prot_H-elongata_contig151458.3408.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig151458.3408.1
Unique Nameprot_H-elongata_contig151458.3408.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length96
Homology
BLAST of mRNA_H-elongata_contig151458.3408.1 vs. uniprot
Match: D7FQG0_ECTSI (Lactamase_B domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQG0_ECTSI)

HSP 1 Score: 121 bits (304), Expect = 2.270e-31
Identity = 56/90 (62.22%), Postives = 70/90 (77.78%), Query Frame = 0
Query:    3 RLYCGHGPAVDFADDKIKFYIAHRQEREDQIVEALAEAKDRSLSSLQIVLRVYGFLSIPLLLSAHYNVLQHLSKLCAEGKTKGGCFPCSF 92
            RLYCGHGP V+ A +KI++YI HRQERE QI+ AL  AK R+LS+LQI +RVYG + +P+ +SAHYNVL HLSKL +EGK   G  PCS+
Sbjct:  240 RLYCGHGPVVEAAQEKIEYYIKHRQEREAQIINALTAAKGRTLSALQITVRVYGAVPLPIFVSAHYNVLHHLSKLASEGKVVLGWVPCSY 329          
BLAST of mRNA_H-elongata_contig151458.3408.1 vs. uniprot
Match: A0A6H5K7T3_9PHAE (Lactamase_B domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K7T3_9PHAE)

HSP 1 Score: 119 bits (299), Expect = 6.260e-31
Identity = 56/90 (62.22%), Postives = 68/90 (75.56%), Query Frame = 0
Query:    3 RLYCGHGPAVDFADDKIKFYIAHRQEREDQIVEALAEAKDRSLSSLQIVLRVYGFLSIPLLLSAHYNVLQHLSKLCAEGKTKGGCFPCSF 92
            RLYCGHGP V+ A +KI++YI HRQERE QI+ AL  AK R+LS+ QI +RVYG L +P+ +SAHYNVL HLSKL  EG+   G  PCSF
Sbjct:  204 RLYCGHGPVVEAAQEKIEYYIKHRQEREAQIMNALTAAKGRTLSAFQITVRVYGVLPLPIFVSAHYNVLHHLSKLTREGRAVLGWVPCSF 293          
BLAST of mRNA_H-elongata_contig151458.3408.1 vs. uniprot
Match: A0A212EVV0_DANPL (Beta-lactamase protein 2 n=2 Tax=Danaus TaxID=13036 RepID=A0A212EVV0_DANPL)

HSP 1 Score: 70.9 bits (172), Expect = 1.670e-12
Identity = 36/83 (43.37%), Postives = 50/83 (60.24%), Query Frame = 0
Query:    2 GRLYCGHGPAVDFADDKIKFYIAHRQEREDQIVEALAEAKDRSLSSLQIVLRVYGFLSIPLLLSAHYNVLQHLSKLCAEGKTK 84
            G +Y GHG  VD   +KI++YIAHR +RE+QI+E L    D+ L+ + +V  +Y      L  +A YNV  HL+KL  E K K
Sbjct:  192 GTIYPGHGNVVDDPIEKIQYYIAHRNQREEQILETLRNNSDKQLNEMDLVQLIYTETPEHLWAAAAYNVNHHLTKLTKENKIK 274          
BLAST of mRNA_H-elongata_contig151458.3408.1 vs. uniprot
Match: A0A2I4CMS0_9TELE (Endoribonuclease LACTB2 n=1 Tax=Austrofundulus limnaeus TaxID=52670 RepID=A0A2I4CMS0_9TELE)

HSP 1 Score: 70.5 bits (171), Expect = 2.200e-12
Identity = 36/79 (45.57%), Postives = 51/79 (64.56%), Query Frame = 0
Query:    4 LYCGHGPAVDFADDKIKFYIAHRQEREDQIVEALAEAKDRSLSSLQIVLRVYGFLSIPLLLSAHYNVLQHLSKLCAEGK 82
            +Y GHGP V  A  KI++YIAHR +RE QI+ A+ +   R+ SS+++V  VY      L L+A+ N++ HL KL  EGK
Sbjct:  192 IYPGHGPVVQDAGTKIRYYIAHRDQREQQILAAIQDGAGRAFSSMELVKIVYKDTPEHLHLAANVNLVHHLKKLEKEGK 270          
BLAST of mRNA_H-elongata_contig151458.3408.1 vs. uniprot
Match: A0A3P8X6N9_CYNSE (Endoribonuclease LACTB2 n=4 Tax=Cynoglossus semilaevis TaxID=244447 RepID=A0A3P8X6N9_CYNSE)

