prot_H-elongata_contig15175.3424.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig15175.3424.1
Unique Nameprot_H-elongata_contig15175.3424.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length152
Homology
BLAST of mRNA_H-elongata_contig15175.3424.1 vs. uniprot
Match: D7FPP9_ECTSI (Alanine--tRNA ligase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FPP9_ECTSI)

HSP 1 Score: 220 bits (561), Expect = 4.540e-64
Identity = 110/149 (73.83%), Postives = 125/149 (83.89%), Query Frame = 0
Query:    1 MDWLSKRGIEATVTSDRYIWHQQPAALVLAVFGGKGEGEDGVGFVSCASI--DESEPKNIGMVLDRSSFYAEGGGQIYDTGKLSFEDGSGSVAVKQVTNFGAYVLHIGEVTAGTISVGSRVLCQVDYERRAKVAPNHTMTHVLNFALRK 147
            MDWLSKR  EAT  S RY WHQQPAA VLA+F GKGEGEDGVGFV  AS   DE++ + +G+VLD +SFYAEGGGQIYD G+LS  DGSGS AV+QV++FGAY LHIG+V AGT+SVGS V+C+VDYERRA VAPNHTMTHVLNFALRK
Sbjct:  500 MDWLSKRDTEATEASGRYTWHQQPAAKVLALFVGKGEGEDGVGFVPSASAVADEADQQTVGVVLDCTSFYAEGGGQIYDIGELSLSDGSGSFAVRQVSSFGAYTLHIGQVKAGTLSVGSDVVCKVDYERRANVAPNHTMTHVLNFALRK 648          
BLAST of mRNA_H-elongata_contig15175.3424.1 vs. uniprot
Match: A0A6H5L0C8_9PHAE (Alanine--tRNA ligase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L0C8_9PHAE)

HSP 1 Score: 177 bits (450), Expect = 3.130e-49
Identity = 93/131 (70.99%), Postives = 107/131 (81.68%), Query Frame = 0
Query:   25 AALVLAVFGGKGEGEDGVGFVSCAS--IDESEPKNIGMVLDRSSFYAEGGGQIYDTGKLSFEDGSGSVAVKQVTNFGAYVLHIG------EVTAGTISVGSRVLCQVDYERRAKVAPNHTMTHVLNFALRK 147
            A  VLA+F GKGEGEDGVGFV  AS  +DE++ + +G+VLD +SFYAEGGGQIYD G+LS  DGSGS AV+QV+NFGAY LHIG      EV AGT+SVGS V+C+VDYERRA VAPNHTMTHVLNFALRK
Sbjct:  386 AEQVLALFVGKGEGEDGVGFVPSASAVVDEADQQTVGVVLDCTSFYAEGGGQIYDIGELSLSDGSGSFAVRQVSNFGAYTLHIGQYYGAVEVKAGTLSVGSDVVCKVDYERRANVAPNHTMTHVLNFALRK 516          
BLAST of mRNA_H-elongata_contig15175.3424.1 vs. uniprot
Match: A0A7R9WDE1_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9WDE1_9STRA)

HSP 1 Score: 143 bits (360), Expect = 2.310e-39
Identity = 70/150 (46.67%), Postives = 99/150 (66.00%), Query Frame = 0
Query:    3 WLSKRGIEATVTSDRYIWHQQPAALVL-AVFGGKGEGEDGVGFVSCASIDESEPKNIGMVLDRSSFYAEGGGQIYDTGKLSFEDGSGSVAVKQVTNFGAYVLHIGEVTAGTISVGSRVLCQVDYERRAKVAPNHTMTHVLNFALRKARTT 151
            +L   G++ T    +Y+W+++       A+F G+GE EDG+GFV   S D     ++G+VLD++SFYAE GGQIYDTG +    G  ++ +  V ++G +VLH+GEVT GT+ +G  V C VDY RR+ VA NHTMTH+LNFAL+ A  T
Sbjct:    8 YLVNDGVKGTDDEAKYVWNEELGGCTAKALFVGRGETEDGIGFVDTISADSG---SVGLVLDKTSFYAEAGGQIYDTGIIKSTAGGCTIKIDNVQSYGQFVLHVGEVTQGTLKLGEEVTCGVDYGRRSPVASNHTMTHILNFALKDALIT 154          
BLAST of mRNA_H-elongata_contig15175.3424.1 vs. uniprot
Match: W7TIB5_9STRA (Alanine--tRNA ligase n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TIB5_9STRA)

