prot_H-elongata_contig15299.3501.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig15299.3501.1
Unique Nameprot_H-elongata_contig15299.3501.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length68
Homology
BLAST of mRNA_H-elongata_contig15299.3501.1 vs. uniprot
Match: A0A1X7VXK3_AMPQE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Amphimedon queenslandica TaxID=400682 RepID=A0A1X7VXK3_AMPQE)

HSP 1 Score: 57.8 bits (138), Expect = 1.270e-8
Identity = 28/66 (42.42%), Postives = 42/66 (63.64%), Query Frame = 0
Query:    1 MESPEWNDWRKAEETKMSGMVENSVYKQVAWTKDKLVVGTKMLYKRKVGQDGKVEKYKCRLVTQGF 66
            + S E + W++A E +M  +  N VY  V   K+K V+G+K +++RK+  DG VE+YK RLV Q F
Sbjct:   13 LSSSEADKWKEAMEREMESLKANDVYDLVELPKNKEVIGSKWIFRRKINADGSVERYKARLVAQRF 78          
BLAST of mRNA_H-elongata_contig15299.3501.1 vs. uniprot
Match: A0A1X7TFD5_AMPQE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Amphimedon queenslandica TaxID=400682 RepID=A0A1X7TFD5_AMPQE)

HSP 1 Score: 55.5 bits (132), Expect = 2.060e-8
Identity = 25/45 (55.56%), Postives = 35/45 (77.78%), Query Frame = 0
Query:   22 ENSVYKQVAWTKDKLVVGTKMLYKRKVGQDGKVEKYKCRLVTQGF 66
            EN V+  V   KD+ VVG+K ++KRK+G++GKVE+YK RLV QG+
Sbjct:   10 ENQVWDLVELPKDRRVVGSKWVFKRKIGENGKVERYKARLVAQGY 54          
BLAST of mRNA_H-elongata_contig15299.3501.1 vs. uniprot
Match: A0A0C2WN23_AMAMK (Integrase catalytic domain-containing protein (Fragment) n=1 Tax=Amanita muscaria (strain Koide BX008) TaxID=946122 RepID=A0A0C2WN23_AMAMK)

HSP 1 Score: 57.8 bits (138), Expect = 4.260e-8
Identity = 26/59 (44.07%), Postives = 41/59 (69.49%), Query Frame = 0
Query:    8 DWRKAEETKMSGMVENSVYKQVAWTKDKLVVGTKMLYKRKVGQDGKVEKYKCRLVTQGF 66
            +WRKA E ++    +  V+++V   +D+ ++G+K ++K K G DG+VEKYK RLV QGF
Sbjct: 1009 EWRKACEAELEMFKQLGVFEEVPRPRDRKIIGSKWVFKTKTGPDGQVEKYKARLVAQGF 1067          
BLAST of mRNA_H-elongata_contig15299.3501.1 vs. uniprot
Match: A0A075B0V5_ROZAC (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Rozella allomycis (strain CSF55) TaxID=988480 RepID=A0A075B0V5_ROZAC)

HSP 1 Score: 53.5 bits (127), Expect = 1.310e-6
Identity = 23/60 (38.33%), Postives = 39/60 (65.00%), Query Frame = 0
Query:    7 NDWRKAEETKMSGMVENSVYKQVAWTKDKLVVGTKMLYKRKVGQDGKVEKYKCRLVTQGF 66
            N+WRKA + + + ++ N  ++ +    D+  +G+K ++K K  + G+VEKYK RLV QGF
Sbjct:  112 NEWRKAMQAEYNALMSNGTWELMELPPDRKAIGSKWVFKTKYNERGEVEKYKARLVAQGF 171          
BLAST of mRNA_H-elongata_contig15299.3501.1 vs. uniprot
Match: UPI00092E9081 (uncharacterized protein LOC109363584 n=1 Tax=Lupinus angustifolius TaxID=3871 RepID=UPI00092E9081)

HSP 1 Score: 51.2 bits (121), Expect = 1.780e-6
Identity = 24/58 (41.38%), Postives = 38/58 (65.52%), Query Frame = 0
Query:    9 WRKAEETKMSGMVENSVYKQVAWTKDKLVVGTKMLYKRKVGQDGKVEKYKCRLVTQGF 66
            W++A +++M  M  N V+  V  +KD   +G   +YK+K+G+DGKVE YK  LV +G+
Sbjct:   65 WQEAIKSEMESMKTNKVWTLVEASKDIKPIGCMWVYKKKIGEDGKVETYKAHLVDKGY 122          
BLAST of mRNA_H-elongata_contig15299.3501.1 vs. uniprot
Match: UPI00092FCD17 (uncharacterized protein LOC109338179 n=1 Tax=Lupinus angustifolius TaxID=3871 RepID=UPI00092FCD17)

