prot_H-elongata_contig151429.3406.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig151429.3406.1
Unique Nameprot_H-elongata_contig151429.3406.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length81
Homology
BLAST of mRNA_H-elongata_contig151429.3406.1 vs. uniprot
Match: A0A6H5KGH1_9PHAE (SSD domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KGH1_9PHAE)

HSP 1 Score: 91.7 bits (226), Expect = 8.620e-20
Identity = 46/79 (58.23%), Postives = 60/79 (75.95%), Query Frame = 0
Query:    3 CLAYLSYVIESSMNAFFRTLGRIVADNPWKTLLVALVVCIIGMSGVSMLEEESRGDKLWVPTGTRSQEDY---VSPYPP 78
            CL  +S+ IES M+AFF  LG +VA +P KT+L+ALV  +IG SG + LE+ESRGDKLWVP+GTR+ EDY   +S +PP
Sbjct:   15 CLQKMSHAIESRMHAFFSRLGELVAIHPGKTVLLALVGVLIGASGFTTLEQESRGDKLWVPSGTRASEDYATYLSFFPP 93          
BLAST of mRNA_H-elongata_contig151429.3406.1 vs. uniprot
Match: UPI00106B5848 (patched domain-containing protein 3-like n=2 Tax=Dendronephthya gigantea TaxID=151771 RepID=UPI00106B5848)

HSP 1 Score: 67.4 bits (163), Expect = 2.910e-11
Identity = 30/71 (42.25%), Postives = 47/71 (66.20%), Query Frame = 0
Query:    1 RGCLAYLSYVIESSMNAFFRTLGRIVADNPWKTLLVALVVCIIGMSGVSMLEEESRGDKLWVPTGTRSQED 71
            +G L  +S +I  ++   F  LGR V  +PW T+LV+L++C   M+G    E+ESRG+KLWVP  +++Q+D
Sbjct:   15 KGILQKISRIITGTLENIFYRLGRTVGGSPWITILVSLLLCGACMAGFLRFEQESRGEKLWVPQDSKAQDD 85          
BLAST of mRNA_H-elongata_contig151429.3406.1 vs. uniprot
Match: A0A7M6DNI2_9CNID (Uncharacterized protein n=1 Tax=Clytia hemisphaerica TaxID=252671 RepID=A0A7M6DNI2_9CNID)

HSP 1 Score: 61.6 bits (148), Expect = 3.140e-9
Identity = 31/82 (37.80%), Postives = 46/82 (56.10%), Query Frame = 0
Query:    1 RGCLAYLSYVIESSMNAFFRTLGRIVADNPWKTLLVALVVCIIGMSGVSMLEEESRGDKLWV-----PTGTRSQEDYVSPYP 77
            +GC    +  I +S+  FF  +GRIVA+NPW  +L+AL +  + M G+  L+ E+RG+K WV     P   +   D V P P
Sbjct:   35 KGCCKTFTDTINASLENFFGAIGRIVANNPWPVILIALTISGLCMVGIIELQTENRGEKNWVSQTSDPVKHKEWVDDVFPIP 116          
BLAST of mRNA_H-elongata_contig151429.3406.1 vs. uniprot
Match: A0A7M5WKM5_9CNID (Uncharacterized protein n=1 Tax=Clytia hemisphaerica TaxID=252671 RepID=A0A7M5WKM5_9CNID)

HSP 1 Score: 59.7 bits (143), Expect = 1.500e-8
Identity = 30/81 (37.04%), Postives = 46/81 (56.79%), Query Frame = 0
Query:    2 GCLAYLSYVIESSMNAFFRTLGRIVADNPWKTLLVALVVCIIGMSGVSMLEEESRGDKLWV-----PTGTRSQEDYVSPYP 77
             C   L+  I  ++  FF  +GR VA+NPWK ++++LV+ ++ M GV  L+ E+RG+K WV     P   +   D V P P
Sbjct:   35 SCCRNLTNTINGALENFFAAIGRGVANNPWKVIIISLVLSLLCMVGVLELQSENRGEKNWVSQTSDPIKHKEWIDDVFPIP 115          
BLAST of mRNA_H-elongata_contig151429.3406.1 vs. uniprot
Match: A0A7M5XCD6_9CNID (Uncharacterized protein n=1 Tax=Clytia hemisphaerica TaxID=252671 RepID=A0A7M5XCD6_9CNID)

