prot_H-elongata_contig153446.3527.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig153446.3527.1
Unique Nameprot_H-elongata_contig153446.3527.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length90
Homology
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BLAST of mRNA_H-elongata_contig153446.3527.1 vs. uniprot
Match: A0A6H5K075_9PHAE (DUF4470 domain-containing protein (Fragment) n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K075_9PHAE)

HSP 1 Score: 128 bits (321), Expect = 1.850e-32
Identity = 55/90 (61.11%), Postives = 74/90 (82.22%), Query Frame = 0 
Query:    1 ASEFYVGVTEEDWRTSSVHDCATLLGVIPVGGIVPVVGHFHSMLEAARIAKTNEENDNVGDLGQRLRVAWKQACLVDRRAGAYVGSRVKI 90
            A+  Y  +T+EDW T+ V +CA LLGV+PV G+ P VGHFH+MLEAAR AKTN++N ++GDLGQRLR+AWKQ CL+D+RAGA+V S+ ++
Sbjct:  592 AAAAYAALTDEDWCTTKVQECALLLGVVPVSGVAPAVGHFHTMLEAARAAKTNKKNADIGDLGQRLRLAWKQLCLMDQRAGAFVASKDRV 681
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig153446.3527.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5K075_9PHAE1.850e-3261.11DUF4470 domain-containing protein (Fragment) n=2 T... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableTMHMMTMhelixcoord: 22..44

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig153446contigH-elongata_contig153446:66..741 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig153446.3527.1mRNA_H-elongata_contig153446.3527.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig153446 66..741 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig153446.3527.1 ID=prot_H-elongata_contig153446.3527.1|Name=mRNA_H-elongata_contig153446.3527.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=90bp
ASEFYVGVTEEDWRTSSVHDCATLLGVIPVGGIVPVVGHFHSMLEAARIA
KTNEENDNVGDLGQRLRVAWKQACLVDRRAGAYVGSRVKI
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