HSP 1 Score: 50.8 bits (120), Expect = 4.180e-6
Identity = 24/58 (41.38%), Postives = 37/58 (63.79%), Query Frame = 0
Query:    9 WRKAEETKMSGMVENSVYKQVAWTKDKLVVGTKMLYKRKVGQDGKVEKYKCRLVTQGF 66
            W++A E++M  M  N V+  V  +KD   +  K +Y + +G+DGKVE YK RLV +G+
Sbjct:   65 WQEATESEMESMKTNKVWTLVEASKDIKPIVCKWVYNKNIGEDGKVETYKARLVAKGY 122          
BLAST of mRNA_H-elongata_contig15299.3501.1 vs. uniprot
Match: A0A7D9H989_PARCT (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A7D9H989_PARCT)

HSP 1 Score: 48.9 bits (115), Expect = 5.230e-6
Identity = 22/60 (36.67%), Postives = 41/60 (68.33%), Query Frame = 0
Query:    7 NDWRKAEETKMSGMVENSVYKQVAWTKDKLVVGTKMLYKRKVGQDGKVEKYKCRLVTQGF 66
            N+W+ A +++ + ++ N+ ++ V   ++K V+G+K +YK K   DG VE++K RLV QG+
Sbjct:   16 NEWKNAMQSEYNSLLANNTWELVPPPENKNVIGSKWVYKVKRNADGSVERFKGRLVAQGY 75          
BLAST of mRNA_H-elongata_contig15299.3501.1 vs. uniprot
Match: A0A1X7U0V8_AMPQE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Amphimedon queenslandica TaxID=400682 RepID=A0A1X7U0V8_AMPQE)

HSP 1 Score: 51.6 bits (122), Expect = 5.320e-6
Identity = 22/58 (37.93%), Postives = 39/58 (67.24%), Query Frame = 0
Query:    9 WRKAEETKMSGMVENSVYKQVAWTKDKLVVGTKMLYKRKVGQDGKVEKYKCRLVTQGF 66
            W+KA + + + ++ N V++ V   KD+ VV +K ++K K+G  G +++YK RLV QG+
Sbjct:  172 WKKAMDEEYNSLMSNDVWELVKLPKDERVVSSKWIFKCKIGATGNIDRYKARLVAQGY 229          
BLAST of mRNA_H-elongata_contig15299.3501.1 vs. uniprot
Match: A0A2N5URY5_9BASI (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Puccinia coronata f. sp. avenae TaxID=200324 RepID=A0A2N5URY5_9BASI)

HSP 1 Score: 51.6 bits (122), Expect = 6.140e-6
Identity = 23/67 (34.33%), Postives = 39/67 (58.21%), Query Frame = 0
Query:    1 MESPEWNDWRKAEETKMSGMVENSVYKQVAWTKDKLVVGTKMLYKRKVGQDGKVEKYKCRLVTQGFW 67
            M   E + W+KAEE K++ M+ ++V++ +        + +   YK+K+G D +V KYK  +  QGFW
Sbjct:  197 MACDEQDQWKKAEEVKIANMISHNVWELIPLQPHHHTIPSTWAYKKKLGADNQVVKYKAHICAQGFW 263          
BLAST of mRNA_H-elongata_contig15299.3501.1 vs. uniprot
Match: A0A151T5R4_CAJCA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=2 Tax=Cajanus cajan TaxID=3821 RepID=A0A151T5R4_CAJCA)

HSP 1 Score: 51.6 bits (122), Expect = 6.380e-6
Identity = 24/58 (41.38%), Postives = 37/58 (63.79%), Query Frame = 0
Query:    9 WRKAEETKMSGMVENSVYKQVAWTKDKLVVGTKMLYKRKVGQDGKVEKYKCRLVTQGF 66
            WR A   +M+ + EN  +  V   K+K VVG + ++  K+G DGK+++YK RLV QG+
Sbjct:  864 WRAAVLEEMAALEENKTWDIVKLPKEKKVVGCRWIFTTKMGADGKIDRYKARLVAQGY 921          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig15299.3501.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A1X7VXK3_AMPQE1.270e-842.42Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A1X7TFD5_AMPQE2.060e-855.56Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A0C2WN23_AMAMK4.260e-844.07Integrase catalytic domain-containing protein (Fra... [more]
A0A075B0V5_ROZAC1.310e-638.33Reverse transcriptase Ty1/copia-type domain-contai... [more]
UPI00092E90811.780e-641.38uncharacterized protein LOC109363584 n=1 Tax=Lupin... [more]
UPI00092FCD174.180e-641.38uncharacterized protein LOC109338179 n=1 Tax=Lupin... [more]
A0A7D9H989_PARCT5.230e-636.67Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A1X7U0V8_AMPQE5.320e-637.93Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A2N5URY5_9BASI6.140e-634.33Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A151T5R4_CAJCA6.380e-641.38Retrovirus-related Pol polyprotein from transposon... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig15299contigH-elongata_contig15299:7135..7338 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig15299.3501.1mRNA_H-elongata_contig15299.3501.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig15299 7132..7635 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig15299.3501.1 ID=prot_H-elongata_contig15299.3501.1|Name=mRNA_H-elongata_contig15299.3501.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=68bp
MESPEWNDWRKAEETKMSGMVENSVYKQVAWTKDKLVVGTKMLYKRKVGQ
DGKVEKYKCRLVTQGFW*
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