prot_H-elongata_contig15304.3505.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig15304.3505.1
Unique Nameprot_H-elongata_contig15304.3505.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length245
Homology
BLAST of mRNA_H-elongata_contig15304.3505.1 vs. uniprot
Match: A0A6H5L192_9PHAE (HOOK domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L192_9PHAE)

HSP 1 Score: 228 bits (581), Expect = 6.000e-65
Identity = 141/242 (58.26%), Postives = 169/242 (69.83%), Query Frame = 0
Query:    3 RARIEELSDLPAQLRREENAHAEVLDRCLSLETEVTQIPVIRRQLESYRRSKTEMEMANREQARALELSQEEVLRLSHEMQALEEGSGAVRSQHQELQEELTRRAMEDAERDGGGGGIGQG---------------------VSELNPALSEELARLRRQNGQLAAKLDYNTMETIEDLEHKAEDASRLADSFHANLASERELRAAAETSLADAHTCISDLEAEIATLREEHRATVTRLEAE 223
            R +IEELS LP QL+REE AHAEVLDRCL LETEVTQIP +RRQ+  YRRS+T+ME+A+REQ+R LE ++EE  RLS E++ L E   A R + + LQE  T R  E ++ +  GGGIG+G                     +SE NP L EE+ARLR  N QL AK+DYNT ETI DLE KA DASRLAD FH +LASERE+RAAAE SLA+A   I+DLE++I  LREEH ATVTRLE E
Sbjct:  428 REKIEELSGLPGQLKREEKAHAEVLDRCLRLETEVTQIPQLRRQVGQYRRSQTDMEVASREQSRELETAREESARLSQEVKDLRESYEAARGEQRRLQERWTARDTEGSDDEWAGGGIGEGGHGFLGAELLGGVFAGQAVVGISEFNPELMEEMARLRLANEQLKAKVDYNTEETILDLERKAGDASRLADKFHDSLASEREVRAAAELSLAEARARIADLESQIVALREEHLATVTRLEGE 669          
BLAST of mRNA_H-elongata_contig15304.3505.1 vs. uniprot
Match: A0A7S2U7B9_9STRA (Hypothetical protein (Fragment) n=2 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2U7B9_9STRA)

HSP 1 Score: 83.6 bits (205), Expect = 1.060e-14
Identity = 55/179 (30.73%), Postives = 103/179 (57.54%), Query Frame = 0
Query:    1 RCRARIEELSDLPAQLRREENAHAEVLDRCLSLETEVTQIPVIRRQLESYRRSKTEMEMA---NREQARALELSQEEVLRLSHEMQALEEGSGAVRSQHQELQEELTRRAMEDAERDG--GGGGIGQGVSELNPALSEELARLRRQNGQLAAKLDYNTMETIEDLEHKAEDASRLADSF 174
            +C+ ++EE++D    L REE AH+ ++ +CL LE E+T +  ++RQLE Y+    + E+      E  R L+  QE ++ ++ ++       GA    HQE+ +E+++R +E+A  +       +G+G+SELNP L EE+ RLR +N +          ++++ +E + +D +RL+D +
Sbjct:  180 KCKEKLEEMNDTKEALVREEEAHSALISKCLQLENELTALNPLKRQLEEYKTRAVDAEVKVTEYEEDIRTLKSRQETLVGMNEDLHL-----GA--KIHQEVNQEMSKRLVEEANSNPVENLSTVGEGMSELNPELMEEVQRLRNENARFKEFAAKRENDSVQKMEEQLDDKARLSDKY 351          
BLAST of mRNA_H-elongata_contig15304.3505.1 vs. uniprot
Match: A0A7S1ZBF5_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S1ZBF5_9STRA)

