prot_H-elongata_contig1525.3466.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig1525.3466.1
Unique Nameprot_H-elongata_contig1525.3466.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length272
Homology
BLAST of mRNA_H-elongata_contig1525.3466.1 vs. uniprot
Match: D7FSY0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FSY0_ECTSI)

HSP 1 Score: 490 bits (1262), Expect = 6.800e-173
Identity = 234/272 (86.03%), Postives = 245/272 (90.07%), Query Frame = 0
Query:    1 MWPLAQAGSQGQQVGAHDAAVKTVRFIPELNLVASASWDRTVKFWDLRTSTPSAVVNLSERAYSMDTRGAMMVVATADRKICVYNLGSWS-NGPAPQTKTDSPLRYQTRCVSIFPDQQGFAVGSIEGRVGIEYFNEQAAKQAASSGYKPVGTYTQPKQGFAFKCHRLTGTQSAVYSVNSIAFHKYGTFATAGSDGNFHFWDKDSRQRLKAYDLKQGLPIPVCKFSPDGGLFGYALSYDWSQGVEHANPQKTNNIMVHVVQDDEIKPRPKDKK 271
            MW L Q G+ GQQ+G HDAAVKTVRFIPE+NLVASASWDRTVKFWD RTSTP+AVV L ERAYSMDT+GAMMVVATADRKICVYNLGSW+ NGPAPQT TDSPLRYQTRCVSIFPDQQGFAVGSIEGRVGIEYF+EQAAKQ A+SGYKP  TY   K  FAFKCHR+ G QS+VYSVNSIAFHKYGTFATAGSDGNFHFWDKDSRQRLKAYDLKQG  I VCKFSPDGGLFGYA+SYDWSQGVEHANPQ TNNI VH V DDEIKPRPKDKK
Sbjct:   95 MWSLGQPGTTGQQIGVHDAAVKTVRFIPEMNLVASASWDRTVKFWDTRTSTPAAVVTLCERAYSMDTKGAMMVVATADRKICVYNLGSWTTNGPAPQTMTDSPLRYQTRCVSIFPDQQGFAVGSIEGRVGIEYFSEQAAKQQAASGYKPATTYGNTKLSFAFKCHRVAGAQSSVYSVNSIAFHKYGTFATAGSDGNFHFWDKDSRQRLKAYDLKQGNTISVCKFSPDGGLFGYAMSYDWSQGVEHANPQATNNIFVHAVADDEIKPRPKDKK 366          
BLAST of mRNA_H-elongata_contig1525.3466.1 vs. uniprot
Match: A0A835ZCU3_9STRA (WD40-repeat-containing domain protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZCU3_9STRA)

HSP 1 Score: 285 bits (730), Expect = 4.180e-92
Identity = 144/274 (52.55%), Postives = 184/274 (67.15%), Query Frame = 0
Query:    2 WPLAQAGSQGQQVGAHDAAVKTVRFIPELNLVASASWDRTVKFWDLRTSTPSAVVNLSERAYSMDTRGAMMVVATADRKICVYNLGSWSNGPAPQTKTDSPLRYQTRCVSIFPDQQGFAVGSIEGRVGIEYFNEQAAKQAASSGYKPVGTYTQPKQGFAFKCHRLT----GTQSAVYSVNSIAFHKYGTFATAGSDGNFHFWDKDSRQRLKAYDLKQGLPIPVCKFSPDGGLFGYALSYDWSQGVEHANPQKTNNIMVHVVQDDEIKPRPKDKK 271
            W L  AG     +G HDA V+ + +IP ++L+A+ SWD+T++FWD++   P   + LSER Y ++ R   +VV TADRK  VYNLG+       ++  +S L+YQTRC +IFPDQ G+AVGSIEGRV IEYF+E   +    +G       +Q K+GFAFKCHR T     +Q+ V+S+NSIAFH YGTFATAGSDG F+FWDKDSRQRLK +  KQ   I    FSPDG L+ YA+SYDWSQGV  A P   + I +HVV DDEIKPR K +K
Sbjct:  102 WDLQGAGHPSMDIGKHDAPVRKMAWIPSMSLLATGSWDKTIRFWDMKQPNPVHTMTLSERVYDLEVRDNWLVVCTADRKNSVYNLGA---NCKLESVAESTLKYQTRCAAIFPDQTGYAVGSIEGRVAIEYFSELPNE----TGVPRALPASQTKRGFAFKCHRETLPQNKSQTGVFSINSIAFHPYGTFATAGSDGTFNFWDKDSRQRLKQFP-KQATTISTAAFSPDGSLYAYAVSYDWSQGVGGAQPGLPHEIKLHVVTDDEIKPRDKPRK 367          
BLAST of mRNA_H-elongata_contig1525.3466.1 vs. uniprot
Match: F0Y1R3_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y1R3_AURAN)