HSP 1 Score: 145 bits (366), Expect = 1.810e-37
Identity = 69/145 (47.59%), Postives = 101/145 (69.66%), Query Frame = 0
Query:    3 WLSKRGIEATVTSDRYIWHQQPAALVLAVFGGKGEGEDGVGFVSCASIDESEPKNIGMVLDRSSFYAEGGGQIYDTGKLSFEDGSGSVAVKQVTNFGAYVLHIGEVTAGTISVGSRVLCQVDYERRAKVAPNHTMTHVLNFALRK 147
            WL  RG+E T +S +Y+WH +P+A V+A++ GK      VGFV   + ++     + ++L+ +SFYAE GGQI+DTG ++  DG+ ++ V  V ++G YVLHIG + +G + VG    C VDYERRA++APNHTMTHVLN+ALR+
Sbjct:  508 WLQSRGVEITDSSLKYVWHHEPSARVMALYKGKA-----VGFVEEVTAEDGV---VAVILNTTSFYAEQGGQIHDTGVITNLDGTDTLRVDSVQSYGGYVLHIGPLESGALRVGDTATCMVDYERRARIAPNHTMTHVLNYALRR 644          
BLAST of mRNA_H-elongata_contig15175.3424.1 vs. uniprot
Match: A0A7S1ZG71_TRICV (Alanine--tRNA ligase n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1ZG71_TRICV)

HSP 1 Score: 142 bits (357), Expect = 2.960e-36
Identity = 76/149 (51.01%), Postives = 102/149 (68.46%), Query Frame = 0
Query:    4 LSKRGIEATVTSDRYIWHQQPAALVL-AVFGGKGEGEDGVGFVSCASIDESEPKNIGMVLDRSSFYAEGGGQIYDTGKLSFEDGSGSVAVKQVTNFGAYVLHIGEVTAGTISVGSRVLCQVDYERRAKVAPNHTMTHVLNFALRKARTT 151
            L   G+EAT    +Y+W+Q+       A+F G+GE EDGVGFV   SI+ +E   +G+VLD+++FYAE GGQIYDTG +    G G V V  V  +G +VLHIGEVT GT+++G  ++C VDY+RR+ +A NHTMTHVLNFAL+    T
Sbjct:  558 LVSDGVEATDDEAKYMWNQELGGCAAKALFVGRGETEDGVGFVP--SIN-AESGMVGLVLDKTAFYAEAGGQIYDTGSIK-TSGGGVVRVDNVQAYGQFVLHIGEVTEGTVNLGDELICCVDYKRRSPIAANHTMTHVLNFALKDVLVT 702          
BLAST of mRNA_H-elongata_contig15175.3424.1 vs. uniprot
Match: A0A6V2C2S3_9STRA (Alanine--tRNA ligase n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6V2C2S3_9STRA)

HSP 1 Score: 141 bits (356), Expect = 4.000e-36
Identity = 71/150 (47.33%), Postives = 102/150 (68.00%), Query Frame = 0
Query:    3 WLSKRGIEATVTSDRYIWHQQPAAL-VLAVFGGKGEGEDGVGFVSCASIDESEPKNIGMVLDRSSFYAEGGGQIYDTGKLSFEDGSGSVAVKQVTNFGAYVLHIGEVTAGTISVGSRVLCQVDYERRAKVAPNHTMTHVLNFALRKARTT 151
            +L+ + + ATV  D+Y+W Q+ +      +F G+GE EDG+GFV   S   SE   +G+VLD++SFYAE GGQ+ D+G L+   G+ ++ V  V  +G + LH+GEVT+GT+S+G  V CQVDY+RR  +A NHTMTHVLN+AL+    T
Sbjct:  495 FLAGKEVPATVDDDKYVWDQELSGCKACGLFIGRGETEDGIGFVDSIS---SESGGVGIVLDKTSFYAEAGGQVADSGTLTTSSGA-TIRVDNVQMYGMFALHLGEVTSGTLSLGDEVTCQVDYQRRKPIASNHTMTHVLNYALQDVLVT 640          
BLAST of mRNA_H-elongata_contig15175.3424.1 vs. uniprot
Match: A0A7S4GJP2_9EUGL (Alanine--tRNA ligase n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S4GJP2_9EUGL)

