prot_H-elongata_contig152604.3474.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig152604.3474.1
Unique Nameprot_H-elongata_contig152604.3474.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length81
Homology
BLAST of mRNA_H-elongata_contig152604.3474.1 vs. uniprot
Match: UPI001AD8DC38 (uncharacterized protein LOC121052952 isoform X1 n=1 Tax=Rosa chinensis TaxID=74649 RepID=UPI001AD8DC38)

HSP 1 Score: 56.6 bits (135), Expect = 1.750e-7
Identity = 32/80 (40.00%), Postives = 51/80 (63.75%), Query Frame = 0
Query:    1 WILDSGATGHLTHDGSRLSGYAE--CSRVLRGAGGEAFPIVGTGSLTLCVGSGGGVVRVKLNDVAHAPGLSHHLLSLRRI 78
            WI+DSGA+ H+T+D S  +  +    S+V   A GEAFP++GTGS+ L          ++L++V + P LSHHL+S+ ++
Sbjct:  353 WIIDSGASDHMTYDKSYFTHLSPPPVSKVTN-ANGEAFPVLGTGSVRL-------TPTLELHNVLYVPALSHHLISVPQL 424          
BLAST of mRNA_H-elongata_contig152604.3474.1 vs. uniprot
Match: A0A2P6SPF8_ROSCH (Uncharacterized protein n=1 Tax=Rosa chinensis TaxID=74649 RepID=A0A2P6SPF8_ROSCH)

HSP 1 Score: 53.5 bits (127), Expect = 7.990e-7
Identity = 30/79 (37.97%), Postives = 46/79 (58.23%), Query Frame = 0
Query:    1 WILDSGATGHLTHDGSRLSGYAECSRV-LRGAGGEAFPIVGTGSLTLCVGSGGGVVRVKLNDVAHAPGLSHHLLSLRRI 78
            WI+DSGAT H+T++ S +       R  +  A G+++PI G GS+TL          + L+ V   P LSH+LLS+++I
Sbjct:   63 WIIDSGATDHMTNNSSNIHHLTSVHRSGVTNANGDSYPITGAGSVTL-------TDSITLDTVLLVPSLSHNLLSVKQI 134          
BLAST of mRNA_H-elongata_contig152604.3474.1 vs. uniprot
Match: A0A2P6P2V5_ROSCH (Uncharacterized protein n=1 Tax=Rosa chinensis TaxID=74649 RepID=A0A2P6P2V5_ROSCH)

HSP 1 Score: 52.8 bits (125), Expect = 8.310e-7
Identity = 30/79 (37.97%), Postives = 46/79 (58.23%), Query Frame = 0
Query:    1 WILDSGATGHLTHDGSRLSGYAECSRV-LRGAGGEAFPIVGTGSLTLCVGSGGGVVRVKLNDVAHAPGLSHHLLSLRRI 78
            WI+DSGAT H+T++ S +       R  +  A G+++PI G GS+TL          + L+ V   P LSH+LLS+++I
Sbjct:   23 WIIDSGATDHMTNNPSNIHHLTPVRRSGVTNANGDSYPITGAGSVTL-------TKSITLDTVLLVPSLSHNLLSVKQI 94          
BLAST of mRNA_H-elongata_contig152604.3474.1 vs. uniprot
Match: A0A2Z7CQK4_9LAMI (Uncharacterized protein n=1 Tax=Dorcoceras hygrometricum TaxID=472368 RepID=A0A2Z7CQK4_9LAMI)

HSP 1 Score: 54.3 bits (129), Expect = 1.020e-6
Identity = 32/80 (40.00%), Postives = 45/80 (56.25%), Query Frame = 0
Query:    1 WILDSGATGHLTHDGSRLSGYAECS--RVLRGAGGEAFPIVGTGSLTLCVGSGGGVVRVKLNDVAHAPGLSHHLLSLRRI 78
            WI+DSGAT H+T      S YA C+  + +R A G   PI G GS+T+          + L+DV H P LS +LLS+ ++
Sbjct:  157 WIVDSGATDHMTGSYGLFSSYAPCAGNKKIRIADGSLSPIAGIGSITISK-------TLTLHDVLHVPNLSCNLLSVSKL 229          
BLAST of mRNA_H-elongata_contig152604.3474.1 vs. uniprot
Match: A0A2P6Q6A6_ROSCH (Putative RNA-directed DNA polymerase n=1 Tax=Rosa chinensis TaxID=74649 RepID=A0A2P6Q6A6_ROSCH)

