prot_H-elongata_contig15308.3506.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig15308.3506.1
Unique Nameprot_H-elongata_contig15308.3506.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length94
Homology
BLAST of mRNA_H-elongata_contig15308.3506.1 vs. uniprot
Match: D7FKR2_ECTSI (Glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase, C subunit n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FKR2_ECTSI)

HSP 1 Score: 111 bits (277), Expect = 3.710e-29
Identity = 55/93 (59.14%), Postives = 71/93 (76.34%), Query Frame = 0
Query:    1 MVRKTADLAQIQVTDDEASSPTLSLGEFIGFVETMEHIVSDSDGAFARLSTGDENFLREDTVNKFPNVGGVMDNMPVEEDNYLRVPRVGEDEG 93
            +VRKTA LAQIQV+D+E       + EF+GFVETM+ +   SDGAFA L+ G + FLRED+ ++F NV  +M+NMP+EE NYLRVP+VGEDEG
Sbjct:   72 LVRKTAMLAQIQVSDEEVDVLAPRMEEFLGFVETMKEVAEASDGAFATLNCGSD-FLREDSADRFSNVAAIMENMPIEEGNYLRVPKVGEDEG 163          
BLAST of mRNA_H-elongata_contig15308.3506.1 vs. uniprot
Match: A0A6H5KRS3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KRS3_9PHAE)

HSP 1 Score: 92.8 bits (229), Expect = 5.110e-23
Identity = 44/67 (65.67%), Postives = 53/67 (79.10%), Query Frame = 0
Query:   27 EFIGFVETMEHIVSDSDGAFARLSTGDENFLREDTVNKFPNVGGVMDNMPVEEDNYLRVPRVGEDEG 93
            EF+GFVETME +   SDGAFA L+ G + FLRED+  +F NV  VM+NMP+EE NYLRVP+VGEDEG
Sbjct:    3 EFLGFVETMEEVAEASDGAFATLNCGSD-FLREDSAERFSNVAAVMENMPIEEGNYLRVPKVGEDEG 68          
BLAST of mRNA_H-elongata_contig15308.3506.1 vs. uniprot
Match: A0A0G4EZ16_VITBC (Glutamyl-tRNA(Gln) amidotransferase subunit C, mitochondrial n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4EZ16_VITBC)

HSP 1 Score: 72.0 bits (175), Expect = 1.350e-13
Identity = 42/93 (45.16%), Postives = 55/93 (59.14%), Query Frame = 0
Query:    1 MVRKTADLAQIQVTDDEASSPTLSLGEFIGFVETMEHIVS---DSDGAFARLSTGDENFLREDTVNKFPNVGGVMDNMPVEEDNYLRVPRVGE 90
            +VRKTA LA + +TDDE S       +F+ FV+ M+ I +   D D    R S    + LREDTV  F N   ++ NMP EED +LR+PRVGE
Sbjct:   91 LVRKTAALAHLDLTDDEVSEMVHQFKDFLRFVDDMKAIDTSQLDIDVMSPRASVPYRDPLREDTVQPFDNREAIVANMPEEEDGFLRIPRVGE 183          
BLAST of mRNA_H-elongata_contig15308.3506.1 vs. uniprot
Match: A0A0G4IA18_9ALVE (Uncharacterized protein n=1 Tax=Chromera velia CCMP2878 TaxID=1169474 RepID=A0A0G4IA18_9ALVE)

HSP 1 Score: 63.5 bits (153), Expect = 2.060e-10
Identity = 34/92 (36.96%), Postives = 54/92 (58.70%), Query Frame = 0
Query:    1 MVRKTADLAQIQVTDDEASSPTLSLGEFIGFVETMEHIVSDSDGA--FARLSTGDENFLREDTVNKFPNVGGVMDNMPVEEDNYLRVPRVGE 90
            +++ TA LA + V+++E +     + +F+ FV+ M  +  D+ G     R      + LR DT N+F NVG + DNMP EED  L+VP++GE
Sbjct:   83 LLKNTAKLAGLSVSENEITDLIPEVSKFLKFVDQMNQVDVDAPGVQELPRADLPWSDPLRPDTPNRFNNVGAIWDNMPEEEDEMLKVPQLGE 174          
BLAST of mRNA_H-elongata_contig15308.3506.1 vs. uniprot
Match: R7QQW7_CHOCR (Glutamyl-tRNA(Gln) amidotransferase subunit C, mitochondrial n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QQW7_CHOCR)

