prot_H-elongata_contig15161.3415.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig15161.3415.1
Unique Nameprot_H-elongata_contig15161.3415.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length119
Homology
BLAST of mRNA_H-elongata_contig15161.3415.1 vs. uniprot
Match: D8LSM6_ECTSI (GTPase Der n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LSM6_ECTSI)

HSP 1 Score: 209 bits (533), Expect = 4.700e-62
Identity = 105/124 (84.68%), Postives = 114/124 (91.94%), Query Frame = 0
Query:    1 VSIAGRPNVGKSTVVNRIARRFKDGSIVFDESGVTRDRTYKRAWYGGKDFDVVDTGGLVFEDKGGD-----IRQQAMIALEEATAVIMVVDGQAGCNVLDEEIARFLRQQRLPVFLAVNKCESQ 119
            V++ GRPNVGKSTVVNR+A+RFKDGSIVFDESGVTRDRTYKRAWY GKDFDVVDTGGLVF+DKGGD     IRQQA+IALEEATAVIMVVDG  GCNVLD+EIARFLRQQ++PV LAVNKCESQ
Sbjct:  222 VAVIGRPNVGKSTVVNRLAKRFKDGSIVFDESGVTRDRTYKRAWYCGKDFDVVDTGGLVFDDKGGDVFAKEIRQQALIALEEATAVIMVVDGIVGCNVLDQEIARFLRQQKVPVVLAVNKCESQ 345          
BLAST of mRNA_H-elongata_contig15161.3415.1 vs. uniprot
Match: A0A0M0JHB7_9EUKA (GTPase Der n=1 Tax=Chrysochromulina tobinii TaxID=1460289 RepID=A0A0M0JHB7_9EUKA)

HSP 1 Score: 154 bits (390), Expect = 3.630e-42
Identity = 72/123 (58.54%), Postives = 99/123 (80.49%), Query Frame = 0
Query:    1 VSIAGRPNVGKSTVVNRIARRFKDGSIVFDESGVTRDRTYKRAWYGGKDFDVVDTGGLVFEDKGGD-----IRQQAMIALEEATAVIMVVDGQAGCNVLDEEIARFLRQQRLPVFLAVNKCES 118
            +++ GRPNVGKST+ NR+ + F +G +VF+E+GVTRDRTY   ++GG +F VVDTGG+VF+DK G+     IRQQAM+ + EA++V++VVDGQ G  VLDE+I+ FLR+Q++PV LAVNKCES
Sbjct:   89 IAVVGRPNVGKSTIANRLTQNFHEGGLVFNEAGVTRDRTYGEGFWGGHEFTVVDTGGIVFDDKEGEVFLPQIRQQAMLGIAEASSVLLVVDGQTGKTVLDEQISAFLRRQKVPVVLAVNKCES 211          
BLAST of mRNA_H-elongata_contig15161.3415.1 vs. uniprot
Match: A0A7S0P6M6_9EUKA (GTPase Der n=1 Tax=Calcidiscus leptoporus TaxID=127549 RepID=A0A7S0P6M6_9EUKA)

HSP 1 Score: 149 bits (375), Expect = 1.440e-40
Identity = 74/123 (60.16%), Postives = 92/123 (74.80%), Query Frame = 0
Query:    1 VSIAGRPNVGKSTVVNRIARRFKDGSIVFDESGVTRDRTYKRAWYGGKDFDVVDTGGLVF-EDKGG----DIRQQAMIALEEATAVIMVVDGQAGCNVLDEEIARFLRQQRLPVFLAVNKCES 118
            +++ GRPNVGKST+VNR+ +RF  G +V DE+GVTRDRTY   W+   +F VVDTGGLVF ED+      +IRQQA++AL EA+  +MVVDGQ GC  LD EIA FLR+Q +P  LAVNKCES
Sbjct:    5 IAVVGRPNVGKSTIVNRMTQRFASGGLVHDEAGVTRDRTYGYGWWAAHEFAVVDTGGLVFDEDESNVFMREIRQQALVALREASVALMVVDGQHGCTPLDAEIASFLRKQSVPTVLAVNKCES 127          
BLAST of mRNA_H-elongata_contig15161.3415.1 vs. uniprot
Match: A0A7S0ER96_9EUKA (GTPase Der n=1 Tax=Phaeocystis antarctica TaxID=33657 RepID=A0A7S0ER96_9EUKA)

