prot_H-elongata_contig152515.3467.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig152515.3467.1
Unique Nameprot_H-elongata_contig152515.3467.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length139
Homology
BLAST of mRNA_H-elongata_contig152515.3467.1 vs. uniprot
Match: D7FYP5_ECTSI (ADF-H domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FYP5_ECTSI)

HSP 1 Score: 238 bits (608), Expect = 4.850e-79
Identity = 108/138 (78.26%), Postives = 126/138 (91.30%), Query Frame = 0
Query:    1 TGVTVNDTVVESFNAFKLHREPHNNRYFVYKIEDSTQVVIDTFGDKSKTYDDFVACLPPNECRYGVFDLDYITADGRQGNKIVFISWSPDTAKIRHKMVYAGSKEAIKSALVGIGIHLQATDQGEIELDHIKSQVIRV 138
            TGVTVND  VE FNAFKLHR PH+NRYF+YKIE+  ++++DTFGDK+KTYDDF ACLPPNECRYGVFDLD+ T DGR+ NK++FISWSPDTAKI++KMVYA SKEAIKSAL+GIGIHLQATDQGE+ELD+IKSQV +V
Sbjct:    3 TGVTVNDEAVEMFNAFKLHRAPHDNRYFIYKIENDAEIIVDTFGDKTKTYDDFTACLPPNECRYGVFDLDFTTRDGREANKLIFISWSPDTAKIKNKMVYAASKEAIKSALMGIGIHLQATDQGELELDYIKSQVQKV 140          
BLAST of mRNA_H-elongata_contig152515.3467.1 vs. uniprot
Match: A0A836CHD0_9STRA (ADF-H domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CHD0_9STRA)

HSP 1 Score: 181 bits (460), Expect = 1.770e-56
Identity = 86/139 (61.87%), Postives = 108/139 (77.70%), Query Frame = 0
Query:    1 TGVTVNDTVVESFNAFKLHREPHNNRYFVYKIEDSTQ-VVIDTFGDKSKTYDDFVACLPPNECRYGVFDLDYITADGRQGNKIVFISWSPDTAKIRHKMVYAGSKEAIKSALVGIGIHLQATDQGEIELDHIKSQVIRV 138
            TG+ VND VV  FN FKL +EP N RY+VYKI D+ Q +VIDTFG++  TYDDF + LPP ECRYG+FDLDY T DGR  +K+VFI+W+PD A +++KM+YAGSKE+IK ALVG+G+HLQA D  E+EL  I S V R+
Sbjct:    3 TGIIVNDEVVTQFNLFKLKKEPCNYRYYVYKISDNGQEIVIDTFGERDATYDDFCSKLPPKECRYGLFDLDYDTKDGRSSSKLVFIAWTPDEAAVKNKMMYAGSKESIKGALVGVGVHLQACDASELELATILSSVQRI 141          
BLAST of mRNA_H-elongata_contig152515.3467.1 vs. uniprot
Match: A0A836C9C2_9STRA (ADF-H domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C9C2_9STRA)

HSP 1 Score: 187 bits (475), Expect = 6.020e-56
Identity = 87/140 (62.14%), Postives = 114/140 (81.43%), Query Frame = 0
Query:    1 TGVTVNDTVVESFNAFKLHREPHNNRYFVYKIEDS-TQVVIDTFGDKSKTYDDFVACLPPNECRYGVFDLDYIT-ADGRQGNKIVFISWSPDTAKIRHKMVYAGSKEAIKSALVGIGIHLQATDQGEIELDHIKSQVIRV 138
            TGV+VND VV  FN FKL +EP N+R+++YKI D+  ++VID FG + KTYDDFVACLPPNECRYG+FDL+Y T  + R   K++ I+W+PDTAKI++KM+YAGSK+A+KSALVG+GIHLQATD  E+EL +I + V R+
Sbjct:  221 TGVSVNDAVVTQFNNFKLKKEPDNHRFYIYKISDNGAEIVIDQFGTREKTYDDFVACLPPNECRYGLFDLEYTTKTESRPVEKLILIAWTPDTAKIKNKMMYAGSKDALKSALVGVGIHLQATDASELELQYIINSVSRI 360          
BLAST of mRNA_H-elongata_contig152515.3467.1 vs. uniprot
Match: K0SV25_THAOC (ADF-H domain-containing protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0SV25_THAOC)