HSP 1 Score: 140 bits (354), Expect = 7.490e-36
Identity = 74/143 (51.75%), Postives = 90/143 (62.94%), Query Frame = 0
Query:    4 LSKRGIEATVTSDRYIWHQQPAALVLAVFGGKGEGEDGVGFVSCASIDESEPKNIGMVLDRSSFYAEGGGQIYDTGKLSFEDGSGSVAVKQVTNFGAYVLHIGEVTAGTISVGSRVLCQVDYERRAKVAPNHTMTHVLNFALR 146
            L + G+E T   D+Y WH  P+A V A+F G GEGE G+GFV  A         +G+VLD S FY E GGQ+ DTG+L    G G++ V+    +G +VLH G V  G + VG  V C VDYERRA VAPNHTMTHVLN ALR
Sbjct:  555 LQQTGVEVTDAGDKYNWHVTPSATVKALFIGVGEGEGGLGFVDVADASTGP---VGVVLDASPFYPEAGGQVADTGRLQ---GPGTMHVENTQIYGGFVLHTGSVPTGELRVGDAVQCAVDYERRAHVAPNHTMTHVLNHALR 691          
BLAST of mRNA_H-elongata_contig15175.3424.1 vs. uniprot
Match: A0A7R9U5A7_9STRA (Alanine--tRNA ligase (Fragment) n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U5A7_9STRA)

HSP 1 Score: 140 bits (352), Expect = 1.330e-35
Identity = 72/147 (48.98%), Postives = 95/147 (64.63%), Query Frame = 0
Query:    3 WLSKRGIEATVTSDRYIWHQQPAALVLAVFGGKGEGEDGVGFVSCASIDESEPKNIGMVLDRSSFYAEGGGQIYDTGKLSFEDGSGSVAVKQVTN---FGAYVLHIGEVTAGTISVGSRVLCQVDYERRAKVAPNHTMTHVLNFALR 146
            WL+ +G   + T  +Y W+  P   V A F G+G G+DG+GF    S  +     +G+VLD +SFYAE GGQI+DTG +    G+ + A+ +V +   FG+YVLHIG V  G  + GSRV C VDY RR +VAPNHTMTHVLN+ALR
Sbjct:  577 WLANQGFGPSETRGKYNWNSTPTVTVQACFLGRGLGKDGIGFADSVSPGDEV---VGLVLDSTSFYAEAGGQIFDTGVIRGASGAEANAIMRVESVQVFGSYVLHIGVVEMGAFTPGSRVTCMVDYARRERVAPNHTMTHVLNYALR 720          
BLAST of mRNA_H-elongata_contig15175.3424.1 vs. uniprot
Match: A0A7S3L1R5_9STRA (Alanine--tRNA ligase n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3L1R5_9STRA)

HSP 1 Score: 138 bits (347), Expect = 6.500e-35
Identity = 72/147 (48.98%), Postives = 97/147 (65.99%), Query Frame = 0
Query:    4 LSKRGIEATVTSDRYIWHQQ-PAALVLAVFGGKGEGEDGVGFVSCASIDESEPKN--IGMVLDRSSFYAEGGGQIYDTGKLSFEDGSGSVAVKQVTNFGAYVLHIGEVTAGTISVGSRVLCQVDYERRAKVAPNHTMTHVLNFALRK 147
            L  +G+EAT    +Y+W+Q+     V A+F G+ E ED +GFV     DE  P++  +G++LD++SFYAE GGQ+YDTG +    G+  + V+ V  +G YVLH+GEV +GT   G  V C VDY RR  +A NHTMTHVLNFALRK
Sbjct:  485 LVTKGVEATNDEPKYVWNQELTGCTVKALFIGRNETEDKIGFV-----DEISPESSTVGVILDKTSFYAEAGGQVYDTGFIKSASGA-QIKVENVQMYGQYVLHLGEVVSGTFKTGETVSCSVDYVRRGPIAANHTMTHVLNFALRK 625          
BLAST of mRNA_H-elongata_contig15175.3424.1 vs. uniprot
Match: A0A8J9T9Q1_PHATR (Hypothetical protein (Fragment) n=1 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=A0A8J9T9Q1_PHATR)