HSP 1 Score: 147 bits (371), Expect = 7.600e-40
Identity = 72/123 (58.54%), Postives = 92/123 (74.80%), Query Frame = 0
Query:    1 VSIAGRPNVGKSTVVNRIARRFKDGSIVFDESGVTRDRTYKRAWYGGKDFDVVDTGGLVFEDKGGD-----IRQQAMIALEEATAVIMVVDGQAGCNVLDEEIARFLRQQRLPVFLAVNKCES 118
            +++ GRPNVGKST+ NR+  +F  G++VFDE GVTRDRTY + ++G  +F VVDTGGLVF+D   +     IRQQA+ AL EA   +MVVDG+ GC VLD +IA FLR+Q +PV LAVNKCES
Sbjct:   27 IAVVGRPNVGKSTIFNRVTSKFGGGALVFDEPGVTRDRTYGQGFWGAHEFTVVDTGGLVFDDDPDEVFLPQIRQQALAALGEADVAVMVVDGKEGCTVLDSDIAAFLRKQDVPVVLAVNKCES 149          
BLAST of mRNA_H-elongata_contig15161.3415.1 vs. uniprot
Match: A0A7S0BDR1_9RHOD (GTPase Der (Fragment) n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S0BDR1_9RHOD)

HSP 1 Score: 146 bits (368), Expect = 7.820e-40
Identity = 76/124 (61.29%), Postives = 96/124 (77.42%), Query Frame = 0
Query:    1 VSIAGRPNVGKSTVVNRIARRFKDGSIVFDESGVTRDRTYKRAWYGGKDFDVVDTGGLVFEDKGG-----DIRQQAMIALEEATAVIMVVDGQAGCNVLDEEIARFLRQQ-RLPVFLAVNKCES 118
            V++ GRPNVGKS +VNR++  ++ GSIV D  G TRDRTY+RA++  K+F VVDTGGL+FED        +IRQQA+IALEEA AVI V DGQ G N LDE+IA FLR++ ++PV+LAVNKCES
Sbjct:   88 VAVIGRPNVGKSMIVNRLSESYRGGSIVHDLVGTTRDRTYRRAFWADKEFFVVDTGGLIFEDDPDQVFIKEIRQQALIALEEAAAVIFVTDGQQGVNPLDEQIAVFLRKECKVPVYLAVNKCES 211          
BLAST of mRNA_H-elongata_contig15161.3415.1 vs. uniprot
Match: R1BLX1_EMIHU (GTPase Der n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=R1BLX1_EMIHU)

HSP 1 Score: 145 bits (367), Expect = 2.570e-39
Identity = 71/124 (57.26%), Postives = 91/124 (73.39%), Query Frame = 0
Query:    1 VSIAGRPNVGKSTVVNRIARRFKDGSIVFDESGVTRDRTYKRAWYGGKDFDVVDTGGLVFEDKGG-----DIRQQAMIALEEATAVIMVVDGQAGCNVLDEEIARFLRQQRLPVFLAVNKCESQ 119
            V + GRPNVGKST+ NRI +++ DG+IV DE+GVTRDRTY   W+   +F VVDTGGLVF+D         IRQQA++AL +A   ++VVDGQAGC  LD +IA F+R+QR+   LAVNKCES+
Sbjct:   32 VVVVGRPNVGKSTLANRITQQYADGAIVHDEAGVTRDRTYADGWWAAHEFTVVDTGGLVFDDDAEHVFMPQIRQQAIVALRDAAVALLVVDGQAGCTPLDTDIADFMRRQRVKCVLAVNKCESE 155          
BLAST of mRNA_H-elongata_contig15161.3415.1 vs. uniprot
Match: A0A7C3PF65_9CYAN (GTPase Der n=1 Tax=Oscillatoriales cyanobacterium SpSt-418 TaxID=2282169 RepID=A0A7C3PF65_9CYAN)