HSP 1 Score: 167 bits (422), Expect = 1.110e-50
Identity = 76/129 (58.91%), Postives = 103/129 (79.84%), Query Frame = 0
Query:    1 TGVTVNDTVVESFNAFKLHREPHNNRYFVYKIEDSTQVVIDTFGDKSKTYDDFVACLPPNECRYGVFDLDYITADGRQGNKIVFISWSPDTAKIRHKMVYAGSKEAIKSALVGIGIHLQATDQGEIELD 129
            TGV V+D V  SFN FKL +EP+  RYF+Y+I++  ++VI + GD+SKTY+DFV  LP N+CRYG+ D+++ T DGR  +KIVFISW+PDTA IR KM+Y+GSKEA+KSALVG+GIH+ ATD  E++ +
Sbjct:    3 TGVAVSDEVSTSFNKFKLGQEPYKLRYFIYEIKNKKEIVISSQGDRSKTYEDFVEELPENDCRYGLIDIEFETDDGRPTSKIVFISWNPDTASIRPKMLYSGSKEALKSALVGVGIHINATDHSELDFE 131          
BLAST of mRNA_H-elongata_contig152515.3467.1 vs. uniprot
Match: A0A7S1D6V8_CYCTE (Hypothetical protein n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1D6V8_CYCTE)

HSP 1 Score: 161 bits (407), Expect = 2.120e-48
Identity = 76/129 (58.91%), Postives = 97/129 (75.19%), Query Frame = 0
Query:    1 TGVTVNDTVVESFNAFKLHREPHNNRYFVYKIEDSTQVVIDTFGDKSKTYDDFVACLPPNECRYGVFDLDYITADGRQGNKIVFISWSPDTAKIRHKMVYAGSKEAIKSALVGIGIHLQATDQGEIELD 129
            TGV V D V  +FN FKL R     RYF+Y IE+   +VI+  G++SKTYDDFVA LP N+CRYG+ DL++ T DGR  +KIVFISW+PDTA +R KM+Y+GSKEAIKS L G+GIH+ ATD  E++L+
Sbjct:    3 TGVIVGDDVSFAFNEFKLQRGDFKLRYFIYSIENKKTIVIEKQGERSKTYDDFVADLPENDCRYGLIDLEFETDDGRPTSKIVFISWNPDTASVRPKMLYSGSKEAIKSVLTGVGIHINATDYSELDLE 131          
BLAST of mRNA_H-elongata_contig152515.3467.1 vs. uniprot
Match: B8C0E9_THAPS (The actin binding protein cofilin-like protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8C0E9_THAPS)

HSP 1 Score: 159 bits (403), Expect = 8.590e-48
Identity = 73/129 (56.59%), Postives = 100/129 (77.52%), Query Frame = 0
Query:    1 TGVTVNDTVVESFNAFKLHREPHNNRYFVYKIEDSTQVVIDTFGDKSKTYDDFVACLPPNECRYGVFDLDYITADGRQGNKIVFISWSPDTAKIRHKMVYAGSKEAIKSALVGIGIHLQATDQGEIELD 129
            TGV V+D V  SF  FKL +EP+  RYFVY+I++   +VI+  G+ SKTY+DFV  LP N+CRYG+ D+++ T DGR  +K+VFISW+PDTA +R KM+Y+GSKEA+KSALVG+GIH+ ATD  E++ +
Sbjct:    3 TGVAVDDEVSASFQKFKLGQEPYKLRYFVYEIKNKKTIVIEKQGELSKTYEDFVEELPENDCRYGLIDIEFETDDGRPTSKLVFISWNPDTASVRPKMLYSGSKEALKSALVGVGIHINATDHSELDFE 131          
BLAST of mRNA_H-elongata_contig152515.3467.1 vs. uniprot
Match: A0A6T5XBY3_9STRA (Hypothetical protein n=1 Tax=Thalassionema nitzschioides TaxID=33649 RepID=A0A6T5XBY3_9STRA)

