prot_H-elongata_contig1514.3404.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig1514.3404.1
Unique Nameprot_H-elongata_contig1514.3404.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length1792
Homology
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BLAST of mRNA_H-elongata_contig1514.3404.1 vs. uniprot
Match: D7FUY9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUY9_ECTSI)

HSP 1 Score: 173 bits (438), Expect = 1.150e-39
Identity = 203/632 (32.12%), Postives = 287/632 (45.41%), Query Frame = 0 
Query: 1182 VARRERPECMETTSTPDEEVAMLQSRLCLTGKRIATVRRETLVEEHARLLDEVDAMRKKAAEASTEAASLRRRCGQHEAAIVELAYSREEEAEACRSARTALVKERSVLAKSVRRVQELELELVCLSS-----QQQHQKQQHTSP-----------------EKGKPIISLP--------TDV-----ESASTRN----RHDHRASTESVPWATSDGDEGFADNSAELSSSVTTERKS------------RVGPREAREREKTHNAVFALEESLNAAKKESEQLKERLSWVQARLREKERRANEMKAEAASARATVDRVTAEMEMATLXXEAAMARTHVAEQKATTAKDLEEERAAAREVEVLRMTNDLREAREGRAEARGEVSRLRHALEDSDRRSAGLERKLSLSTASLRGVEDEPACALINLIEEMGEEAPRPSEGDEILSISPAREN-----------SQPMGMGSKASLANGKSFVKAFGISNLPSSPTDAADEGDTLSYKSRVVLASNGYHETTEGCERLTASQAHHQELMRVSGKAITERRENCEEGTRAAVAASTLSAACCRWHGISLGQDLTTEAAARLALMRRSFRALRVEALLRSRDRSVRRLERLQLWVVQAVDKAGEEL 1751
            VA+RE  E +E  +T + E+A+L++RL    + + + RRE L+E  AR L E +A  +KAA+A   A +L+ +C Q E  I  LA SR EEA+ACR+AR  L KERS   +S   V+EL+ E+  L+S       + ++Q++ S                  E G   +           TDV     +   TR     RH H  S       T +   G  DN   ++     +R +            RVG REA+ERE+    + ALEESL A ++E    K R   ++A LRE + R                       +A    +A                        A E EVLR T     ARE  + A+ E S LR  + + DRR   LE++L  S ASL   +    CAL+  I ++G    R  EG+  L    AR             S P   G   +  + +   +     N   +  + + E + L  KS    +++ +  TT   +RL ASQA H EL+R S  A+    + C+   R  +AA  L+AAC    G+  G++ T EAA RL L RR FRALR EAL  SRDRSVRR ERLQ W+ +A + AGEE+
Sbjct:  517 VAQREVAELVEAAATREGEIAVLRTRLRAAEEDVGSARREALLEGSARSLAETEAAGRKAAQAWAGAVALKNKCRQQEQTIAGLALSRGEEADACRAARDELEKERSSRVESEGHVRELQGEVSRLASLLGAANDEIERQRNISRDNEIGDHRRGQSGRGGGEAGGEALDRSASTQGVDDTDVCRYDGDETPTRRENQTRHHHTMSGRIEHGITPESWRGSCDNDKHVAQRRQCDRVASTCSTPVASFTDRVGTREAKERERARKTLLALEESLRAGREEVRHHKRRAERLRAALREAQERGXXXXXXXXXXXXXXXXXXXXXGLAREETDAXXXXXXXXXXXXXXXXXXXXXEVEAIEAEVLRATAAALGAREQCSVAQREASGLRETVRELDRRVILLEQQLGASIASLHAADARRVCALVGRIRDLGG---REWEGEARLEDLRARYEANNGAVGGRMLSDPAVSGPGKAAQDLQEAARTGMRLNAVGNGDNRSGESERLQGKSLRNNSASAFEVTTLR-DRLAASQAQHVELVRASEAAVAGCNQRCDAHIRVVLAAGKLTAACLLRRGVVAGREATVEAAGRLELARRCFRALREEALRASRDRSVRRQERLQRWIGEAFEGAGEEV 1144
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig1514.3404.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FUY9_ECTSI1.150e-3932.12Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 1104..1124
NoneNo IPR availableCOILSCoilCoilcoord: 1470..1490
NoneNo IPR availableCOILSCoilCoilcoord: 403..437
NoneNo IPR availableCOILSCoilCoilcoord: 1220..1254