HSP 1 Score: 143 bits (361), Expect = 1.550e-38
Identity = 77/121 (63.64%), Postives = 93/121 (76.86%), Query Frame = 0
Query:    1 VSIAGRPNVGKSTVVNRIARRFKDGSIVFDESGVTRDRTYKRAWYGGKDFDVVDTGGLVFEDKGG---DIRQQAMIALEEATAVIMVVDGQAGCNVLDEEIARFLRQQRLPVFLAVNKCES 118
            V+I GRPNVGKST+VNR+A+     +IV+DE GVTRDRTYKR+++G ++F VVDTGGLVF+D       IR+QAM AL EA+A I VVDGQ G    DEEIA +LRQQ +PV LAVNKCES
Sbjct:    6 VAIIGRPNVGKSTIVNRLAQ--VQDAIVYDEPGVTRDRTYKRSYWGDREFLVVDTGGLVFDDDSEFLPHIREQAMAALTEASAAIFVVDGQQGVTTSDEEIAAWLRQQSVPVLLAVNKCES 124          
BLAST of mRNA_H-elongata_contig15161.3415.1 vs. uniprot
Match: A0A7S1TET7_9RHOD (Hypothetical protein (Fragment) n=1 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A7S1TET7_9RHOD)

HSP 1 Score: 139 bits (351), Expect = 2.500e-38
Identity = 75/125 (60.00%), Postives = 97/125 (77.60%), Query Frame = 0
Query:    1 VSIAGRPNVGKSTVVNRIARRFKDGSIVFDESGVTRDRTYKRAWYGGKDFDVVDTGGLVF-EDKG----GDIRQQAMIALEEATAVIMVVDGQAGCNVLDEEIARFLRQQ-RLPVFLAVNKCESQ 119
            V++ GRPNVGKS +VNR+A  +K GSIV D  G+TRDRTY+RA++   ++ +VDTGGLVF EDK      +IR+QA++AL+EA AVI VVDGQ G N LD +IA FLR++ ++PV LAVNKCESQ
Sbjct:   60 VAVIGRPNVGKSMLVNRLAETYKGGSIVEDVVGITRDRTYRRAFWLDYEYQIVDTGGLVFREDKDIVFLKEIREQALLALDEAKAVIFVVDGQGGPNPLDHDIANFLRKECKVPVVLAVNKCESQ 184          
BLAST of mRNA_H-elongata_contig15161.3415.1 vs. uniprot
Match: A0A1Z5J8T0_FISSO (EngA-type G domain-containing protein n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5J8T0_FISSO)

HSP 1 Score: 137 bits (344), Expect = 7.400e-38
Identity = 73/127 (57.48%), Postives = 94/127 (74.02%), Query Frame = 0
Query:    1 VSIAGRPNVGKSTVVNRIARRFKDGSIVFDESGVTRDRTYKRAWYGGKDFDVVDTGGLVFEDKGG-----DIRQQAMIALEEATAVIMVVDGQAGCNVLDEEIARFLRQQ---RLPVFLAVNKCESQ 119
            ++I GRPNVGKS +VNRIA     G+IV DESG+TRDRTY+ A + G+ F VVDTGGLVF+D        +IR+QAMIA+EE+ AVI+V DGQAG + +D  IA FLR++    +PV +AVNKCES+
Sbjct:   51 IAIVGRPNVGKSALVNRIAGSQSGGAIVADESGITRDRTYRPAEFLGEHFSVVDTGGLVFDDDENTLFAKEIREQAMIAIEESAAVILVADGQAGLSPMDVAIAEFLRKEVVKDIPVLMAVNKCESE 177          
BLAST of mRNA_H-elongata_contig15161.3415.1 vs. uniprot
Match: A0A7S4FA39_CHRCT (GTPase Der n=1 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4FA39_CHRCT)