HSP 1 Score: 70.5 bits (171), Expect = 2.410e-12
Identity = 38/86 (44.19%), Postives = 53/86 (61.63%), Query Frame = 0
Query:    1 VGRLYCGHGPAVDFADDKIKFYIAHRQEREDQIVEALAEAKDRSLSSLQIVLRVYGFLSIPLLLSAHYNVLQHLSKLCAEGKTKGG 86
            V  +Y GHGP V  A  KI  YI+HRQ+RE QI+EA+ +A  + L+S+++V  VY      L  +A+ N+L HL KL  +GK   G
Sbjct:  184 VDLIYPGHGPVVHDAASKITHYISHRQQREQQILEAVLDADGKPLTSMELVKVVYKDTPEHLHQAANVNLLHHLRKLEKDGKISSG 269          
BLAST of mRNA_H-elongata_contig151458.3408.1 vs. uniprot
Match: UPI0007DCA31C (endoribonuclease LACTB2 isoform X2 n=2 Tax=Cynoglossus semilaevis TaxID=244447 RepID=UPI0007DCA31C)

HSP 1 Score: 70.5 bits (171), Expect = 2.490e-12
Identity = 38/86 (44.19%), Postives = 53/86 (61.63%), Query Frame = 0
Query:    1 VGRLYCGHGPAVDFADDKIKFYIAHRQEREDQIVEALAEAKDRSLSSLQIVLRVYGFLSIPLLLSAHYNVLQHLSKLCAEGKTKGG 86
            V  +Y GHGP V  A  KI  YI+HRQ+RE QI+EA+ +A  + L+S+++V  VY      L  +A+ N+L HL KL  +GK   G
Sbjct:  188 VDLIYPGHGPVVHDAASKITHYISHRQQREQQILEAVLDADGKPLTSMELVKVVYKDTPEHLHQAANVNLLHHLRKLEKDGKISSG 273          
BLAST of mRNA_H-elongata_contig151458.3408.1 vs. uniprot
Match: UPI001FB77B95 (endoribonuclease LACTB2 n=1 Tax=Mugil cephalus TaxID=48193 RepID=UPI001FB77B95)

HSP 1 Score: 68.6 bits (166), Expect = 1.130e-11
Identity = 35/82 (42.68%), Postives = 51/82 (62.20%), Query Frame = 0
Query:    1 VGRLYCGHGPAVDFADDKIKFYIAHRQEREDQIVEALAEAKDRSLSSLQIVLRVYGFLSIPLLLSAHYNVLQHLSKLCAEGK 82
             G +Y GHGP V  A+ KIK YI+HR +RE QI+ A+ +   ++ SS+++V  VY      L  +A+ N++ HL KL  EGK
Sbjct:  189 AGLIYPGHGPVVQDAEAKIKHYISHRDQREQQILAAIQDGAGKAFSSMELVKIVYKDTPEYLHAAANVNLVHHLKKLEKEGK 270          
BLAST of mRNA_H-elongata_contig151458.3408.1 vs. uniprot
Match: A0A3Q3EI09_9LABR (Endoribonuclease LACTB2 n=2 Tax=Labridae TaxID=8247 RepID=A0A3Q3EI09_9LABR)

HSP 1 Score: 67.4 bits (163), Expect = 3.030e-11
Identity = 33/79 (41.77%), Postives = 50/79 (63.29%), Query Frame = 0
Query:    4 LYCGHGPAVDFADDKIKFYIAHRQEREDQIVEALAEAKDRSLSSLQIVLRVYGFLSIPLLLSAHYNVLQHLSKLCAEGK 82
            +Y GHGP V  A  KI++YI+HR +RE QI+ A+ +   +  SS+++V  VY    + L  +A+ N++ HL KL  EGK
Sbjct:  193 IYPGHGPVVQDAGSKIRYYISHRDQREQQILAAIQDGAGKPFSSMELVKIVYKDTPVNLHPAANVNLVHHLKKLEKEGK 271          
BLAST of mRNA_H-elongata_contig151458.3408.1 vs. uniprot
Match: A0A6P8WDC7_GYMAC (Endoribonuclease LACTB2 n=3 Tax=Notothenioidei TaxID=8205 RepID=A0A6P8WDC7_GYMAC)