HSP 1 Score: 54.3 bits (129), Expect = 1.190e-6
Identity = 29/79 (36.71%), Postives = 50/79 (63.29%), Query Frame = 0
Query:    1 WILDSGATGHLTHDGSRLSGYAE-CSRVLRGAGGEAFPIVGTGSLTLCVGSGGGVVRVKLNDVAHAPGLSHHLLSLRRI 78
            WI+DSGA+ H+T+D S  +  +      +  A GEAFP++G+GS+  C+        ++L++V + P LSHHL+S+ ++
Sbjct:   14 WIIDSGASDHMTYDKSYFTDLSSPLVSYVTNANGEAFPVLGSGSV--CI-----TPTLELHNVLYVPDLSHHLISVPQL 85          
BLAST of mRNA_H-elongata_contig152604.3474.1 vs. uniprot
Match: A0A2P6R6I2_ROSCH (Putative RNA-directed DNA polymerase n=3 Tax=Rosa chinensis TaxID=74649 RepID=A0A2P6R6I2_ROSCH)

HSP 1 Score: 54.3 bits (129), Expect = 1.200e-6
Identity = 28/79 (35.44%), Postives = 49/79 (62.03%), Query Frame = 0
Query:    1 WILDSGATGHLTHDGSRLSGYAECS-RVLRGAGGEAFPIVGTGSLTLCVGSGGGVVRVKLNDVAHAPGLSHHLLSLRRI 78
            WI+DSGA+ H+T+D +  +  +      +  A GEAFP++GTGS+ +          ++L++V + P LSHHL+S+ ++
Sbjct:  120 WIIDSGASDHMTYDKTYFTELSSPPVSYVTNANGEAFPVLGTGSIRI-------TPTLQLHNVLYVPDLSHHLISVPQL 191          
BLAST of mRNA_H-elongata_contig152604.3474.1 vs. uniprot
Match: A0A2P6PGT1_ROSCH (Putative RNA-directed DNA polymerase n=1 Tax=Rosa chinensis TaxID=74649 RepID=A0A2P6PGT1_ROSCH)

HSP 1 Score: 53.9 bits (128), Expect = 1.580e-6
Identity = 28/79 (35.44%), Postives = 49/79 (62.03%), Query Frame = 0
Query:    1 WILDSGATGHLTHDGSRLSGYAECS-RVLRGAGGEAFPIVGTGSLTLCVGSGGGVVRVKLNDVAHAPGLSHHLLSLRRI 78
            WI+DSGA+ H+T+D S  +  +      +  A GEAFP++G+GS+ +          ++L++V + P LSHHL+S+ ++
Sbjct:   52 WIIDSGASDHMTYDKSYFTDLSSPPVSYVTNANGEAFPVLGSGSVRI-------TPTLELHNVLYVPDLSHHLISVPQL 123          
BLAST of mRNA_H-elongata_contig152604.3474.1 vs. uniprot
Match: A0A5A7TRK9_CUCME (Beta-galactosidase n=1 Tax=Cucumis melo var. makuwa TaxID=1194695 RepID=A0A5A7TRK9_CUCME)

HSP 1 Score: 53.5 bits (127), Expect = 2.150e-6
Identity = 34/81 (41.98%), Postives = 41/81 (50.62%), Query Frame = 0
Query:    1 WILDSGATGHLTHDGSRLSGYAECS--RVLRGAGGEAFPIVGTGSLTLCVGSGGGVVRVKLNDVAHAPGLSHHLLSLRRIA 79
            WILDSGAT HLT        YA C+    +R A G   PI G G +    GS        L +V H P LS++LLS+  IA
Sbjct:  146 WILDSGATDHLTGSSEHFISYASCASNEKIRIADGSLAPIAGKGKIVPFDGSA-------LQNVLHVPKLSYNLLSISNIA 219          
BLAST of mRNA_H-elongata_contig152604.3474.1 vs. uniprot
Match: A0A2P6RT72_ROSCH (Putative RNA-directed DNA polymerase n=1 Tax=Rosa chinensis TaxID=74649 RepID=A0A2P6RT72_ROSCH)