HSP 1 Score: 260 bits (665), Expect = 2.080e-82
Identity = 137/275 (49.82%), Postives = 172/275 (62.55%), Query Frame = 0
Query:    1 MWPLAQAGSQGQQVGAHDAAVKTVRFIPELNLVASASWDRTVKFWDLRTSTPSAVVNLSERAYSMDTRGAMMVVATADRKICVYNLGSWSNGPAPQTKTDSPLRYQTRCVSIFPDQQGFAVGSIEGRVGIEYFNEQAAKQAASSGYKPVGTYTQPKQGFAFKCHRLTGTQSA-------VYSVNSIAFHKYGTFATAGSDGNFHFWDKDSRQRLKAYDLKQGLPIPVCKFSPDGGLFGYALSYDWSQGVEHANPQKTNNIMVHVVQDDEIKPRPK 268
            MW L Q   Q Q  G HDA ++++ F+P L+ V + SWD+T+K WD+R  TP+A V L ER YSMD    +MVVATA+RK+CVY+L + +N   P    DSPL++QTRCV  FPD++GFA+GSIEGRV I + + + A +                  FAFKCHR T    A       +Y+VN IAFH  GTFATAGSDG F+FWDKDS+QRL A+  +   PI    FSP G L+ YALSYDWS+G E   P   N IM+H VQ DEI  R K
Sbjct:  100 MWTLGQP--QAQTFGKHDAPIRSIHFVPALSCVFTGSWDKTIKCWDVRQPTPTASVQLPERCYSMDVAHPLMVVATAERKLCVYDLSN-ANWQRPYRVEDSPLKHQTRCVRCFPDREGFAIGSIEGRVAIHHVDAKDAHK-----------------NFAFKCHRDTQDGRAGQASTCNIYAVNDIAFHNLGTFATAGSDGVFNFWDKDSKQRLMAFK-RADRPISCAAFSPAGTLYAYALSYDWSRGSESHTPTDPNTIMLHKVQKDEITQRNK 353          
BLAST of mRNA_H-elongata_contig1525.3466.1 vs. uniprot
Match: A0A8J2WTP8_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2WTP8_9STRA)

HSP 1 Score: 259 bits (662), Expect = 6.450e-82
Identity = 136/275 (49.45%), Postives = 172/275 (62.55%), Query Frame = 0
Query:    1 MWPLAQAGSQGQQVGAHDAAVKTVRFIPELNLVASASWDRTVKFWDLRTSTPSAVVNLSERAYSMDTRGAMMVVATADRKICVYNLGSWSNGPAPQTKTDSPLRYQTRCVSIFPDQQGFAVGSIEGRVGIEYFNEQAAKQAASSGYKPVGTYTQPKQGFAFKCHRLTGTQSA-------VYSVNSIAFHKYGTFATAGSDGNFHFWDKDSRQRLKAYDLKQGLPIPVCKFSPDGGLFGYALSYDWSQGVEHANPQKTNNIMVHVVQDDEIKPRPK 268
            MW L Q   Q QQVG HDA +K    + E N+V +  WD++V+ WD RT  P A + L ER Y+MD R  ++VV TA+RK+C+Y+L S +N   P    DSPLR+QTRCV+ FPD++GFA+GSIEGRVGI + + + A +                  FAFKCHR T    A       +Y+VNSIAFH  GTFATAGSDG +++WDKDS+QRL  +  K    I    FSP GGL+ YALSYDWS+G E  +PQ  N IM+H VQ DEI  R K
Sbjct:  103 MWRLGQP--QAQQVGKHDAPIKHCFHVAETNVVLTGGWDKSVRAWDCRTPNPVATIPLPERCYAMDVRHPLLVVGTAERKVCIYDLSS-ANWQQPYRVEDSPLRHQTRCVAAFPDREGFAIGSIEGRVGIHHVDPKNAHR-----------------NFAFKCHRETQDARAGQTGLCNIYAVNSIAFHHLGTFATAGSDGVYNYWDKDSKQRLMQFK-KAAQTISTACFSPSGGLYAYALSYDWSRGSESHSPQIPNQIMIHRVQKDEITQRNK 356          
BLAST of mRNA_H-elongata_contig1525.3466.1 vs. uniprot
Match: A0A7S4HJS6_9EUKA (Hypothetical protein n=1 Tax=Prymnesium polylepis TaxID=72548 RepID=A0A7S4HJS6_9EUKA)

