpha/beta/alpha sandwich foldGENE3D3.40.50.620coord: 1..90
e-value: 1.6E-20
score: 75.2
IPR006050DNA photolyase, N-terminalPFAMPF00875DNA_photolyasecoord: 2..129
e-value: 1.9E-19
score: 70.3
IPR006050DNA photolyase, N-terminalPROSITEPS51645PHR_CRY_ALPHA_BETAcoord: 1..93
score: 20.72
IPR005101Cryptochrome/DNA photolyase, FAD-binding domainPFAMPF03441FAD_binding_7coord: 250..441
e-value: 2.8E-56
score: 190.2
IPR036155Cryptochrome/photolyase, N-terminal domain superfamilySUPERFAMILY52425Cryptochrome/photolyase, N-terminal domaincoord: 2..178
IPR036134Cryptochrome/DNA photolyase, FAD-binding domain-like superfamilySUPERFAMILY48173Cryptochrome/photolyase FAD-binding domaincoord: 169..419

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig15370contigH-elongata_contig15370:287..6637 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig15370.3543.1mRNA_H-elongata_contig15370.3543.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig15370 287..6655 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig15370.3543.1 ID=prot_H-elongata_contig15370.3543.1|Name=mRNA_H-elongata_contig15370.3543.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=511bp
MSASRCRFLLESVADLQSRLRVQGSDLIVRCGYPEDVIPDLATKLGGQAT
GTTLYTHTDVCSDEICVDNAVKRALTALTGPPVAVKEIWGNTMHHLDDLP
FDFPHALPNIFTQFRKAVEQRCQIRTPVSAPGTLRPFPSCGDGNAASIIT
EVPTLKQLGFEPAPEKDEMAVLLFKGGETAGLKRVRQYIWEEDRLRSYKE
TRNGLLGSGFSSKFSPWLALGCLSPKTIVSEIRKYERERIANDSTYWLIF
ELLWRDFFCYSAVKNGNSIFHLGGPRHDAKRQVWRDDAGSLEAWKTGETG
YPFIDANMRELKASGFMSNRGRQVVASFFTKDLGMDWRLGAEHFEEHLLD
HDPASNWGNWNYVAGVGSDPREDRYFNIEKQAKTYDPEGEYIRHWLPELA
ALPTTALQARRILSPGGITTMLRHLHNLPVRIYPDPIVPLKFSTPWKGGK
GGGGGQRARGASGGRSSSRGSRGGGSGGGKGSRGGKGDSQSSEGTMRKFK
ASRLQRDGSL*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002081Cryptochrome/DNA_photolyase_1
IPR014133Cry_DASH
IPR014729Rossmann-like_a/b/a_fold
IPR006050DNA_photolyase_N
IPR005101Cryptochr/Photolyase_FAD-bd
IPR036155Crypto/Photolyase_N_sf
IPR036134Crypto/Photolyase_FAD-like_sf