prot_H-elongata_contig151394.3403.1 (polypeptide) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig151394.3403.1 vs. uniprot
Match: A0A6H5JCM0_9PHAE (Reverse transcriptase domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCM0_9PHAE) HSP 1 Score: 71.2 bits (173), Expect = 3.480e-12 Identity = 43/102 (42.16%), Postives = 61/102 (59.80%), Query Frame = 0
Query: 3 EGISLNRRKSALL-ANGAIREDLTEEQCIAGDSIRFTVVGQGMRVVGVPVGTEQFKWDFVNQAVNGEPA--VRALVPMNDAQAGFQILRLSAVSCLSHLLRT 101
+GI L+ KS +L G LT ++ I +V GM VVG+PVGTE+F+ +FV++ G+PA + L ++D QA +Q+LRLS V L HLLRT
Sbjct: 385 KGIELSLPKSKVLFPEGLCMSSLTNDEQQQLTKIGLSVTEGGMPVVGIPVGTEEFQRNFVSKIARGDPAELILRLATLDDPQASYQLLRLSGVPRLFHLLRT 486
BLAST of mRNA_H-elongata_contig151394.3403.1 vs. uniprot
Match: A0A6H5LN63_9PHAE (Reverse transcriptase domain-containing protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LN63_9PHAE) HSP 1 Score: 71.2 bits (173), Expect = 3.520e-12 Identity = 43/102 (42.16%), Postives = 61/102 (59.80%), Query Frame = 0
Query: 3 EGISLNRRKSALL-ANGAIREDLTEEQCIAGDSIRFTVVGQGMRVVGVPVGTEQFKWDFVNQAVNGEPA--VRALVPMNDAQAGFQILRLSAVSCLSHLLRT 101
+GI L+ KS +L G LT ++ I +V GM VVG+PVGTE+F+ +FV++ G+PA + L ++D QA +Q+LRLS V L HLLRT
Sbjct: 385 KGIELSLPKSKVLFPEGLCMSSLTNDEQQQLTKIGLSVAEGGMPVVGIPVGTEEFQRNFVSKIARGDPAELILRLATLDDPQASYQLLRLSGVPRLFHLLRT 486
BLAST of mRNA_H-elongata_contig151394.3403.1 vs. uniprot
Match: A0A6H5K1H0_9PHAE (Reverse transcriptase domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K1H0_9PHAE) HSP 1 Score: 71.2 bits (173), Expect = 3.540e-12 Identity = 43/102 (42.16%), Postives = 61/102 (59.80%), Query Frame = 0
Query: 3 EGISLNRRKSALL-ANGAIREDLTEEQCIAGDSIRFTVVGQGMRVVGVPVGTEQFKWDFVNQAVNGEPA--VRALVPMNDAQAGFQILRLSAVSCLSHLLRT 101
+GI L+ KS +L G LT ++ I +V GM VVG+PVGTE+F+ +FV++ G+PA + L ++D QA +Q+LRLS V L HLLRT
Sbjct: 233 KGIELSLPKSKVLFPEGLCMSSLTNDEQQQLTKIGLSVAEGGMPVVGIPVGTEEFQRNFVSKIARGDPAELILRLATLDDPQASYQLLRLSGVPRLFHLLRT 334
BLAST of mRNA_H-elongata_contig151394.3403.1 vs. uniprot
Match: A0A6H5L2W9_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L2W9_9PHAE) HSP 1 Score: 71.2 bits (173), Expect = 3.570e-12 Identity = 43/102 (42.16%), Postives = 61/102 (59.80%), Query Frame = 0
Query: 3 EGISLNRRKSALL-ANGAIREDLTEEQCIAGDSIRFTVVGQGMRVVGVPVGTEQFKWDFVNQAVNGEPA--VRALVPMNDAQAGFQILRLSAVSCLSHLLRT 101
+GI L+ KS +L G LT ++ I +V GM VVG+PVGTE+F+ +FV++ G+PA + L ++D QA +Q+LRLS V L HLLRT
Sbjct: 18 KGIELSLPKSKVLFPEGLCMSSLTNDEQQQLTKIGLSVAEGGMPVVGIPVGTEEFQRNFVSKIARGDPAELILRLATLDDPQASYQLLRLSGVPRLFHLLRT 119
BLAST of mRNA_H-elongata_contig151394.3403.1 vs. uniprot
Match: A0A6H5JLD7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JLD7_9PHAE) HSP 1 Score: 69.7 bits (169), Expect = 7.160e-12 Identity = 42/102 (41.18%), Postives = 60/102 (58.82%), Query Frame = 0
Query: 3 EGISLNRRKSALL-ANGAIREDLTEEQCIAGDSIRFTVVGQGMRVVGVPVGTEQFKWDFVNQAVNGEPA--VRALVPMNDAQAGFQILRLSAVSCLSHLLRT 101
+GI L+ KS +L G LT ++ I +V GM VVG+P GTE+F+ +FV++ G+PA + L ++D QA +Q+LRLS V L HLLRT
Sbjct: 51 KGIELSLPKSKVLFPEGLCMSSLTNDEQQQLTKIGLSVAEGGMPVVGIPAGTEEFQRNFVSKIARGDPAELILRLATLDDPQASYQLLRLSGVPRLFHLLRT 152
BLAST of mRNA_H-elongata_contig151394.3403.1 vs. uniprot