HSP 1 Score: 251 bits (642), Expect = 4.130e-79
Identity = 136/274 (49.64%), Postives = 176/274 (64.23%), Query Frame = 0
Query:    1 MWPLAQAGSQGQQVGAHDAAVKTVRFIPELN--LVASASWDRTVKFWDLRTSTPSAVVNLSERAYSMDTRGAMMVVATADRKICVYNLGSWSNGPAPQTKTDSPLRYQTRCVSIFPDQQGFAVGSIEGRVGIEYFNEQAAKQAASSGYKPVGTYTQPKQGFAFKCHRLTGTQSAVYSVNSIAFHK-YGTFATAGSDGNFHFWDKDSRQRLKAYDLKQGLPIPVCKFSPDGGLFGYALSYDWSQGVEHANPQKTNNIMVHVVQDDEIKPRPKDKK 271
            +W LA   SQ  QV AHD  +K + ++ EL    + ++SWDRTVK+WD +T  PSA + L ERA+ MD R  ++VVATADRKI V NL   SN  A     DSPL+YQ+RCV+ FPDQQGF +GSIEGRV + +  E+   +                  FAFKCHR       +Y+VN I FH  +GTFAT GSDG ++FWDKDSRQRLKA++ K  + IPV  F+ DG +F YA+SYDWS+G EH NP +TN++++H V + EIK R   KK
Sbjct:   92 VWDLAT--SQATQVAAHDQPIKNISWVQELGGGCIVTSSWDRTVKYWDGKTPNPSATLQLPERAFCMDVRYPLLVVATADRKIIVVNL---SNPTAIFKAVDSPLKYQSRCVACFPDQQGFCLGSIEGRVAVHHVQERDVTK-----------------NFAFKCHR---ENQDIYAVNCITFHPTFGTFATTGSDGTYNFWDKDSRQRLKAFN-KASMAIPVGAFNRDGTIFAYAVSYDWSKGSEHYNP-RTNHLLLHSVPEAEIKSRATQKK 338          
BLAST of mRNA_H-elongata_contig1525.3466.1 vs. uniprot
Match: A0A7R9WN19_9STRA (Hypothetical protein n=1 Tax=Craspedostauros australis TaxID=1486917 RepID=A0A7R9WN19_9STRA)

HSP 1 Score: 248 bits (632), Expect = 6.960e-79
Identity = 127/271 (46.86%), Postives = 168/271 (61.99%), Query Frame = 0
Query:    1 MWPLAQAGSQG--QQVGAHDAAVKTVRFIPELNLVASASWDRTVKFWDLRTSTPSAVVNLSERAYSMDTRGAMMVVATADRKICVYNLGSWSNGPAPQTKTDSPLRYQTRCVSIFPDQQGFAVGSIEGRVGIEYFNEQAAKQAASSGYKPVGTYTQPKQGFAFKCHRLTGTQSAVYSVNSIAFH-KYGTFATAGSDGNFHFWDKDSRQRLKAYDLKQGLPIPVCKFSPDGGLFGYALSYDWSQGVEHANPQKTNNIMVHVVQDDEIKPRPK 268
            MW L Q+   G  QQ+GAHDA +K VR++P  NLV S  WDR +KFWD R+  P+ V+++ ER Y+MD R  ++VVATA R + +Y++      P    + +SPL+YQ+RCV+ FPD  G+AVGSIEGRVGI+Y  +                 T  +  FAFKCHR     S VYSVN+IAF  ++GTFAT G+DG  +FWDK++RQRLKA+       I   +F+  G LF YA SYDWS+G     P   N I +H   D+EIKP+PK
Sbjct:    2 MWQLGQSPPNGVAQQIGAHDAPIKGVRYLPNSNLVVSGGWDRKLKFWDTRSPNPAGVLDMPERIYAMDVRNTLLVVATAGRHLIMYDVSGAQ--PREHQRKESPLKYQSRCVTCFPDASGYAVGSIEGRVGIQYIQK-----------------TPNRDSFAFKCHRQ---DSGVYSVNAIAFQQRFGTFATVGADGVVNFWDKENRQRLKAF-AAINRTISCAEFNSPGNLFAYASSYDWSKGSSVYAPGTANEIYIHYTPDEEIKPKPK 249          
BLAST of mRNA_H-elongata_contig1525.3466.1 vs. uniprot
Match: A0A7R9XVW1_9VIRI (Hypothetical protein n=1 Tax=Prasinoderma coloniale TaxID=156133 RepID=A0A7R9XVW1_9VIRI)

