prot_H-elongata_contig15198.3441.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig15198.3441.1
Unique Nameprot_H-elongata_contig15198.3441.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length138
Homology
BLAST of mRNA_H-elongata_contig15198.3441.1 vs. uniprot
Match: D7FVQ5_ECTSI (Histone H2A n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVQ5_ECTSI)

HSP 1 Score: 224 bits (571), Expect = 9.040e-73
Identity = 125/133 (93.98%), Postives = 127/133 (95.49%), Query Frame = 0
Query:    7 GKGKGGRGDKKSASKSSKAGLQFPVARIGRYLKRGKYASRVGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKARIIPRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKKSGPGKAKSSAS--QDY 137
            GKGKGGRG KKS SKSSKAGLQFPVARIGRYLKRGKYA+RVGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKARIIPRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKKS  GKAK+SAS  QDY
Sbjct:   54 GKGKGGRG-KKSTSKSSKAGLQFPVARIGRYLKRGKYATRVGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKARIIPRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKKSSVGKAKASASASQDY 185          
BLAST of mRNA_H-elongata_contig15198.3441.1 vs. uniprot
Match: A0A6H5KG79_9PHAE (Histone H2A n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KG79_9PHAE)

HSP 1 Score: 222 bits (566), Expect = 9.970e-73
Identity = 124/134 (92.54%), Postives = 126/134 (94.03%), Query Frame = 0
Query:    7 GKGKGGRGDKKSASKSSKAGLQFPVARIGRYLKRGKYASRVGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKARIIPRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKKS---GPGKAKSSASQDY 137
            GKGKGGRG KKS SKSSKAGLQFPVARIGRYLKRGKYA+RVGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKARIIPRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKKS   G  KA +SASQDY
Sbjct:    3 GKGKGGRG-KKSTSKSSKAGLQFPVARIGRYLKRGKYATRVGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKARIIPRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKKSSVGGKAKASASASQDY 135          
BLAST of mRNA_H-elongata_contig15198.3441.1 vs. uniprot
Match: A0A7S2CIK1_9STRA (Histone H2A n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2CIK1_9STRA)

HSP 1 Score: 203 bits (517), Expect = 3.020e-65
Identity = 112/134 (83.58%), Postives = 119/134 (88.81%), Query Frame = 0
Query:    7 GKGKGGRGDK--KSASKSSKAGLQFPVARIGRYLKRGKYASRVGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKARIIPRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKKSGPGK-AKSSASQDY 137
            GKGK GRG    K  SKSSKAGLQFPVAR+GRYLK+GK+A+RVGAGAPVYLAAVLEYL AE+LELAGNAARDNKK RI PRHIQLAVRNDEELNKLLG VTI+SGGVLPNIHAVLLPKK+G  K AK SASQDY
Sbjct:    3 GKGKSGRGKTGGKVTSKSSKAGLQFPVARVGRYLKKGKFATRVGAGAPVYLAAVLEYLCAEILELAGNAARDNKKTRITPRHIQLAVRNDEELNKLLGNVTISSGGVLPNIHAVLLPKKTGKAKLAKGSASQDY 136          
BLAST of mRNA_H-elongata_contig15198.3441.1 vs. uniprot
Match: B7FWQ2_PHATC (Histone H2A n=9 Tax=Bacillariophyta TaxID=2836 RepID=B7FWQ2_PHATC)

HSP 1 Score: 202 bits (515), Expect = 4.400e-65
Identity = 107/128 (83.59%), Postives = 119/128 (92.97%), Query Frame = 0
Query:    1 MSGKAGGKGKGGRGDKKSASKSSKAGLQFPVARIGRYLKRGKYASRVGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKARIIPRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKKSGPGK 128
            MSGK  GKGKGGRGDKKS + S+KAGLQFPV RIGRYL++GKYA+R+GAGAPVYLAAVLEYL AE+LELAGNAARDNKK+RI+PRHI LAV+NDEELNKLLG VTIA+GGVLPNIHA+LLPKKSGP K
Sbjct:    1 MSGK--GKGKGGRGDKKSTTASAKAGLQFPVGRIGRYLRQGKYATRMGAGAPVYLAAVLEYLCAEILELAGNAARDNKKSRIVPRHITLAVKNDEELNKLLGGVTIAAGGVLPNIHAILLPKKSGPTK 126          
BLAST of mRNA_H-elongata_contig15198.3441.1 vs. uniprot
Match: D7FWI9_ECTSI (Histone H2A n=6 Tax=Ectocarpus TaxID=2879 RepID=D7FWI9_ECTSI)