HSP 1 Score: 55.5 bits (132), Expect = 4.660e-7
Identity = 33/80 (41.25%), Postives = 46/80 (57.50%), Query Frame = 0
Query:    2 GCLAYLSYVIESSMNAFFRTLGRIVADNPWKTLLVALVVCIIGMSGVSMLEEESRGDKLWVPTGTRSQE--DYVSP-YPP 78
            GC    +  I  ++  FF  LGR +A+NP K +L+AL V  + M GV    +E R +KLWV   ++S E  D+VS  YPP
Sbjct:   34 GCCKKCTDRIILALEDFFGGLGRTIANNPIKVILIALAVSFLCMIGVVDFYDEKRQEKLWVAADSKSLEHADWVSDRYPP 113          
BLAST of mRNA_H-elongata_contig151429.3406.1 vs. uniprot
Match: A0A813CPV7_9DINO (Ptchd3 protein n=1 Tax=Symbiodinium sp. KB8 TaxID=230985 RepID=A0A813CPV7_9DINO)

HSP 1 Score: 55.5 bits (132), Expect = 4.720e-7
Identity = 30/73 (41.10%), Postives = 45/73 (61.64%), Query Frame = 0
Query:    4 LAYLSYVIESSMNAFFRTLGRIVADNPWKTLLVALVVCIIGMSGVSMLEEESRGDKLWVPTGTRSQE--DYVS 74
            LA  + VIE  + +FF  +GR+V  +P K+L+ +++  +    G SML  E+R +K WVPTG  + E  DYVS
Sbjct:  344 LASTNTVIERVLESFFEKVGRVVGTHPIKSLVGSVLFVVACGGGFSMLTNETRPEKQWVPTGAIALEHNDYVS 416          
BLAST of mRNA_H-elongata_contig151429.3406.1 vs. uniprot
Match: A0A1X6PJZ3_PORUM (SSD domain-containing protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6PJZ3_PORUM)

HSP 1 Score: 52.8 bits (125), Expect = 4.170e-6
Identity = 28/70 (40.00%), Postives = 43/70 (61.43%), Query Frame = 0
Query:    2 GCLAYLSYVIESSMNAFFRTLGRIVADNPWKTLLVALVVCIIGMSGVSMLEEESRGDKLWVPTGTRSQED 71
            G L  ++  I++++ +FF  LG ++A  P   L+ AL++     +GV  L  ESRG+KLWVP GTR+  D
Sbjct:   56 GLLGRVTGAIDNALRSFFFRLGYLIAGRPVLFLIGALLLTGGLTAGVVRLRTESRGNKLWVPQGTRALRD 125          
BLAST of mRNA_H-elongata_contig151429.3406.1 vs. uniprot
Match: A0A812L909_9DINO (Ptchd3 protein n=5 Tax=Symbiodinium TaxID=2949 RepID=A0A812L909_9DINO)

HSP 1 Score: 52.4 bits (124), Expect = 5.680e-6
Identity = 27/66 (40.91%), Postives = 41/66 (62.12%), Query Frame = 0
Query:   10 VIESSMNAFFRTLGRIVADNPWKTLLVALVVCIIGMSGVSMLEEESRGDKLWVPTGTRSQE--DYV 73
            VIE  + +FF  +GR+V  +P K+L+ +++  +    G SML  E+R +K WVPTG  + E  DYV
Sbjct:   37 VIERVLESFFEKVGRVVGTHPIKSLVGSVLFVVACGGGFSMLTNETRPEKQWVPTGAIALEHNDYV 102          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig151429.3406.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 8
Match NameE-valueIdentityDescription
A0A6H5KGH1_9PHAE8.620e-2058.23SSD domain-containing protein n=2 Tax=Ectocarpus T... [more]
UPI00106B58482.910e-1142.25patched domain-containing protein 3-like n=2 Tax=D... [more]
A0A7M6DNI2_9CNID3.140e-937.80Uncharacterized protein n=1 Tax=Clytia hemisphaeri... [more]
A0A7M5WKM5_9CNID1.500e-837.04Uncharacterized protein n=1 Tax=Clytia hemisphaeri... [more]
A0A7M5XCD6_9CNID4.660e-741.25Uncharacterized protein n=1 Tax=Clytia hemisphaeri... [more]
A0A813CPV7_9DINO4.720e-741.10Ptchd3 protein n=1 Tax=Symbiodinium sp. KB8 TaxID=... [more]
A0A1X6PJZ3_PORUM4.170e-640.00SSD domain-containing protein n=1 Tax=Porphyra umb... [more]
A0A812L909_9DINO5.680e-640.91Ptchd3 protein n=5 Tax=Symbiodinium TaxID=2949 Rep... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..30
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 31..51
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 52..80
NoneNo IPR availableTMHMMTMhelixcoord: 34..51

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig151429contigH-elongata_contig151429:576..818 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig151429.3406.1mRNA_H-elongata_contig151429.3406.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig151429 576..818 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig151429.3406.1 ID=prot_H-elongata_contig151429.3406.1|Name=mRNA_H-elongata_contig151429.3406.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=81bp
RGCLAYLSYVIESSMNAFFRTLGRIVADNPWKTLLVALVVCIIGMSGVSM
LEEESRGDKLWVPTGTRSQEDYVSPYPPPL*
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