prot_H-elongata_contig151039.3392.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig151039.3392.1
Unique Nameprot_H-elongata_contig151039.3392.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length286
Homology
BLAST of mRNA_H-elongata_contig151039.3392.1 vs. uniprot
Match: A0A6H5KVV7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KVV7_9PHAE)

HSP 1 Score: 100 bits (250), Expect = 1.540e-20
Identity = 82/230 (35.65%), Postives = 106/230 (46.09%), Query Frame = 0
Query:   49 IYRVAADSLQELHGVESMTAPTLEKIMALLQLGPRQLVKQGLAPRRLLQETLIASLPAPEDESDEGEERALFEVAVVLEENIGSNTLDAKQMDGDVIHEEGRSSDDNDKVKEKENEMRKKPKWKPMRPIQEALAATGIQLSPRETKTLLRALGVTPHRFVQLGLIDHMALRAKHVEKWPNVARQKRGLDR--PCRLNHNMRGPPHGPPHVQDQFGHHKHGGIGRGRSVSP 276
            +Y+  A +L+E HGV SMTA  LEK M LL+L P +LV QGLAP +LL+    A   A   +S  G   +  E     +  +  +        GD  H+  R          K N +  +   +   P+  AL A GI L PRET+ LLRALGV PHR V+LGL+    LR           R + G  R  P  L H   G P G  H   + G     G+GR R   P
Sbjct:   26 LYKATARNLREYHGVPSMTADNLEKTMVLLRLRPGRLVVQGLAPEKLLKGFSAADAHADTTDSS-GSSGSEVEPEQADDNQVSDDXXXXXXXSGDTEHDNIR----------KHNSLGFETNKRSKHPVHAALVAAGITLRPRETRPLLRALGVGPHRLVKLGLVQREELR-----------RSRPGGRRGGPSHLRHGHPGGPGGRXHXXXRGGR----GMGRPRGPPP 229          
BLAST of mRNA_H-elongata_contig151039.3392.1 vs. uniprot
Match: A0A6H5L2C8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L2C8_9PHAE)

HSP 1 Score: 59.7 bits (143), Expect = 1.190e-6
Identity = 52/166 (31.33%), Postives = 70/166 (42.17%), Query Frame = 0
Query:   66 MTAPTLEKIMALLQLGPRQLVKQGLAPRRLLQETLIA--SLPAPEDESDEGEERALFEVAVVLEENIGSNTLDAKQMDGDVIHEEGRSSDDNDKVKEKENEMRKKPKWKPMRPIQEALAATGIQLSPRETKTLLRALGVTPHRFVQLGLIDHMALRAKHVEKWPNV 229
            MTA  LEK M LLQL P +LV QGLAP++LL     A  +                       + N  S            I  +  ++ D+  ++   ++           PI     A G+QL PRET+ LLRALGV PHR V+LGL+     R       P+ 
Sbjct:    1 MTAGGLEKTMVLLQLRPGRLVAQGLAPKQLLDGKSAAGDAXXXXXXXXXXXXXXXXXXXPEQADNNPVSXXXXXXXXXXXXIEHDNIATQDSIDMEAGASKH----------PIHAVFVAAGVQLRPRETRPLLRALGVGPHRLVKLGLVQREEARRSRPGGTPST 156          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig151039.3392.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KVV7_9PHAE1.540e-2035.65Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5L2C8_9PHAE1.190e-631.33Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig151039contigH-elongata_contig151039:341..1282 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig151039.3392.1mRNA_H-elongata_contig151039.3392.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig151039 341..1282 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig151039.3392.1 ID=prot_H-elongata_contig151039.3392.1|Name=mRNA_H-elongata_contig151039.3392.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=286bp
MDNSNSSNINISSDSNDTTMNKSTNSDDNTKNNTMRPAEAKATLVPEAIY
RVAADSLQELHGVESMTAPTLEKIMALLQLGPRQLVKQGLAPRRLLQETL
IASLPAPEDESDEGEERALFEVAVVLEENIGSNTLDAKQMDGDVIHEEGR
SSDDNDKVKEKENEMRKKPKWKPMRPIQEALAATGIQLSPRETKTLLRAL
GVTPHRFVQLGLIDHMALRAKHVEKWPNVARQKRGLDRPCRLNHNMRGPP
HGPPHVQDQFGHHKHGGIGRGRSVSPLYFRDRFSRH
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