NoneNo IPR availableCOILSCoilCoilcoord: 477..504
NoneNo IPR availableCOILSCoilCoilcoord: 632..666
NoneNo IPR availableCOILSCoilCoilcoord: 378..398
NoneNo IPR availableCOILSCoilCoilcoord: 1397..1452
NoneNo IPR availableCOILSCoilCoilcoord: 986..1006
NoneNo IPR availableCOILSCoilCoilcoord: 1290..1317
NoneNo IPR availableCOILSCoilCoilcoord: 515..542
NoneNo IPR availableCOILSCoilCoilcoord: 1141..1161
NoneNo IPR availableCOILSCoilCoilcoord: 580..600

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig1514contigH-elongata_contig1514:2161..12823 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig1514.3404.1mRNA_H-elongata_contig1514.3404.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig1514 1883..13249 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig1514.3404.1 ID=prot_H-elongata_contig1514.3404.1|Name=mRNA_H-elongata_contig1514.3404.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=1792bp
MAEASWRMNEALTAVSDPAVFQRRVLSLALSRAVECLGVPSARVRELCDE
LGISRRALWRAVRYRQVNAFCDGSEKEVNAEKYKDEETRSTDGLFTLLLQ
DMILAFFTKETLNCEQSPEGAMAGHESLWRKVVELKEARDETLQRAMLTP
EQQRLVTALVEALEEQARDEQDSSPFMEMERDILYGAQRFPVVARDPDAG
PLSVSLFLAKSKAMAGSQGFGIPPLTAGYQQSSSPIIPTSPTPQHGRRSV
TAPTLFSPKGGHRHQSRLPEESICLRHGNSGGGDLGDSFHERSEHPNVTL
RQAVGKKGAVIFANSGGARFACTDHEEKSELNRLKKEIVGLRGQRDVLAR
SFSFVREQYSDALSEKSKKIEPVQRKEVETLQRASNALRVELAAEKRRRA
EDVARLEGEAARLVREADRAARRAEDAERARATAHARLVEKDAVDTGMSE
ALEHRALALEKRSTATAAKNERLRGRLDAALGDVEEMLQSNKDLSAELDA
ARSSQEALISQKALIEEAVTEKERLAGELTDAKAQISALESDLLSLCKAN
CAADADALRRSLESGAPATAEAVDTNYGVVKEVEKEKADTKAAARKREGE
NRLVDEFDWSVDTTRGRLIEAVAPAEDWVARSRKWEDDATRLADALRKSE
EETARAREELKTVVVEVAEDLAKARGEVARMSRVRKEEAATARKTEAGLR
DELKTAQATALALQDVTLKSGASAARVSVGEKPEARYAPTATYLPRIVRE
DAQRDSARKSLLKLARLRGVLPAPNIHDGDWEEGESCSDGEGARGDEGVP
KGGTSVGGEIGGFEGRELDSGSRMKDGIGRRSAVTRGSAGLREIDFHGGR
DPCRADEVTTERSPSESKEEVAPDNSRKTSCPVDARGAGKASVAVEGGGG
GFGQGKGQSEDEQACRVRGGGGNSTPVNRRLSNRQLILSRATPEVVETAD
AVAEDATTSSLERRETEVSLEESAHEQDSTVVEEGEKRAKREADKALAEV
VALEALLLDARGDLARERAAASARQMQVPSQVGAVELERVKATLRDCRAE
LVDRSRELDALRSRDEASQQKVADTHEANETTCSVGAIVRTLKGTGGAVC
RWGKEETEDSRRAQEQEHATVETEEARARQDADGEVLVQERDALREKCAS
LESRLAEIEVRQRSKHAAKKTGAATTAAVFSVARRERPECMETTSTPDEE
VAMLQSRLCLTGKRIATVRRETLVEEHARLLDEVDAMRKKAAEASTEAAS
LRRRCGQHEAAIVELAYSREEEAEACRSARTALVKERSVLAKSVRRVQEL
ELELVCLSSQQQHQKQQHTSPEKGKPIISLPTDVESASTRNRHDHRASTE
SVPWATSDGDEGFADNSAELSSSVTTERKSRVGPREAREREKTHNAVFAL
EESLNAAKKESEQLKERLSWVQARLREKERRANEMKAEAASARATVDRVT
AEMEMATLKAEAAMARTHVAEQKATTAKDLEEERAAAREVEVLRMTNDLR
EAREGRAEARGEVSRLRHALEDSDRRSAGLERKLSLSTASLRGVEDEPAC
ALINLIEEMGEEAPRPSEGDEILSISPARENSQPMGMGSKASLANGKSFV
KAFGISNLPSSPTDAADEGDTLSYKSRVVLASNGYHETTEGCERLTASQA
HHQELMRVSGKAITERRENCEEGTRAAVAASTLSAACCRWHGISLGQDLT
TEAAARLALMRRSFRALRVEALLRSRDRSVRRLERLQLWVVQAVDKAGEE
LVPHIRRRSEGEDRALARPTTSETYAFASSEINGSNSGLPV*
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