HSP 1 Score: 202 bits (514), Expect = 5.490e-65
Identity = 108/118 (91.53%), Postives = 115/118 (97.46%), Query Frame = 0
Query:    7 GKGKGGRGDKKSASKSSKAGLQFPVARIGRYLKRGKYASRVGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKARIIPRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKKS 124
            GKGKGGRG KKS ++S+KAGLQFPV R+GR+LK+GKYASRVGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKARIIPRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKK+
Sbjct:    3 GKGKGGRG-KKSTTRSAKAGLQFPVGRVGRFLKKGKYASRVGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKARIIPRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKKT 119          
BLAST of mRNA_H-elongata_contig15198.3441.1 vs. uniprot
Match: A0A835ZLE9_9STRA (Histone H2A n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZLE9_9STRA)

HSP 1 Score: 201 bits (511), Expect = 2.820e-64
Identity = 108/137 (78.83%), Postives = 124/137 (90.51%), Query Frame = 0
Query:    7 GKGKGGRGDKKSASKSSKAGLQFPVARIGRYLKRGKYASRVGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKARIIPRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKKSGPGKAKS------SASQDY 137
            GKGKGGRGDKK+ SKS+KAGLQFPV R+GR+LK+G+YA RVGAGAPVY+AAV+EYL AEVLEL+GNAARDNKK+RIIPRHIQLAVRNDEELNKLLG+VTIA+GGVLPNIHAVLLPKK+   K+K+      SASQ+Y
Sbjct:    5 GKGKGGRGDKKAVSKSAKAGLQFPVGRVGRFLKQGRYAKRVGAGAPVYMAAVMEYLCAEVLELSGNAARDNKKSRIIPRHIQLAVRNDEELNKLLGKVTIAAGGVLPNIHAVLLPKKTRS-KSKAAEASTASASQEY 140          
BLAST of mRNA_H-elongata_contig15198.3441.1 vs. uniprot
Match: D7G193_ECTSI (Histone H2A n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G193_ECTSI)

HSP 1 Score: 202 bits (514), Expect = 3.190e-64
Identity = 108/118 (91.53%), Postives = 115/118 (97.46%), Query Frame = 0
Query:    7 GKGKGGRGDKKSASKSSKAGLQFPVARIGRYLKRGKYASRVGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKARIIPRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKKS 124
            GKGKGGRG KKS ++S+KAGLQFPV R+GR+LK+GKYASRVGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKARIIPRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKK+
Sbjct:   48 GKGKGGRG-KKSTTRSAKAGLQFPVGRVGRFLKKGKYASRVGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKARIIPRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKKT 164          
BLAST of mRNA_H-elongata_contig15198.3441.1 vs. uniprot
Match: W7TMB5_9STRA (Histone H2A n=4 Tax=Monodopsidaceae TaxID=425072 RepID=W7TMB5_9STRA)

HSP 1 Score: 198 bits (503), Expect = 3.970e-63
Identity = 106/133 (79.70%), Postives = 115/133 (86.47%), Query Frame = 0
Query:    7 GKGKGGRGDKKSA--SKSSKAGLQFPVARIGRYLKRGKYASRVGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKARIIPRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKKSGPGKAKSSASQDY 137
            GKGK GRG  K    S+SSKAGLQFPV RI R+LK+G+YA+RVG+GAPVYLAAVLEYLTAE+LELAGNAARDNKK RIIPRH+QLAVRNDEELNKLLG VTIASGGVLPNIH+VLLPK  G    K SASQDY
Sbjct:    3 GKGKSGRGGGKKGGVSRSSKAGLQFPVGRISRFLKKGRYAARVGSGAPVYLAAVLEYLTAEILELAGNAARDNKKTRIIPRHVQLAVRNDEELNKLLGGVTIASGGVLPNIHSVLLPKSKGKKSGKGSASQDY 135          
BLAST of mRNA_H-elongata_contig15198.3441.1 vs. uniprot
Match: A0A7S3UYM8_HETAK (Histone H2A n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UYM8_HETAK)

HSP 1 Score: 199 bits (505), Expect = 4.590e-63
Identity = 108/133 (81.20%), Postives = 116/133 (87.22%), Query Frame = 0
Query:    5 AGGKGKGGRGDKKSASKSSKAGLQFPVARIGRYLKRGKYASRVGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKARIIPRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKKSGPGKAKSSASQDY 137
            AGGK   G   KKS SKSSKAGLQFPV RIGRYLK G+Y++RVGAGAPVYLAAVLEYL AE+LELAGNAARDNKK RIIPRH+QLAVRNDEELNKLLG VTI+ GGVLPNIH VLLPKKSG G +K SASQ+Y
Sbjct:   30 AGGKAAAGGRGKKSQSKSSKAGLQFPVGRIGRYLKNGRYSARVGAGAPVYLAAVLEYLCAEILELAGNAARDNKKTRIIPRHLQLAVRNDEELNKLLGGVTISQGGVLPNIHTVLLPKKSG-GSSKGSASQEY 161          
BLAST of mRNA_H-elongata_contig15198.3441.1 vs. uniprot
Match: A0A448ZH28_9STRA (Histone H2A n=12 Tax=Bacillariophyta TaxID=2836 RepID=A0A448ZH28_9STRA)