Match: A0A6H5KDI2_9PHAE (Uncharacterized protein (Fragment) n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KDI2_9PHAE) HSP 1 Score: 69.7 bits (169), Expect = 1.180e-11 Identity = 43/102 (42.16%), Postives = 59/102 (57.84%), Query Frame = 0
Query: 3 EGISLNRRKSALL-ANGAIREDLTEEQCIAGDSIRFTVVGQGMRVVGVPVGTEQFKWDFVNQAVNGEPA--VRALVPMNDAQAGFQILRLSAVSCLSHLLRT 101
+GI LN KS +L G LT ++ I +V GM VV +PVGTE+F+ +FV + G+PA + L ++D QA +Q+LRLS V L HLLRT
Sbjct: 51 KGIELNLPKSKVLFPEGLCMSSLTNDEQQQLTKIGLSVAEGGMPVVAIPVGTEEFQRNFVPKIARGDPAELILRLATLDDPQASYQLLRLSGVPRLFHLLRT 152
BLAST of mRNA_H-elongata_contig151394.3403.1 vs. uniprot
Match: A0A6H5K541_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K541_9PHAE) HSP 1 Score: 66.2 bits (160), Expect = 1.130e-10 Identity = 43/102 (42.16%), Postives = 56/102 (54.90%), Query Frame = 0
Query: 3 EGISLNRRKSALL-ANGAIREDLTEEQCIAGDSIRFTVVGQGMRVVGVPVGTEQFKWDFVNQAVNGEPA--VRALVPMNDAQAGFQILRLSAVSCLSHLLRT 101
+GI L+ KS +L G LT ++ +V GM +VGVPVGTE F+ FV G PA +R L ++D QA +Q+LRLS V L HLLRT
Sbjct: 84 KGIELSLPKSKVLFPEGFFFSSLTNDEQRDLTKTGLSVAEGGMAIVGVPVGTECFQRSFVTNFARGNPAELIRRLSTLDDPQASYQLLRLSGVPRLFHLLRT 185
BLAST of mRNA_H-elongata_contig151394.3403.1 vs. uniprot
Match: A0A6H5KGJ4_9PHAE (Reverse transcriptase domain-containing protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KGJ4_9PHAE) HSP 1 Score: 66.6 bits (161), Expect = 1.420e-10 Identity = 43/102 (42.16%), Postives = 56/102 (54.90%), Query Frame = 0
Query: 3 EGISLNRRKSALL-ANGAIREDLTEEQCIAGDSIRFTVVGQGMRVVGVPVGTEQFKWDFVNQAVNGEPA--VRALVPMNDAQAGFQILRLSAVSCLSHLLRT 101
+GI L+ KS +L G LT ++ +V GM +VGVPVGTE F+ FV G PA +R L ++D QA +Q+LRLS V L HLLRT
Sbjct: 385 KGIELSLPKSKVLFPEGLFFSSLTNDEQRDLTKTGLSVAEGGMAIVGVPVGTECFQRSFVTNFARGNPAELIRRLSTLDDPQASYQLLRLSGVPRLFHLLRT 486
BLAST of mRNA_H-elongata_contig151394.3403.1 vs. uniprot
Match: A0A6H5KHJ5_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KHJ5_9PHAE) HSP 1 Score: 61.2 bits (147), Expect = 3.610e-10 Identity = 33/60 (55.00%), Postives = 40/60 (66.67%), Query Frame = 0
Query: 44 MRVVGVPVGTEQFKWDFVNQAVNGEPA--VRALVPMNDAQAGFQILRLSAVSCLSHLLRT 101
M +VGVPVGTE F+ FV G PA +R L ++D QA +Q+LRLS VS L HLLRT
Sbjct: 1 MAIVGVPVGTECFQRSFVTNFARGNPAELIRRLSTLDDPQASYQLLRLSGVSRLFHLLRT 60
BLAST of mRNA_H-elongata_contig151394.3403.1 vs. uniprot
Match: A0A6H5KED8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KED8_9PHAE) HSP 1 Score: 64.7 bits (156), Expect = 4.860e-10 Identity = 36/80 (45.00%), Postives = 50/80 (62.50%), Query Frame = 0
Query: 24 LTEEQCIAGDSIRFTVVGQGMRVVGVPVGTEQFKWDFVNQAVNGEPA--VRALVPMNDAQAGFQILRLSAVSCLSHLLRT 101
LT ++ I V GM VVG+PVGTE+F+ +FV++ G+PA + L ++D QA +Q+LRLS V L HLLRT
Sbjct: 4 LTNDEQQQLTKIGLPVAEGGMSVVGIPVGTEEFQRNFVSKFAGGDPADLILRLATLDDPQASYQLLRLSGVPRLFHLLRT 83 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig151394.3403.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 14
Pagesback to topAlignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_H-elongata_contig151394.3403.1 ID=prot_H-elongata_contig151394.3403.1|Name=mRNA_H-elongata_contig151394.3403.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=107bpback to top |