HSP 1 Score: 79.7 bits (195), Expect = 2.370e-13
Identity = 56/175 (32.00%), Postives = 97/175 (55.43%), Query Frame = 0
Query:    1 RCRARIEELSDLPAQLRREENAHAEVLDRCLSLETEVTQIPVIRRQLESYRRSKTEMEMANREQARALELSQEEVLRLSHEMQALEEGSGAV-RSQHQELQEELTRRAMEDAERDGGGGGIGQGVSELNPALSEELARLRRQNGQLAAKLDYNTMETIEDLEHKAEDASRLADSF 174
            +C+ ++  L D+  QL+REE AHA+ +D+CL+ E ++  +  ++RQL+  +    + E+   E    L  +     +   E++ L+EG+  + R+ HQ  +E L   A++D   D GG  IG G++ELNP L EEL RLR +N +L         ++++ LE   +D  +L+  F
Sbjct:  370 KCKDKLLSLLDIEQQLKREEEAHAKSVDQCLTYENQLNALKHVKRQLKQSQNRALDAEVKLSELQDELHKTINRTNQYEQEIKELKEGNQMMTRNIHQNFEEGL---ALQDQSNDYGG--IGDGMTELNPELKEELLRLRNENQRLKDFEQKRQQDSVQKLEESLDDTQKLSTKF 539          
BLAST of mRNA_H-elongata_contig15304.3505.1 vs. uniprot
Match: A0A836CAM2_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CAM2_9STRA)

HSP 1 Score: 79.0 bits (193), Expect = 4.260e-13
Identity = 79/285 (27.72%), Postives = 120/285 (42.11%), Query Frame = 0
Query:    1 RCRARIEELSDLPAQLRREENAHAE------------------------VLDRCLSLETEVTQIPVIRRQLESYRRSKTEMEMANREQARALELSQEEV------------------LRLSHEMQALEEGSGAVRSQHQELQEELTRRAMEDAERDGGGGG-----IGQGVSELNPALSE------------------------------------ELARLRRQNGQLAAKLDYNTMETIEDLEHKAEDASRLADSFHANLASERELRAAAETSLADAHTCISDL 202
            RCR R+EE  D+ AQL+RE                              VL RCL+ E E   +P +R+ LE  R++K E+E+ +RE    L  +                        L+     L+ GS A  ++   L++EL+  A+      G GGG     +G GVSELNPA++E                                    ELARLRR N QL ++ D+NT  T+ DLE + +DA RL+ ++   L   R   A  + +L+++   +++L
Sbjct:  166 RCRRRLEEAGDVQAQLKREXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVLARCLTAEAEAALVPGLRKSLEKARQAKAELELNDRELRAELAAAPAAAGSLXXXXXXXXXXXXXXXXXLAAVASQLKHGSAAAEAESHRLRDELSAAALHG----GSGGGEAAAALGGGVSELNPAITEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXELARLRRHNAQLLSEADHNTAATVADLEARLDDAERLSTAYAETLREARSAVAETQAALSESRQRVAEL 446          
BLAST of mRNA_H-elongata_contig15304.3505.1 vs. uniprot
Match: A0A4D9CTG0_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CTG0_9STRA)

HSP 1 Score: 75.9 bits (185), Expect = 4.830e-12
Identity = 74/234 (31.62%), Postives = 119/234 (50.85%), Query Frame = 0
Query:    1 RCRARIEELSDLPAQLRREENAHAEVLDRCLSLETEVTQIPVIRRQLESYRRSKTEMEMANRE-QARALELSQEEVLRLSHEMQALEEGSGAVRSQHQELQEELTRRAMEDAERDGGG----------GGIGQGVSELNPALSEELARLRRQNGQLAAKLDYNTMETIEDLEHKAEDASRLADSFHANLASERELRAAAETSLADAHTCISDLEAEIATLREEHRATVTRLEAE 223
            + R +++ L D+  +L+ E+ AH E L++CL LE E+ Q+PV++RQ+E+ +   TE E+  RE QA A E  QE   +   E  A              L++ L+  A+   E   GG          GG+G G++E NP +   +  L  +  +L A++    +E IE LE + +   RLA+SF      ER  +  A+ + A  H C+  L+   ATL+E+ + T T+  AE
Sbjct:  446 KARGKLQGLQDVRDRLQAEQAAHGEALEKCLQLERELQQVPVLKRQVEALKAGATENELLLRELQATAAE--QERTAKAQTEEIAT-------------LRQSLSMAALRSTEPATGGMLVVGEGQVGGGVGVGLTECNPDVVRNIRTLEAEVERLRAQISDTAVEKIEALEVEKDRHRRLAESFE-----ERYRKTVADLT-AQTH-CLEVLQEAHATLQEQFKMTKTKAAAE 657          
BLAST of mRNA_H-elongata_contig15304.3505.1 vs. uniprot
Match: A0A2D4C1F3_PYTIN (Uncharacterized protein (Fragment) n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4C1F3_PYTIN)