HSP 1 Score: 251 bits (640), Expect = 7.790e-79
Identity = 131/271 (48.34%), Postives = 173/271 (63.84%), Query Frame = 0
Query:    1 MWPLAQAGSQGQQVGAHDAAVKTVRFIPELNLVASASWDRTVKFWDLRTSTPSAVVNLSERAYSMDTRGAMMVVATADRKICVYNLGSWSNGPAPQTKT-DSPLRYQTRCVSIFPDQQGFAVGSIEGRVGIEYFNEQAAKQAASSGYKPVGTYTQPKQGFAFKCHRLTGTQSAVYSVNSIAFHK-YGTFATAGSDGNFHFWDKDSRQRLKAYDLKQGLPIPVCKFSPDGGLFGYALSYDWSQGVEHANPQKT-NNIMVHVVQDDEIKPRPK 268
            +W +A   +  Q VG HDA + ++ +I EL L+A+ SWD+TVK+WD R+ TP+    L ER Y+MD R ++MVVATA+R IC+ NL +    P    KT  SPL+YQTRCVS FPDQ GF VGSIEGRV + +  +                 +Q  + F FKCHR     + VY+VNSIAFH  YGTFATAG+DG F+FWDKDS+QRLKA   +   PIP   F+ DG ++ YA+SYDWS+G +   PQ   N++++H  QD E+K R K
Sbjct:   96 LWSVASGATTAQVVGQHDAPICSMAWIEELKLLATGSWDKTVKYWDTRSPTPAHTQQLPERCYAMDVRQSLMVVATAERHICIINLKT----PQQIYKTIQSPLKYQTRCVSCFPDQTGFLVGSIEGRVAVHHVED-----------------SQQGRNFTFKCHR---DNADVYAVNSIAFHPTYGTFATAGADGAFNFWDKDSKQRLKAMP-RANAPIPCGTFNRDGSIYAYAVSYDWSKGAQGHQPQVAKNHVLLHATQDSEVKSRQK 341          
BLAST of mRNA_H-elongata_contig1525.3466.1 vs. uniprot
Match: UPI0010A475A9 (protein RAE1-like n=1 Tax=Prosopis alba TaxID=207710 RepID=UPI0010A475A9)

HSP 1 Score: 246 bits (629), Expect = 2.050e-78
Identity = 128/270 (47.41%), Postives = 167/270 (61.85%), Query Frame = 0
Query:    1 MWPLAQAGSQGQQVGAHDAAVKTVRFIPELNLVASASWDRTVKFWDLRTSTPSAVVNLSERAYSMDTRGAMMVVATADRKICVYNLGSWSNGPAPQTKTDSPLRYQTRCVSIFPDQQGFAVGSIEGRVGIEYFNEQAAKQAASSGYKPVGTYTQPKQGFAFKCHRLTGTQSAVYSVNSIAFHK-YGTFATAGSDGNFHFWDKDSRQRLKAYDLKQGLPIPVCKFSPDGGLFGYALSYDWSQGVEHANPQKTNN-IMVHVVQDDEIKPRPK 268
            MWPL  +G Q   V  HD  +K + +IPE+NL+A+ SWD+T+K+WD R S P     L +R Y+M  +  +MVV TADR + V+NL    N      +  SPLRYQTRCV+ FPDQQGF VGSIEGRVG+ + +E                  Q  + F FKCHR     + +YSVNS+ FH  + TFATAGSDG F+FWDKDS+QRLKA   +  LPIP   F+ DG +F YA+ YDWS+G E+ NP      I +H+ QD E+K +P+
Sbjct:    1 MWPLL-SGGQPVPVAMHDGPIKEIAWIPEMNLLATGSWDKTLKYWDARQSNPVHTQQLPDRCYAMTVKYPLMVVGTADRNLVVFNL---QNPQTEYKRIQSPLRYQTRCVAAFPDQQGFLVGSIEGRVGVHHLDE-----------------AQHNKNFTFKCHR---ENNEIYSVNSLNFHPVHHTFATAGSDGAFNFWDKDSKQRLKAMQ-RCSLPIPCSAFNNDGSIFAYAVCYDWSKGAENHNPAAAKTQIYLHLPQDAEVKAKPR 245          
BLAST of mRNA_H-elongata_contig1525.3466.1 vs. uniprot
Match: A0A7S3K4J4_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3K4J4_9STRA)