HSP 1 Score: 141 bits (356), Expect = 1.220e-37
Identity = 71/123 (57.72%), Postives = 88/123 (71.54%), Query Frame = 0
Query:    1 VSIAGRPNVGKSTVVNRIARRFKDGSIVFDESGVTRDRTYKRAWYGGKDFDVVDTGGLVFEDKGGD-----IRQQAMIALEEATAVIMVVDGQAGCNVLDEEIARFLRQQRLPVFLAVNKCES 118
            +++ GRPNVGKST+VNR+  +F  G +V DE GVTRDRTY   ++G  +F VVDTGGLVF+D         IRQQA +AL EA   +MVVDGQ GC  LD +IA FLR+Q++P  LAVNKCES
Sbjct:   28 IAVLGRPNVGKSTIVNRMTGKFNGGGLVHDEPGVTRDRTYGLGFWGAHEFMVVDTGGLVFDDDPTQTFMPQIRQQASLALAEAAVAVMVVDGQMGCTPLDADIADFLRKQKVPTVLAVNKCES 150          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig15161.3415.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LSM6_ECTSI4.700e-6284.68GTPase Der n=2 Tax=Ectocarpus TaxID=2879 RepID=D8L... [more]
A0A0M0JHB7_9EUKA3.630e-4258.54GTPase Der n=1 Tax=Chrysochromulina tobinii TaxID=... [more]
A0A7S0P6M6_9EUKA1.440e-4060.16GTPase Der n=1 Tax=Calcidiscus leptoporus TaxID=12... [more]
A0A7S0ER96_9EUKA7.600e-4058.54GTPase Der n=1 Tax=Phaeocystis antarctica TaxID=33... [more]
A0A7S0BDR1_9RHOD7.820e-4061.29GTPase Der (Fragment) n=1 Tax=Rhodosorus marinus T... [more]
R1BLX1_EMIHU2.570e-3957.26GTPase Der n=1 Tax=Emiliania huxleyi TaxID=2903 Re... [more]
A0A7C3PF65_9CYAN1.550e-3863.64GTPase Der n=1 Tax=Oscillatoriales cyanobacterium ... [more]
A0A7S1TET7_9RHOD2.500e-3860.00Hypothetical protein (Fragment) n=1 Tax=Compsopogo... [more]
A0A1Z5J8T0_FISSO7.400e-3857.48EngA-type G domain-containing protein n=1 Tax=Fist... [more]
A0A7S4FA39_CHRCT1.220e-3757.72GTPase Der n=1 Tax=Chrysotila carterae TaxID=13221... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006073GTP binding domainPRINTSPR00326GTP1OBGcoord: 1..19
score: 40.97
coord: 68..86
score: 20.96
coord: 52..67
score: 27.05
IPR006073GTP binding domainPFAMPF01926MMR_HSR1coord: 1..115
e-value: 1.3E-21
score: 76.8
IPR005225Small GTP-binding protein domainTIGRFAMTIGR00231TIGR00231coord: 1..117
e-value: 3.9E-14
score: 50.7
NoneNo IPR availableGENE3D3.40.50.300coord: 1..119
e-value: 4.9E-26
score: 93.4
NoneNo IPR availablePANTHERPTHR43834:SF2CLAMP-BINDING PROTEIN CRFC-RELATEDcoord: 1..118
NoneNo IPR availablePANTHERPTHR43834FAMILY NOT NAMEDcoord: 1..118
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 1..117

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig15161contigH-elongata_contig15161:3814..4776 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig15161.3415.1mRNA_H-elongata_contig15161.3415.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig15161 3814..4776 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig15161.3415.1 ID=prot_H-elongata_contig15161.3415.1|Name=mRNA_H-elongata_contig15161.3415.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=119bp
VSIAGRPNVGKSTVVNRIARRFKDGSIVFDESGVTRDRTYKRAWYGGKDF
DVVDTGGLVFEDKGGDIRQQAMIALEEATAVIMVVDGQAGCNVLDEEIAR
FLRQQRLPVFLAVNKCESQ
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006073GTP_binding_domain
IPR005225Small_GTP-bd_dom
IPR027417P-loop_NTPase