prot_H-elongata_contig152618.3475.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig152618.3475.1
Unique Nameprot_H-elongata_contig152618.3475.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length169
Homology
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BLAST of mRNA_H-elongata_contig152618.3475.1 vs. uniprot
Match: D8LQE4_ECTSI (WW domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LQE4_ECTSI)

HSP 1 Score: 212 bits (540), Expect = 1.150e-60
Identity = 111/169 (65.68%), Postives = 128/169 (75.74%), Query Frame = 0 
Query:    1 RPPASLLRHESVMNILLEALFHPILRSPSEDVKTGSCAILAYASCVEVQPRSAAAGVAGEGKEGRSSGGGAKDKIDLVELAHTSHALMQAGNKCFDKRPSRLASLEGFLRPFAEHPIASLGILKWILAQVSTGAFCSTPSFLSYAPVFLKLCQQTVDEHPPQRPEVFEV 169
            RPPA L+RH ++M+ILLEALFHP  R PSED++ G CAILAYASCVEV P        G    G S GG A + IDLVELA TSHAL+QA  +CF+   S+LASL+G LRPFAEHP+ SLG+LKW+ AQ ST +F STPSFLSYAPVFLKLC Q  DEHPPQRPE FE+
Sbjct:  817 RPPAYLVRHPTLMDILLEALFHPAHRCPSEDLRAGCCAILAYASCVEVPPLDT--NNDGSSSNGGSLGGEAIEVIDLVELAETSHALLQAAGECFET--SQLASLQGRLRPFAEHPLVSLGVLKWVHAQASTESFVSTPSFLSYAPVFLKLCGQAADEHPPQRPEAFEI 981
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig152618.3475.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LQE4_ECTSI1.150e-6065.68WW domain-containing protein n=2 Tax=Ectocarpus Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006942TH1 proteinPFAMPF04858TH1coord: 2..168
e-value: 5.7E-8
score: 31.9
IPR006942TH1 proteinPANTHERPTHR12144TH1 PROTEIN-RELATEDcoord: 2..169

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig152618contigH-elongata_contig152618:237..1244 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig152618.3475.1mRNA_H-elongata_contig152618.3475.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig152618 237..1244 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig152618.3475.1 ID=prot_H-elongata_contig152618.3475.1|Name=mRNA_H-elongata_contig152618.3475.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=169bp
RPPASLLRHESVMNILLEALFHPILRSPSEDVKTGSCAILAYASCVEVQP
RSAAAGVAGEGKEGRSSGGGAKDKIDLVELAHTSHALMQAGNKCFDKRPS
RLASLEGFLRPFAEHPIASLGILKWILAQVSTGAFCSTPSFLSYAPVFLK
LCQQTVDEHPPQRPEVFEV
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006942TH1