prot_H-elongata_contig151236.3398.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig151236.3398.1
Unique Nameprot_H-elongata_contig151236.3398.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length56
Homology
BLAST of mRNA_H-elongata_contig151236.3398.1 vs. uniprot
Match: D8LIK8_ECTSI (Rab-GAP TBC domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LIK8_ECTSI)

HSP 1 Score: 79.7 bits (195), Expect = 4.720e-16
Identity = 33/42 (78.57%), Postives = 36/42 (85.71%), Query Frame = 0
Query:    1 EVDVAFFAVGWFQTMFLYTTRMPPDTLLWLWDAWVMERSYKA 42
            +VDV FFAVGWFQT+FLY +RMP DTLLWLWD WV ERSYK 
Sbjct: 1737 DVDVTFFAVGWFQTLFLYNSRMPSDTLLWLWDNWVTERSYKV 1778          
BLAST of mRNA_H-elongata_contig151236.3398.1 vs. uniprot
Match: A0A6H5L5V9_9PHAE (Rab-GAP TBC domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L5V9_9PHAE)

HSP 1 Score: 77.8 bits (190), Expect = 2.250e-15
Identity = 32/42 (76.19%), Postives = 36/42 (85.71%), Query Frame = 0
Query:    1 EVDVAFFAVGWFQTMFLYTTRMPPDTLLWLWDAWVMERSYKA 42
            +V+V FFAVGWFQT+FLY +RMP DTLLWLWD WV ERSYK 
Sbjct: 2036 DVNVTFFAVGWFQTLFLYNSRMPSDTLLWLWDNWVTERSYKV 2077          
BLAST of mRNA_H-elongata_contig151236.3398.1 vs. uniprot
Match: A0A7S1D5P5_CYCTE (Hypothetical protein n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1D5P5_CYCTE)

HSP 1 Score: 58.2 bits (139), Expect = 1.520e-8
Identity = 23/46 (50.00%), Postives = 33/46 (71.74%), Query Frame = 0
Query:    1 EVDVAFFAVGWFQTMFLYTTRMPPDTLLWLWDAWVMERSYKARYLI 46
            E++V  FA+GWFQT+FLY   MP  T+  LWD W++ERS+K  + +
Sbjct:  167 ELNVGLFALGWFQTLFLYLPSMPSATVCHLWDIWLVERSFKIFFRV 212          
BLAST of mRNA_H-elongata_contig151236.3398.1 vs. uniprot
Match: A0A7R9ZRK5_9STRA (Hypothetical protein n=1 Tax=Craspedostauros australis TaxID=1486917 RepID=A0A7R9ZRK5_9STRA)

HSP 1 Score: 57.4 bits (137), Expect = 1.900e-8
Identity = 22/46 (47.83%), Postives = 33/46 (71.74%), Query Frame = 0
Query:    1 EVDVAFFAVGWFQTMFLYTTRMPPDTLLWLWDAWVMERSYKARYLI 46
            E++V  FA+GWFQT+FLY   MP  T+  +WD W++ERS+K  + +
Sbjct:  113 ELNVGLFALGWFQTLFLYLPSMPSATVCHMWDIWLVERSFKIFFRV 158          
BLAST of mRNA_H-elongata_contig151236.3398.1 vs. uniprot
Match: A0A7S2U8X4_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2U8X4_9STRA)

HSP 1 Score: 57.4 bits (137), Expect = 3.330e-8
Identity = 22/46 (47.83%), Postives = 33/46 (71.74%), Query Frame = 0
Query:    1 EVDVAFFAVGWFQTMFLYTTRMPPDTLLWLWDAWVMERSYKARYLI 46
            E++V  FA+GWFQT+FLY   MP  T+  +WD W++ERS+K  + +
Sbjct:  233 ELNVGLFALGWFQTLFLYLPSMPSATVCHMWDIWLVERSFKIFFRV 278          
BLAST of mRNA_H-elongata_contig151236.3398.1 vs. uniprot
Match: A0A7S2EQW5_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2EQW5_TRICV)

HSP 1 Score: 57.4 bits (137), Expect = 3.330e-8
Identity = 22/46 (47.83%), Postives = 33/46 (71.74%), Query Frame = 0
Query:    1 EVDVAFFAVGWFQTMFLYTTRMPPDTLLWLWDAWVMERSYKARYLI 46
            E++V  FA+GWFQT+FLY   MP  T+  +WD W++ERS+K  + +
Sbjct:  231 ELNVGLFALGWFQTLFLYLPSMPSATVCHMWDIWLVERSFKIFFRV 276          
BLAST of mRNA_H-elongata_contig151236.3398.1 vs. uniprot
Match: A0A1Z5JKH4_FISSO (Rab-GAP TBC domain-containing protein n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JKH4_FISSO)

