prot_H-elongata_contig152494.3465.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig152494.3465.1
Unique Nameprot_H-elongata_contig152494.3465.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length43
Homology
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BLAST of mRNA_H-elongata_contig152494.3465.1 vs. uniprot
Match: D8LS02_ECTSI (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LS02_ECTSI)

HSP 1 Score: 55.8 bits (133), Expect = 6.800e-8
Identity = 22/36 (61.11%), Postives = 29/36 (80.56%), Query Frame = 0 
Query:    1 MQHVIQGNRHARFYFPPGITRGPGMLVRRDFFDSVK 36
            M HV+QG+RHAR+YFP G+ RG G  +R D+FDS+K
Sbjct:  546 MHHVMQGDRHARYYFPTGVIRGQGNRLRIDYFDSIK 581
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig152494.3465.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LS02_ECTSI6.800e-861.11Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig152494contigH-elongata_contig152494:122..250 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig152494.3465.1mRNA_H-elongata_contig152494.3465.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig152494 113..250 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig152494.3465.1 ID=prot_H-elongata_contig152494.3465.1|Name=mRNA_H-elongata_contig152494.3465.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=43bp
MQHVIQGNRHARFYFPPGITRGPGMLVRRDFFDSVKQVAIIAS
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