HSP 1 Score: 136 bits (343), Expect = 1.460e-34
Identity = 73/146 (50.00%), Postives = 98/146 (67.12%), Query Frame = 0
Query:    3 WLSKRGIEATVTSDRYIWHQQPA-ALVLAVFGGKGEGEDGVGFVSCASIDESEPKNIGMVLDRSSFYAEGGGQIYDTGKLSFEDGSGSVAVKQVTNFGAYVLHIGEVTAGTISVGSRVLCQVDYERRAKVAPNHTMTHVLNFALRK 147
            +L  + I AT  + +Y+WH++ A  +V A F G+ E ED +GFV   S + S    +G+VLD+SSFYAE GGQ+YD G L+   G+  V +  V  +G +VLH+GEV +GT+SVG  V C VDY RRA +A NHTMTHVLN ALR+
Sbjct:  289 YLVGQNISATDDAAKYVWHEELADCVVKACFIGRNETEDMIGFVDSISPESSA---VGIVLDKSSFYAEAGGQVYDVGTLTSSTGA-VVKITNVQAYGQFVLHLGEVASGTLSVGDTVKCSVDYVRRAPIASNHTMTHVLNHALRE 430          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig15175.3424.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FPP9_ECTSI4.540e-6473.83Alanine--tRNA ligase n=1 Tax=Ectocarpus siliculosu... [more]
A0A6H5L0C8_9PHAE3.130e-4970.99Alanine--tRNA ligase n=1 Tax=Ectocarpus sp. CCAP 1... [more]
A0A7R9WDE1_9STRA2.310e-3946.67Hypothetical protein (Fragment) n=1 Tax=Pseudictyo... [more]
W7TIB5_9STRA1.810e-3747.59Alanine--tRNA ligase n=2 Tax=Monodopsidaceae TaxID... [more]
A0A7S1ZG71_TRICV2.960e-3651.01Alanine--tRNA ligase n=1 Tax=Trieres chinensis Tax... [more]
A0A6V2C2S3_9STRA4.000e-3647.33Alanine--tRNA ligase n=2 Tax=Ditylum brightwellii ... [more]
A0A7S4GJP2_9EUGL7.490e-3651.75Alanine--tRNA ligase n=1 Tax=Eutreptiella gymnasti... [more]
A0A7R9U5A7_9STRA1.330e-3548.98Alanine--tRNA ligase (Fragment) n=1 Tax=Pinguiococ... [more]
A0A7S3L1R5_9STRA6.500e-3548.98Alanine--tRNA ligase n=1 Tax=Amphora coffeiformis ... [more]
A0A8J9T9Q1_PHATR1.460e-3450.00Hypothetical protein (Fragment) n=1 Tax=Phaeodacty... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D2.40.30.130coord: 43..123
e-value: 2.2E-10
score: 42.5
NoneNo IPR availablePANTHERPTHR11777:SF9ALANINE--TRNA LIGASE, CYTOPLASMICcoord: 8..147
NoneNo IPR availablePANTHERPTHR11777ALANYL-TRNA SYNTHETASEcoord: 8..147
IPR018164Alanyl-tRNA synthetase, class IIc, N-terminalPFAMPF01411tRNA-synt_2ccoord: 56..127
e-value: 7.9E-17
score: 61.0
IPR018165Alanyl-tRNA synthetase, class IIc, core domainPROSITEPS50860AA_TRNA_LIGASE_II_ALAcoord: 1..151
score: 14.315
IPR009000Translation protein, beta-barrel domain superfamilySUPERFAMILY50447Translation proteinscoord: 54..123

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig15175contigH-elongata_contig15175:4979..6801 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig15175.3424.1mRNA_H-elongata_contig15175.3424.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig15175 4979..6804 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig15175.3424.1 ID=prot_H-elongata_contig15175.3424.1|Name=mRNA_H-elongata_contig15175.3424.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=152bp
MDWLSKRGIEATVTSDRYIWHQQPAALVLAVFGGKGEGEDGVGFVSCASI
DESEPKNIGMVLDRSSFYAEGGGQIYDTGKLSFEDGSGSVAVKQVTNFGA
YVLHIGEVTAGTISVGSRVLCQVDYERRAKVAPNHTMTHVLNFALRKART
T*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR018164Ala-tRNA-synth_IIc_N
IPR018165Ala-tRNA-synth_IIc_core
IPR009000Transl_B-barrel_sf