HSP 1 Score: 159 bits (403), Expect = 8.590e-48
Identity = 73/129 (56.59%), Postives = 99/129 (76.74%), Query Frame = 0
Query:    1 TGVTVNDTVVESFNAFKLHREPHNNRYFVYKIEDSTQVVIDTFGDKSKTYDDFVACLPPNECRYGVFDLDYITADGRQGNKIVFISWSPDTAKIRHKMVYAGSKEAIKSALVGIGIHLQATDQGEIELD 129
            TGV  +D V E+F  FKL +EP   RYF+Y I+D  ++VI+  G++ KTYDDFV  LP N+CRYG+ DL++ + DGR  +K+VFI+W+PDTA IR KM+Y+GSKEAIKSALVG+GI + ATD  E++L+
Sbjct:    3 TGVRCHDDVAEAFTKFKLQQEPFKLRYFIYVIKDKKEIVIEKQGEREKTYDDFVENLPENDCRYGLLDLEFESDDGRPTSKLVFITWNPDTAPIRSKMLYSGSKEAIKSALVGVGIQINATDASELDLE 131          
BLAST of mRNA_H-elongata_contig152515.3467.1 vs. uniprot
Match: A0A067C057_SAPPC (ADF-H domain-containing protein n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067C057_SAPPC)

HSP 1 Score: 159 bits (403), Expect = 8.860e-48
Identity = 77/137 (56.20%), Postives = 101/137 (73.72%), Query Frame = 0
Query:    1 TGVTVNDTVVESFNAFKLHREPHNNRYFVYKIEDSTQVVIDTFGDKSKTYDDFVACL--PPNECRYGVFDLDYITADGRQGNKIVFISWSPDTAKIRHKMVYAGSKEAIKSALVGIGIHLQATDQGEIELDHIKSQV 135
            +GV V+D VV  FN FKL + P+N RYF+YKIE  +++VI+  G++S+TYDDF A L    NECRYG+ DLD+ T DGR  +K+VFISWSPDTA+++ KM+YA SKEAIK  LVG+GI+L ATD  E+    I+  V
Sbjct:    3 SGVGVSDDVVTEFNDFKLQKAPYNFRYFIYKIEGDSEIVIEHRGERSETYDDFAAKLNATTNECRYGLIDLDFTTKDGRPTSKLVFISWSPDTARVKSKMLYASSKEAIKRGLVGVGIYLSATDASELSFSSIQDGV 139          
BLAST of mRNA_H-elongata_contig152515.3467.1 vs. uniprot
Match: A0A1V9ZSG9_9STRA (Actin-depolymerizing factor n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9ZSG9_9STRA)

HSP 1 Score: 158 bits (400), Expect = 2.700e-47
Identity = 78/137 (56.93%), Postives = 103/137 (75.18%), Query Frame = 0
Query:    1 TGVTVNDTVVESFNAFKLHREPHNNRYFVYKIEDSTQVVIDTFGDKSKTYDDFVACLPP--NECRYGVFDLDYITADGRQGNKIVFISWSPDTAKIRHKMVYAGSKEAIKSALVGIGIHLQATDQGEIELDHIKSQV 135
            +GV V+D VV  FN FKL R P+N RYF+YKIE+S++VVI+  G++++TY+DF   L    +ECRYG+ DLD+ T DGR  +K+VFISWSPDTAKI+ KM+YA SKEAIK  LVG+GI+L ATD  E+ +  I+  V
Sbjct:    5 SGVGVHDDVVTEFNDFKLQRAPYNFRYFIYKIENSSEVVIEHRGERTETYEDFATKLKSIGDECRYGLIDLDFTTKDGRPTSKLVFISWSPDTAKIKSKMLYASSKEAIKRCLVGVGIYLSATDASELSMAAIEDGV 141          
BLAST of mRNA_H-elongata_contig152515.3467.1 vs. uniprot
Match: A0A7S0GMG6_9STRA (Hypothetical protein n=2 Tax=Sar TaxID=2698737 RepID=A0A7S0GMG6_9STRA)