HSP 1 Score: 249 bits (635), Expect = 1.110e-77
Identity = 130/275 (47.27%), Postives = 169/275 (61.45%), Query Frame = 0
Query:    1 MWPLAQAGSQGQQVGAHDAAVKTVRFIPELNLVASASWDRTVKFWDLRTSTPSAVVNLSERAYSMDTRGAMMVVATADRKICVYNLGSWSNGPAPQTKTDSPLRYQTRCVSIFPDQQGFAVGSIEGRVGIEYFNEQAAKQAASSGYKPVGTYTQPKQGFAFKCHRLTG-------TQSAVYSVNSIAFHKYGTFATAGSDGNFHFWDKDSRQRLKAYDLKQGLPIPVCKFSPDGGLFGYALSYDWSQGVEHANPQKTNNIMVHVVQDDEIKPRPK 268
            MW L     Q   +G H+A +K+V  + E NL  +  WD  ++ WD RT TP+A + L ER Y+M     +MVV TA+RKI +Y+L S SN   P    +SPLR+QTRC++ FPD+ GFA+GSIEGRV I + N + A +                  FAFKCHR T        T   +Y+VNSI FHK+GTFATAGSDG ++FWDKDS+QRL A+       IP   FSP G L+ YALSYDWS+G E+ NPQ  N IM+H V+++EI+ R K
Sbjct:  113 MWNLQT--QQTSVIGRHEAPIKSVHCVREFNLAVTGGWDNAIRCWDARTPTPAATITLPERCYAMAVNHPLMVVGTAERKILMYDL-SRSNWQQPMRFEESPLRHQTRCIATFPDRDGFAIGSIEGRVAIHHVNIKEAGR-----------------NFAFKCHRDTQENRVGQPTVCNIYAVNSIVFHKFGTFATAGSDGVYNFWDKDSKQRLMAFKAAPNT-IPCASFSPIGNLYAYALSYDWSRGSENYNPQTPNYIMLHHVKEEEIRQRKK 366          
BLAST of mRNA_H-elongata_contig1525.3466.1 vs. uniprot
Match: A0A162B2F9_DAUCS (Uncharacterized protein n=1 Tax=Daucus carota subsp. sativus TaxID=79200 RepID=A0A162B2F9_DAUCS)

