prot_H-elongata_contig15197.3439.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig15197.3439.1
Unique Nameprot_H-elongata_contig15197.3439.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length392
Homology
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BLAST of mRNA_H-elongata_contig15197.3439.1 vs. uniprot
Match: D8LGR7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LGR7_ECTSI)

HSP 1 Score: 194 bits (493), Expect = 8.220e-54
Identity = 150/405 (37.04%), Postives = 194/405 (47.90%), Query Frame = 0 
Query:   35 RIDAAIQRAMAIDAERGAQTFYNNTITPQISGTSSSASSAFHPSAITPSVQHYPEHMPPGR---RPAMNDRGAYGQFKAYHDQMEPVEEISVGY-SKPPRSNRVDGIPEMNGDNGAMGGRTT------------GAG---------------------------------RTRSTWV-RAGGEATPAMVWRPTRGAGADEGAGGIAAGEPGERDVGMGFPLLEAEDGKFMGPGVETGRGGTQAATSAPEWTVPVDSDDGDNDIQRD--ASNDRGIVLTPTEASASQSLTEGDNQITFAKFIEVMTGPGLRVRKHHRAGKGNSGLRVLRYNEEDDALTWDSHKILGAPHHVLPIADVEELSLQDDNRVVLTCVGGRDSYAVFEAANTDAAVVLFSGLKRLRDRTIS 387
            RIDAAI+ AMA DA RGA TF    +TP+      SA+S   P          P     G    R + +  G  G ++ Y+         S GY ++PP ++  D +   +  + +M G               G G                                 +TR+ W  RA     P   W+P     A+E     ++   G  D  +    L  +  +      +    G  A    P+   PV +D G      D       G+ LTP        L +G + I+ AKF+EVMTGPGLRVRKHHRAGKG+SGLRVLRYN E D+LTWDSHKILGA  HVLP++DVE +S+Q   RVVL CVGG+DSYAVFEAAN DAA VL+ GL+RLR+RT S
Sbjct:   70 RIDAAIKAAMAHDATRGANTFNRLNLTPE-----GSAASLGGPGRGXXXXXXAPYPRMGGGDYYRDSGSGSGYAGAYRTYNPGSASGGGDSTGYMNRPPAAD--DSVATGSVSHRSMSGXXXXXXXXXXXXXXXGVGAAAMDPFFHRVPXXXXXXXXXXXXXXAPHHHQQQTRAIWEPRANVPPAPRPAWQPDPSVEAEEPEDTSSSASSGGGDARL--AKLHPQPSRDFQEHHQADSMGAIAPPERPQDMPPVRTDGGSGGDALDHMGGGGAGVALTPAGYDEPLELPDGCHHISLAKFLEVMTGPGLRVRKHHRAGKGSSGLRVLRYNAEGDSLTWDSHKILGAAQHVLPMSDVENVSMQPGKRVVLMCVGGKDSYAVFEAANDDAAAVLYVGLERLRERTQS 465
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig15197.3439.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LGR7_ECTSI8.220e-5437.04Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig15197contigH-elongata_contig15197:2597..5989 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig15197.3439.1mRNA_H-elongata_contig15197.3439.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig15197 2..6027 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig15197.3439.1 ID=prot_H-elongata_contig15197.3439.1|Name=mRNA_H-elongata_contig15197.3439.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=392bp
MFSTRSAPSGPSSSPMVRGSDNTVSSEVSSESESRIDAAIQRAMAIDAER
GAQTFYNNTITPQISGTSSSASSAFHPSAITPSVQHYPEHMPPGRRPAMN
DRGAYGQFKAYHDQMEPVEEISVGYSKPPRSNRVDGIPEMNGDNGAMGGR
TTGAGRTRSTWVRAGGEATPAMVWRPTRGAGADEGAGGIAAGEPGERDVG
MGFPLLEAEDGKFMGPGVETGRGGTQAATSAPEWTVPVDSDDGDNDIQRD
ASNDRGIVLTPTEASASQSLTEGDNQITFAKFIEVMTGPGLRVRKHHRAG
KGNSGLRVLRYNEEDDALTWDSHKILGAPHHVLPIADVEELSLQDDNRVV
LTCVGGRDSYAVFEAANTDAAVVLFSGLKRLRDRTISQNYC*
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