HSP 1 Score: 156 bits (394), Expect = 2.070e-46
Identity = 70/137 (51.09%), Postives = 101/137 (73.72%), Query Frame = 0
Query:    1 TGVTVNDTVVESFNAFKLHREPHNNRYFVYKIEDSTQVVIDTFGDKSKTYDDFVACLPPNECRYGVFDLDYITADGRQGNKIVFISWSPDTAKIRHKMVYAGSKEAIKSALVGIGIHLQATDQGEIELDHIKSQVIR 137
            TGVT +  V  SF+ FKL + P + RYF+Y I+D   +++++ G + KTY+DF+A  P N+CRYG+ DLD+ T DGR  +K+VFISW+PDTA IR KM+++GSKEAIK+AL G+GIH+ ATD  E++++     V+R
Sbjct:    3 TGVTAHADVTTSFSQFKLQQAPFDIRYFIYTIKDKKTIIVESQGSRDKTYEDFMAAFPENDCRYGLIDLDFETVDGRPTSKLVFISWNPDTASIRPKMLFSGSKEAIKAALPGVGIHINATDFAELDMETSILPVVR 139          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig152515.3467.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FYP5_ECTSI4.850e-7978.26ADF-H domain-containing protein n=2 Tax=Ectocarpus... [more]
A0A836CHD0_9STRA1.770e-5661.87ADF-H domain-containing protein n=1 Tax=Tribonema ... [more]
A0A836C9C2_9STRA6.020e-5662.14ADF-H domain-containing protein n=1 Tax=Tribonema ... [more]
K0SV25_THAOC1.110e-5058.91ADF-H domain-containing protein n=1 Tax=Thalassios... [more]
A0A7S1D6V8_CYCTE2.120e-4858.91Hypothetical protein n=1 Tax=Cyclophora tenuis Tax... [more]
B8C0E9_THAPS8.590e-4856.59The actin binding protein cofilin-like protein n=1... [more]
A0A6T5XBY3_9STRA8.590e-4856.59Hypothetical protein n=1 Tax=Thalassionema nitzsch... [more]
A0A067C057_SAPPC8.860e-4856.20ADF-H domain-containing protein n=2 Tax=Saprolegni... [more]
A0A1V9ZSG9_9STRA2.700e-4756.93Actin-depolymerizing factor n=1 Tax=Achlya hypogyn... [more]
A0A7S0GMG6_9STRA2.070e-4651.09Hypothetical protein n=2 Tax=Sar TaxID=2698737 Rep... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002108Actin-depolymerising factor homology domainSMARTSM00102adf_2coord: 7..136
e-value: 1.5E-40
score: 150.7
IPR002108Actin-depolymerising factor homology domainPFAMPF00241Cofilin_ADFcoord: 10..133
e-value: 1.2E-35
score: 121.9
IPR002108Actin-depolymerising factor homology domainPROSITEPS51263ADF_Hcoord: 1..136
score: 34.316
IPR029006ADF-H/Gelsolin-like domain superfamilyGENE3D3.40.20.10coord: 1..137
e-value: 3.6E-43
score: 149.1
IPR017904ADF/CofilinPANTHERPTHR11913COFILIN-RELATEDcoord: 2..135
NoneNo IPR availablePANTHERPTHR11913:SF12COFILIN/ACTIN-DEPOLYMERIZING FACTOR HOMOLOGcoord: 2..135
NoneNo IPR availableSUPERFAMILY55753Actin depolymerizing proteinscoord: 1..135

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig152515contigH-elongata_contig152515:211..1128 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig152515.3467.1mRNA_H-elongata_contig152515.3467.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig152515 211..1128 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig152515.3467.1 ID=prot_H-elongata_contig152515.3467.1|Name=mRNA_H-elongata_contig152515.3467.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=139bp
TGVTVNDTVVESFNAFKLHREPHNNRYFVYKIEDSTQVVIDTFGDKSKTY
DDFVACLPPNECRYGVFDLDYITADGRQGNKIVFISWSPDTAKIRHKMVY
AGSKEAIKSALVGIGIHLQATDQGEIELDHIKSQVIRV*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002108ADF-H
IPR029006ADF-H/Gelsolin-like_dom_sf
IPR017904ADF/Cofilin