HSP 1 Score: 246 bits (628), Expect = 5.340e-77
Identity = 130/273 (47.62%), Postives = 174/273 (63.74%), Query Frame = 0
Query:    1 MWPLAQAGSQGQQVGAHDAAVKTVRFIPELNLVASASWDRTVKFWDLRTSTPSAVVNLSERAYSMDTRGAMMVVATADRKICVYNLGSWSNGPAPQT---KTDSPLRYQTRCVSIFPDQQGFAVGSIEGRVGIEYFNEQAAKQAASSGYKPVGTYTQPKQGFAFKCHRLTGTQSAVYSVNSIAFHK-YGTFATAGSDGNFHFWDKDSRQRLKAYDLKQGLPIPVCKFSPDGGLFGYALSYDWSQGVEHANPQKTNN-IMVHVVQDDEIKPRPK 268
            MW L+ +G Q   VG HDAAVK + +IPE+NL+ + SWD+T+++WDLR   P+ V  L ER Y++  R  +MVVATADR + VYNL +      PQT   +  SPL+YQTRCV+ FPDQQGF VGSIEGRVG+ + ++                 +Q  + F FKCHR     + +YSVN++ FH  + TFATAGSDG F+FWDKDS+QRLKA   K   PIP   F+ DG ++ YA+ YDWS+G E+ NP      I +H  Q+ E+K +P+
Sbjct:   94 MWQLS-SGGQPVTVGMHDAAVKDLAWIPEINLLVTGSWDKTLRYWDLRQPNPAHVQALPERCYALTVRHPLMVVATADRNLIVYNLQN------PQTEFKRISSPLKYQTRCVAAFPDQQGFLVGSIEGRVGVHHLDD-----------------SQQTKNFTFKCHR---DGNDIYSVNALNFHPVHHTFATAGSDGTFNFWDKDSKQRLKAMS-KCSNPIPCSAFNNDGSIYAYAVCYDWSKGAENHNPSTAKTCIYLHATQEAEVKAKPR 338          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig1525.3466.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FSY0_ECTSI6.800e-17386.03Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A835ZCU3_9STRA4.180e-9252.55WD40-repeat-containing domain protein n=1 Tax=Trib... [more]
F0Y1R3_AURAN2.080e-8249.82Uncharacterized protein n=1 Tax=Aureococcus anopha... [more]
A0A8J2WTP8_9STRA6.450e-8249.45Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
A0A7S4HJS6_9EUKA4.130e-7949.64Hypothetical protein n=1 Tax=Prymnesium polylepis ... [more]
A0A7R9WN19_9STRA6.960e-7946.86Hypothetical protein n=1 Tax=Craspedostauros austr... [more]
A0A7R9XVW1_9VIRI7.790e-7948.34Hypothetical protein n=1 Tax=Prasinoderma colonial... [more]
UPI0010A475A92.050e-7847.41protein RAE1-like n=1 Tax=Prosopis alba TaxID=2077... [more]
A0A7S3K4J4_9STRA1.110e-7747.27Hypothetical protein n=1 Tax=Aureoumbra lagunensis... [more]
A0A162B2F9_DAUCS5.340e-7747.62Uncharacterized protein n=1 Tax=Daucus carota subs... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001680WD40 repeatSMARTSM00320WD40_4coord: 7..46
e-value: 7.3E-6
score: 35.5
coord: 154..200
e-value: 0.0028
score: 26.9
IPR001680WD40 repeatPFAMPF00400WD40coord: 14..46
e-value: 1.3E-4
score: 22.7
coord: 164..200
e-value: 1.5E-4
score: 22.4
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 14..55
score: 14.485
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3D2.130.10.10coord: 1..269
e-value: 5.7E-73
score: 248.4
NoneNo IPR availablePANTHERPTHR10971MRNA EXPORT FACTOR AND BUB3coord: 1..268
IPR037631mRNA export factor Gle2/RAE1PANTHERPTHR10971:SF11MRNA EXPORT FACTORcoord: 1..268
IPR019775WD40 repeat, conserved sitePROSITEPS00678WD_REPEATS_1coord: 33..47
IPR017986WD40-repeat-containing domainPROSITEPS50294WD_REPEATS_REGIONcoord: 1..55
score: 14.213
IPR036322WD40-repeat-containing domain superfamilySUPERFAMILY50978WD40 repeat-likecoord: 12..233

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig1525contigH-elongata_contig1525:13135..16086 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig1525.3466.1mRNA_H-elongata_contig1525.3466.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig1525 11985..16095 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig1525.3466.1 ID=prot_H-elongata_contig1525.3466.1|Name=mRNA_H-elongata_contig1525.3466.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=272bp
MWPLAQAGSQGQQVGAHDAAVKTVRFIPELNLVASASWDRTVKFWDLRTS
TPSAVVNLSERAYSMDTRGAMMVVATADRKICVYNLGSWSNGPAPQTKTD
SPLRYQTRCVSIFPDQQGFAVGSIEGRVGIEYFNEQAAKQAASSGYKPVG
TYTQPKQGFAFKCHRLTGTQSAVYSVNSIAFHKYGTFATAGSDGNFHFWD
KDSRQRLKAYDLKQGLPIPVCKFSPDGGLFGYALSYDWSQGVEHANPQKT
NNIMVHVVQDDEIKPRPKDKK*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001680WD40_repeat
IPR015943WD40/YVTN_repeat-like_dom_sf
IPR037631Gle2/RAE1
IPR019775WD40_repeat_CS
IPR017986WD40_repeat_dom
IPR036322WD40_repeat_dom_sf