HSP 1 Score: 56.6 bits (135), Expect = 1.150e-7
Identity = 32/88 (36.36%), Postives = 51/88 (57.95%), Query Frame = 0
Query:    2 VRKTADLAQIQVTDDEASSPTLSLGEFIGFVETMEHIVSDSDGAFARLSTGD-ENFLREDTVNKFPNVGGVMDNMPVEEDNYLRVPRV 88
            V++ A LAQ+ +++DE ++ T  L + IGF  ++  I  D +G     S  D  N LR+D    F NV  +MD +PV E  ++RVP++
Sbjct:  104 VKRIARLAQLNLSEDEITTMTPELQKVIGFFNSINEI--DVEGFEPMASPSDANNVLRDDVPVMFSNVDAIMDEVPVAEKEFIRVPKI 189          
BLAST of mRNA_H-elongata_contig15308.3506.1 vs. uniprot
Match: W7TR28_9STRA (Glutamyl-trna amidotransferase subunit c n=2 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TR28_9STRA)

HSP 1 Score: 53.9 bits (128), Expect = 6.010e-7
Identity = 28/92 (30.43%), Postives = 49/92 (53.26%), Query Frame = 0
Query:    1 MVRKTADLAQIQVTDDEASSPTLSLGEFIGFVETMEHIVSDSDGAFARLSTGDENFLREDTVNKFPNVGGVMDNMPVEEDNYLRVPRVGEDE 92
            +++ TA LAQ+   +DE  +       F+ FV+ M+ +   +  +        +  LR D+ + FPN   +  NM  +ED +LRVP+VGE++
Sbjct:   55 LIKHTATLAQLHFDEDEIQNMIPRFQAFLSFVDRMQDVPDSAAVSAPDSMPTVQEVLRPDSPSIFPNQDAIFTNMAEQEDAFLRVPKVGEED 146          
BLAST of mRNA_H-elongata_contig15308.3506.1 vs. uniprot
Match: A0A524JS51_9BACT (Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C n=1 Tax=Thermodesulfobacteriales bacterium TaxID=2528040 RepID=A0A524JS51_9BACT)

HSP 1 Score: 51.6 bits (122), Expect = 1.720e-6
Identity = 32/93 (34.41%), Postives = 54/93 (58.06%), Query Frame = 0
Query:    2 VRKTADLAQIQVTDDEASSPTLSLGEFIGFVETMEHIVSDSDGAFAR---LSTGDENFLREDTVNKFPNVGGVMDNMPVEEDNYLRVPRVGED 91
            V K A+LA+++VT++E +  T  LG  + ++E +  + +D+    +    +ST     LRED V K+ ++  V+ N P  EDN+  VP+V ED
Sbjct:    8 VTKVAELARLEVTEEETAIFTEQLGNILEYIEKLNELDTDNVEPTSHVLDISTP----LREDKVVKWLSIEEVLQNAPESEDNFFVVPQVIED 96          
BLAST of mRNA_H-elongata_contig15308.3506.1 vs. uniprot
Match: A0A1F6NJN1_9BACT (Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C n=2 Tax=Parcubacteria group TaxID=1794811 RepID=A0A1F6NJN1_9BACT)

HSP 1 Score: 51.2 bits (121), Expect = 3.070e-6
Identity = 35/100 (35.00%), Postives = 54/100 (54.00%), Query Frame = 0
Query:    2 VRKTADLAQIQVTDDEASSPTLSLGEFIGFVETMEHIVSDSDG--AFARLST---------GDENFLREDTVNKFPNVG--GVMDNMPVEEDNYLRVPRV 88
            V+K ADLA+I++TD EA   +  L + +GFVE +    +D  G  A ARL+T         G +N  RED + +  N    G++ N P ++D + +V  V
Sbjct:    7 VKKVADLARIEITDQEAEKYSKELSDILGFVEKLNEADTDKIGPIAPARLATQSVAGRHITGAKNATREDKIIEASNETKEGIIKNFPEKKDRFDKVKAV 106          
BLAST of mRNA_H-elongata_contig15308.3506.1 vs. uniprot
Match: A0A7S2ZNI6_9RHOD (Glutamyl-tRNA(Gln) amidotransferase subunit C, mitochondrial n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S2ZNI6_9RHOD)