HSP 1 Score: 197 bits (501), Expect = 5.260e-63
Identity = 101/119 (84.87%), Postives = 113/119 (94.96%), Query Frame = 0
Query:    7 GKGKGGRGDKKSASKSSKAGLQFPVARIGRYLKRGKYASRVGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKARIIPRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKKSG 125
            GKGKGGRG+KKS + S+KAGLQFPV RIGRYL++GKYA+R+GAGAPVYLAAVLEYL AE+LELAGNAARDNKK+RI+PRHI LAV+NDEELNKLLG VTIASGGVLPNIHA+LLPKKSG
Sbjct:    3 GKGKGGRGEKKSTTASAKAGLQFPVGRIGRYLRQGKYATRMGAGAPVYLAAVLEYLCAEILELAGNAARDNKKSRIVPRHITLAVKNDEELNKLLGGVTIASGGVLPNIHAILLPKKSG 121          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig15198.3441.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FVQ5_ECTSI9.040e-7393.98Histone H2A n=1 Tax=Ectocarpus siliculosus TaxID=2... [more]
A0A6H5KG79_9PHAE9.970e-7392.54Histone H2A n=1 Tax=Ectocarpus sp. CCAP 1310/34 Ta... [more]
A0A7S2CIK1_9STRA3.020e-6583.58Histone H2A n=1 Tax=Dictyocha speculum TaxID=35687... [more]
B7FWQ2_PHATC4.400e-6583.59Histone H2A n=9 Tax=Bacillariophyta TaxID=2836 Rep... [more]
D7FWI9_ECTSI5.490e-6591.53Histone H2A n=6 Tax=Ectocarpus TaxID=2879 RepID=D7... [more]
A0A835ZLE9_9STRA2.820e-6478.83Histone H2A n=2 Tax=Tribonema minus TaxID=303371 R... [more]
D7G193_ECTSI3.190e-6491.53Histone H2A n=1 Tax=Ectocarpus siliculosus TaxID=2... [more]
W7TMB5_9STRA3.970e-6379.70Histone H2A n=4 Tax=Monodopsidaceae TaxID=425072 R... [more]
A0A7S3UYM8_HETAK4.590e-6381.20Histone H2A n=1 Tax=Heterosigma akashiwo TaxID=282... [more]
A0A448ZH28_9STRA5.260e-6384.87Histone H2A n=12 Tax=Bacillariophyta TaxID=2836 Re... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002119Histone H2APRINTSPR00620HISTONEH2Acoord: 75..89
score: 77.52
coord: 46..61
score: 90.36
coord: 103..121
score: 76.04
coord: 61..74
score: 90.54
coord: 17..39
score: 62.86
IPR002119Histone H2ASMARTSM00414h2a4coord: 6..126
e-value: 1.0E-77
score: 274.2
IPR007125Histone H2A/H2B/H3PFAMPF00125Histonecoord: 12..92
e-value: 8.3E-16
score: 58.5
IPR009072Histone-foldGENE3D1.10.20.10coord: 5..132
e-value: 1.7E-61
score: 207.6
IPR009072Histone-foldSUPERFAMILY47113Histone-foldcoord: 7..125
IPR032454Histone H2A, C-terminal domainPFAMPF16211Histone_H2A_Ccoord: 95..128
e-value: 1.5E-19
score: 69.4
NoneNo IPR availablePANTHERPTHR23430:SF238coord: 5..135
NoneNo IPR availablePANTHERPTHR23430HISTONE H2Acoord: 5..135
IPR032458Histone H2A conserved sitePROSITEPS00046HISTONE_H2Acoord: 25..31

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig15198contigH-elongata_contig15198:3247..5124 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig15198.3441.1mRNA_H-elongata_contig15198.3441.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig15198 3247..5589 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig15198.3441.1 ID=prot_H-elongata_contig15198.3441.1|Name=mRNA_H-elongata_contig15198.3441.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=138bp
MSGKAGGKGKGGRGDKKSASKSSKAGLQFPVARIGRYLKRGKYASRVGAG
APVYLAAVLEYLTAEVLELAGNAARDNKKARIIPRHIQLAVRNDEELNKL
LGEVTIASGGVLPNIHAVLLPKKSGPGKAKSSASQDY*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002119Histone_H2A
IPR007125Histone_H2A/H2B/H3
IPR009072Histone-fold
IPR032454Histone_H2A_C
IPR032458Histone_H2A_CS