HSP 1 Score: 67.0 bits (162), Expect = 4.170e-11
Identity = 35/79 (44.30%), Postives = 50/79 (63.29%), Query Frame = 0
Query:    4 LYCGHGPAVDFADDKIKFYIAHRQEREDQIVEALAEAKDRSLSSLQIVLRVYGFLSIPLLLSAHYNVLQHLSKLCAEGK 82
            +Y GHGP V  A  KI+ YI+HR +RE QI+EA+ + +  S SS+++V  VY      L  +A+ N++ HL KL  EGK
Sbjct:  192 IYPGHGPVVQDAASKIRHYISHRAQREQQILEAIQQGEGASFSSMELVKIVYKDTPEHLHKAANVNLVHHLKKLEKEGK 270          
BLAST of mRNA_H-elongata_contig151458.3408.1 vs. uniprot
Match: UPI0014482CDC (endoribonuclease LACTB2 isoform X1 n=2 Tax=Epinephelus lanceolatus TaxID=310571 RepID=UPI0014482CDC)

HSP 1 Score: 67.0 bits (162), Expect = 4.170e-11
Identity = 34/79 (43.04%), Postives = 49/79 (62.03%), Query Frame = 0
Query:    4 LYCGHGPAVDFADDKIKFYIAHRQEREDQIVEALAEAKDRSLSSLQIVLRVYGFLSIPLLLSAHYNVLQHLSKLCAEGK 82
            +Y GHGP V+ A  KI++YI+HR ERE QI+ A+     +  SS+++V  VY      L  +A+ N++ HL KL  EGK
Sbjct:  192 IYPGHGPVVENAGSKIRYYISHRDEREQQILAAIQAGAGKPFSSMELVKIVYKDTPESLHKAANINLVHHLKKLQKEGK 270          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig151458.3408.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FQG0_ECTSI2.270e-3162.22Lactamase_B domain-containing protein n=1 Tax=Ecto... [more]
A0A6H5K7T3_9PHAE6.260e-3162.22Lactamase_B domain-containing protein n=2 Tax=Ecto... [more]
A0A212EVV0_DANPL1.670e-1243.37Beta-lactamase protein 2 n=2 Tax=Danaus TaxID=1303... [more]
A0A2I4CMS0_9TELE2.200e-1245.57Endoribonuclease LACTB2 n=1 Tax=Austrofundulus lim... [more]
A0A3P8X6N9_CYNSE2.410e-1244.19Endoribonuclease LACTB2 n=4 Tax=Cynoglossus semila... [more]
UPI0007DCA31C2.490e-1244.19endoribonuclease LACTB2 isoform X2 n=2 Tax=Cynoglo... [more]
UPI001FB77B951.130e-1142.68endoribonuclease LACTB2 n=1 Tax=Mugil cephalus Tax... [more]
A0A3Q3EI09_9LABR3.030e-1141.77Endoribonuclease LACTB2 n=2 Tax=Labridae TaxID=824... [more]
A0A6P8WDC7_GYMAC4.170e-1144.30Endoribonuclease LACTB2 n=3 Tax=Notothenioidei Tax... [more]
UPI0014482CDC4.170e-1143.04endoribonuclease LACTB2 isoform X1 n=2 Tax=Epineph... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036388Winged helix-like DNA-binding domain superfamilyGENE3D1.10.10.10coord: 14..87
e-value: 7.4E-19
score: 69.5
IPR041516LACTB2, winged helix domainPFAMPF17778BLACT_WHcoord: 47..84
e-value: 1.9E-6
score: 27.8
NoneNo IPR availablePANTHERPTHR23131:SF0ENDORIBONUCLEASE LACTB2coord: 3..82
NoneNo IPR availablePANTHERPTHR23131METALLO-BETA-LACTAMASE RELATEDcoord: 3..82
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..49
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 50..68
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 69..95
IPR036866Ribonuclease Z/Hydroxyacylglutathione hydrolase-likeSUPERFAMILY56281Metallo-hydrolase/oxidoreductasecoord: 3..82

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig151458contigH-elongata_contig151458:50..757 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig151458.3408.1mRNA_H-elongata_contig151458.3408.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig151458 50..757 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig151458.3408.1 ID=prot_H-elongata_contig151458.3408.1|Name=mRNA_H-elongata_contig151458.3408.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=96bp
VGRLYCGHGPAVDFADDKIKFYIAHRQEREDQIVEALAEAKDRSLSSLQI
VLRVYGFLSIPLLLSAHYNVLQHLSKLCAEGKTKGGCFPCSFQSA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036388WH-like_DNA-bd_sf
IPR041516LACTB2_WH
IPR036866RibonucZ/Hydroxyglut_hydro