HSP 1 Score: 53.5 bits (127), Expect = 2.230e-6
Identity = 28/79 (35.44%), Postives = 49/79 (62.03%), Query Frame = 0
Query:    1 WILDSGATGHLTHDGSRLSGYAECS-RVLRGAGGEAFPIVGTGSLTLCVGSGGGVVRVKLNDVAHAPGLSHHLLSLRRI 78
            WI+DSGA+ H+T+D S  +  +      +  A GEAFP++G+GS+ +          ++L++V + P LSHHL+S+ ++
Sbjct:   49 WIIDSGASDHMTYDKSYFTDLSSPPVSYVTNANGEAFPVLGSGSVRV-------TPTLELHNVLYVPDLSHHLISVPQL 120          
BLAST of mRNA_H-elongata_contig152604.3474.1 vs. uniprot
Match: A0A2P6R972_ROSCH (Putative RNA-directed DNA polymerase n=1 Tax=Rosa chinensis TaxID=74649 RepID=A0A2P6R972_ROSCH)

HSP 1 Score: 53.5 bits (127), Expect = 2.240e-6
Identity = 30/79 (37.97%), Postives = 46/79 (58.23%), Query Frame = 0
Query:    1 WILDSGATGHLTHDGSRLSGYAECSRV-LRGAGGEAFPIVGTGSLTLCVGSGGGVVRVKLNDVAHAPGLSHHLLSLRRI 78
            WI+DSGAT H+T++ S +       R  +  A G+++PI G GS+TL          + L+ V   P LSH+LLS+++I
Sbjct:   63 WIIDSGATDHMTNNSSNIHHLTSVHRSGVTNANGDSYPITGAGSVTL-------TDSITLDTVLLVPSLSHNLLSVKQI 134          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig152604.3474.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
UPI001AD8DC381.750e-740.00uncharacterized protein LOC121052952 isoform X1 n=... [more]
A0A2P6SPF8_ROSCH7.990e-737.97Uncharacterized protein n=1 Tax=Rosa chinensis Tax... [more]
A0A2P6P2V5_ROSCH8.310e-737.97Uncharacterized protein n=1 Tax=Rosa chinensis Tax... [more]
A0A2Z7CQK4_9LAMI1.020e-640.00Uncharacterized protein n=1 Tax=Dorcoceras hygrome... [more]
A0A2P6Q6A6_ROSCH1.190e-636.71Putative RNA-directed DNA polymerase n=1 Tax=Rosa ... [more]
A0A2P6R6I2_ROSCH1.200e-635.44Putative RNA-directed DNA polymerase n=3 Tax=Rosa ... [more]
A0A2P6PGT1_ROSCH1.580e-635.44Putative RNA-directed DNA polymerase n=1 Tax=Rosa ... [more]
A0A5A7TRK9_CUCME2.150e-641.98Beta-galactosidase n=1 Tax=Cucumis melo var. makuw... [more]
A0A2P6RT72_ROSCH2.230e-635.44Putative RNA-directed DNA polymerase n=1 Tax=Rosa ... [more]
A0A2P6R972_ROSCH2.240e-637.97Putative RNA-directed DNA polymerase n=1 Tax=Rosa ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig152604contigH-elongata_contig152604:1239..1481 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig152604.3474.1mRNA_H-elongata_contig152604.3474.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig152604 1239..1481 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig152604.3474.1 ID=prot_H-elongata_contig152604.3474.1|Name=mRNA_H-elongata_contig152604.3474.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=81bp
WILDSGATGHLTHDGSRLSGYAECSRVLRGAGGEAFPIVGTGSLTLCVGS
GGGVVRVKLNDVAHAPGLSHHLLSLRRIADA
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