HSP 1 Score: 57.4 bits (137), Expect = 3.490e-8
Identity = 22/46 (47.83%), Postives = 33/46 (71.74%), Query Frame = 0
Query:    1 EVDVAFFAVGWFQTMFLYTTRMPPDTLLWLWDAWVMERSYKARYLI 46
            E++V  FA+GWFQT+FLY   MP  T+  +WD W++ERS+K  + +
Sbjct: 1326 ELNVGLFALGWFQTLFLYLPSMPSATVCHMWDIWLVERSFKIFFRV 1371          
BLAST of mRNA_H-elongata_contig151236.3398.1 vs. uniprot
Match: A0A1Z5J7K7_FISSO (Rab-GAP TBC domain-containing protein n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5J7K7_FISSO)

HSP 1 Score: 57.4 bits (137), Expect = 3.490e-8
Identity = 22/46 (47.83%), Postives = 33/46 (71.74%), Query Frame = 0
Query:    1 EVDVAFFAVGWFQTMFLYTTRMPPDTLLWLWDAWVMERSYKARYLI 46
            E++V  FA+GWFQT+FLY   MP  T+  +WD W++ERS+K  + +
Sbjct: 1356 ELNVGLFALGWFQTLFLYLPSMPSATVCHMWDIWLVERSFKIFFRV 1401          
BLAST of mRNA_H-elongata_contig151236.3398.1 vs. uniprot
Match: A0A7S0FSX3_9STRA (Hypothetical protein (Fragment) n=1 Tax=Minutocellus polymorphus TaxID=265543 RepID=A0A7S0FSX3_9STRA)

HSP 1 Score: 55.1 bits (131), Expect = 4.370e-8
Identity = 21/45 (46.67%), Postives = 32/45 (71.11%), Query Frame = 0
Query:    2 VDVAFFAVGWFQTMFLYTTRMPPDTLLWLWDAWVMERSYKARYLI 46
            ++V  FA+GWFQT+FLY   MP  T+  +WD W++ERS+K  + +
Sbjct:   23 LNVGIFALGWFQTLFLYLPSMPTATVCHMWDIWLVERSFKIFFRV 67          
BLAST of mRNA_H-elongata_contig151236.3398.1 vs. uniprot
Match: A0A7S1FQF6_9STRA (Hypothetical protein n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1FQF6_9STRA)

HSP 1 Score: 57.0 bits (136), Expect = 4.700e-8
Identity = 21/46 (45.65%), Postives = 33/46 (71.74%), Query Frame = 0
Query:    1 EVDVAFFAVGWFQTMFLYTTRMPPDTLLWLWDAWVMERSYKARYLI 46
            +++V  FA+GWFQT+FLY   MP  T+  +WD W++ERS+K  + +
Sbjct:  342 DLNVGLFALGWFQTLFLYIPSMPSATVCHMWDIWIVERSFKIFFRV 387          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig151236.3398.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LIK8_ECTSI4.720e-1678.57Rab-GAP TBC domain-containing protein n=1 Tax=Ecto... [more]
A0A6H5L5V9_9PHAE2.250e-1576.19Rab-GAP TBC domain-containing protein n=1 Tax=Ecto... [more]
A0A7S1D5P5_CYCTE1.520e-850.00Hypothetical protein n=1 Tax=Cyclophora tenuis Tax... [more]
A0A7R9ZRK5_9STRA1.900e-847.83Hypothetical protein n=1 Tax=Craspedostauros austr... [more]
A0A7S2U8X4_9STRA3.330e-847.83Hypothetical protein n=1 Tax=Attheya septentrional... [more]
A0A7S2EQW5_TRICV3.330e-847.83Hypothetical protein n=1 Tax=Trieres chinensis Tax... [more]
A0A1Z5JKH4_FISSO3.490e-847.83Rab-GAP TBC domain-containing protein n=1 Tax=Fist... [more]
A0A1Z5J7K7_FISSO3.490e-847.83Rab-GAP TBC domain-containing protein n=1 Tax=Fist... [more]
A0A7S0FSX3_9STRA4.370e-846.67Hypothetical protein (Fragment) n=1 Tax=Minutocell... [more]
A0A7S1FQF6_9STRA4.700e-845.65Hypothetical protein n=1 Tax=Corethron hystrix Tax... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D1.10.472.80coord: 1..45
e-value: 2.0E-5
score: 26.3
IPR035969Rab-GTPase-TBC domain superfamilySUPERFAMILY47923Ypt/Rab-GAP domain of gyp1pcoord: 2..39

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig151236contigH-elongata_contig151236:643..810 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig151236.3398.1mRNA_H-elongata_contig151236.3398.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig151236 643..810 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig151236.3398.1 ID=prot_H-elongata_contig151236.3398.1|Name=mRNA_H-elongata_contig151236.3398.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=56bp
EVDVAFFAVGWFQTMFLYTTRMPPDTLLWLWDAWVMERSYKARYLIHDTW
YGTST*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR035969Rab-GTPase_TBC_sf