HSP 1 Score: 60.1 bits (144), Expect = 9.020e-7
Identity = 51/159 (32.08%), Postives = 80/159 (50.31%), Query Frame = 0
Query:   55 TEMEMANREQARALELSQEEVLRLSHEMQALEEGSGAVRSQHQELQEELTRRAMEDAERDGGGGGIGQGVSELNPALSEELARLRRQNGQLAAKLDYNTMETIEDLEHKAEDASRLADSFHANLASERELRAAAETSLADAHTCISDLEAEIATLREEH 213
            +E+E+   +QA+ LE    E   L+    ALEE +    S +Q LQ+ + +   ED      G  +  G+ ELNP LS++LARL  +N  L +++D  T E I+ L  + +D SRL  SF     S  +   A +  L ++     D+ A++  LR  H
Sbjct:    5 SELELQLSKQAQELETKTRECEALTS---ALEEAT----SMNQHLQQTVQQHVEEDKSLSSQGAHVADGIGELNPELSQKLARLEFENETLKSQIDGTTAERIDSLLDEIDDISRLKASFETKYFSTVDELQATQDRLRESQKHGEDVTADLKVLRAAH 156          
BLAST of mRNA_H-elongata_contig15304.3505.1 vs. uniprot
Match: A0A7S2KF11_9STRA (Hypothetical protein (Fragment) n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2KF11_9STRA)

HSP 1 Score: 57.0 bits (136), Expect = 1.020e-5
Identity = 45/150 (30.00%), Postives = 79/150 (52.67%), Query Frame = 0
Query:   27 LDRCLSLETEVTQIPVIRRQLESYRRSKTEMEMANREQARALELSQEEVLRLSHEMQALEEGSGAVRSQHQELQEELTRRAMEDAERDGGGG--GIGQGVSELNPALSEELARLRRQNGQLAAKLDYNTMETIEDLEHKAEDASRLADSF 174
            + + + LE E++ +  +RRQLE+Y+   T  E+   + +  L+                       R++ +ELQ+ L     E+ ++D G    G+G+GVSELNPA++EE+ RLR +N  L   +  +T + +E L    +D+ RL++SF
Sbjct:  383 VQQVIDLENELSSLAPLRRQLETYKARATAAEVKLTDVSDELQKXXXXXXXXXXXXXXXXXXXQFRRNEAEELQKML----KEETKKDLGNEILGLGEGVSELNPAVAEEITRLRNENSALKNFVARHTQDAVEQLGEDLDDSRRLSESF 528          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig15304.3505.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 7
Match NameE-valueIdentityDescription
A0A6H5L192_9PHAE6.000e-6558.26HOOK domain-containing protein n=2 Tax=Ectocarpus ... [more]
A0A7S2U7B9_9STRA1.060e-1430.73Hypothetical protein (Fragment) n=2 Tax=Attheya se... [more]
A0A7S1ZBF5_9STRA2.370e-1332.00Hypothetical protein n=1 Tax=Ditylum brightwellii ... [more]
A0A836CAM2_9STRA4.260e-1327.72Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A4D9CTG0_9STRA4.830e-1231.62Uncharacterized protein n=1 Tax=Nannochloropsis sa... [more]
A0A2D4C1F3_PYTIN9.020e-732.08Uncharacterized protein (Fragment) n=1 Tax=Pythium... [more]
A0A7S2KF11_9STRA1.020e-530.00Hypothetical protein (Fragment) n=1 Tax=Leptocylin... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 157..177
NoneNo IPR availableCOILSCoilCoilcoord: 192..219
NoneNo IPR availableCOILSCoilCoilcoord: 68..102
NoneNo IPR availableCOILSCoilCoilcoord: 128..148

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig15304contigH-elongata_contig15304:4943..6491 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig15304.3505.1mRNA_H-elongata_contig15304.3505.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig15304 4943..6491 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig15304.3505.1 ID=prot_H-elongata_contig15304.3505.1|Name=mRNA_H-elongata_contig15304.3505.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=245bp
RCRARIEELSDLPAQLRREENAHAEVLDRCLSLETEVTQIPVIRRQLESY
RRSKTEMEMANREQARALELSQEEVLRLSHEMQALEEGSGAVRSQHQELQ
EELTRRAMEDAERDGGGGGIGQGVSELNPALSEELARLRRQNGQLAAKLD
YNTMETIEDLEHKAEDASRLADSFHANLASERELRAAAETSLADAHTCIS
DLEAEIATLREEHRATVTRLEAEASAAAVAAADKLAASRKEAQEA
back to top