HSP 1 Score: 50.8 bits (120), Expect = 6.540e-6
Identity = 31/89 (34.83%), Postives = 49/89 (55.06%), Query Frame = 0
Query:    1 MVRKTADLAQIQVTDDEASSPTLSLGEFIGFVETMEHIVSDSDGAFARLSTGDE-NFLREDTVNKFPNVGGVMDNMPVEEDNYLRVPRV 88
            +V KTA LA +Q++++E    T  L + IGFVE +  +  D  G    L   D  N LRED    FP    +++  P+ E +++RVP++
Sbjct:   37 LVEKTAKLASLQLSNEEVDRITPELQKIIGFVEQINAV--DVSGVEPTLRVEDLWNVLREDKPTIFPAQDEMLEEAPLLESDFIRVPKI 123          
BLAST of mRNA_H-elongata_contig15308.3506.1 vs. uniprot
Match: A0A1F6RYY8_9BACT (Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C n=1 Tax=Candidatus Moranbacteria bacterium RBG_13_45_13 TaxID=1801635 RepID=A0A1F6RYY8_9BACT)

HSP 1 Score: 47.8 bits (112), Expect = 5.300e-5
Identity = 28/89 (31.46%), Postives = 49/89 (55.06%), Query Frame = 0
Query:    2 VRKTADLAQIQVTDDEASSPTLSLGEFIGFVETMEHIVSDSDGAFARLSTGDENFLREDTVNKFPNV--GGVMDNMPVEEDNYLRVPRV 88
            V+K A+LA+I++TD+EA   +  L + +GFVE +    +      A + TG  N  RED +  +      G+++N P ++D + +V  V
Sbjct:    7 VQKIANLARIEITDEEAEKYSKELSDILGFVEKLNEADTVGIEPIAHI-TGARNVTREDRIIDYSEETKNGIINNFPEKKDRFDKVKTV 94          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig15308.3506.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 11
Match NameE-valueIdentityDescription
D7FKR2_ECTSI3.710e-2959.14Glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amido... [more]
A0A6H5KRS3_9PHAE5.110e-2365.67Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A0G4EZ16_VITBC1.350e-1345.16Glutamyl-tRNA(Gln) amidotransferase subunit C, mit... [more]
A0A0G4IA18_9ALVE2.060e-1036.96Uncharacterized protein n=1 Tax=Chromera velia CCM... [more]
R7QQW7_CHOCR1.150e-736.36Glutamyl-tRNA(Gln) amidotransferase subunit C, mit... [more]
W7TR28_9STRA6.010e-730.43Glutamyl-trna amidotransferase subunit c n=2 Tax=N... [more]
A0A524JS51_9BACT1.720e-634.41Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase s... [more]
A0A1F6NJN1_9BACT3.070e-635.00Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase s... [more]
A0A7S2ZNI6_9RHOD6.540e-634.83Glutamyl-tRNA(Gln) amidotransferase subunit C, mit... [more]
A0A1F6RYY8_9BACT5.300e-531.46Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase s... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036113Glu-tRNAGln amidotransferase superfamily, subunit CGENE3D1.10.20.60coord: 1..88
e-value: 8.1E-9
score: 37.4
IPR036113Glu-tRNAGln amidotransferase superfamily, subunit CSUPERFAMILY141000Glu-tRNAGln amidotransferase C subunitcoord: 2..88

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig15308contigH-elongata_contig15308:5698..6397 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig15308.3506.1mRNA_H-elongata_contig15308.3506.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig15308 5698..6397 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig15308.3506.1 ID=prot_H-elongata_contig15308.3506.1|Name=mRNA_H-elongata_contig15308.3506.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=94bp
MVRKTADLAQIQVTDDEASSPTLSLGEFIGFVETMEHIVSDSDGAFARLS
TGDENFLREDTVNKFPNVGGVMDNMPVEEDNYLRVPRVGEDEG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036113Asp/Glu-ADT_sf_sub_c