prot_H-elongata_contig15058.3372.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig15058.3372.1
Unique Nameprot_H-elongata_contig15058.3372.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length463
Homology
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BLAST of mRNA_H-elongata_contig15058.3372.1 vs. uniprot
Match: D7G501_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G501_ECTSI)

HSP 1 Score: 390 bits (1003), Expect = 9.740e-120
Identity = 241/448 (53.79%), Postives = 287/448 (64.06%), Query Frame = 0 
Query:   31 QRVRDWIHDFLSSLVRLCDDPSNAVAAAAFDAIQSALRKHPLCVTWVDGELQDFWG-EEEPRRERPWMKDDQRAESDS-----GDHKQAFQLQHLGEIVLRSALPRIRRLLRRHSQMLSARGMSAGMAAAATRACTSLLVAALRLSTSPSGKPTHHPLLEDPASADFFGARDAGDAGGISSRRNDGFGKGT--------------PRELVREWVGVRLRAVMEDAEGRDALLVESAAWATLRVLRTVVLTPLKASTAPRVAEAFLRVLRVGHVSTPRRHWPSLHAGEQETAAGAAMALLISSPSATAALAPHVIAAAERVPQPRRRLALLADVFFSLLVRTARGGRAP----RSGSGGXXXXXXXXXXXXXXXXXXXXXXGTVQRRRRGRSGVSSEGDG----GAQLLVSMLEEDWFVQLVSEASPERERRLLFREETVAALATACAQ 450
            +RVRDWIHDF SSL +LCDDPSN VAAAAF AI++ LR+HPLC T VD E++ FWG E + + E      + R    +     G HKQAF LQH+GEIVLRSALPRIRRLL R S+M+         AA A RAC S++VAALRLSTSPSGKP  +PLL++P S DF G + +    G S   ND   +G+              P++L  EW+  RL  ++E   G DALLVE+AAWATLRVL TV + PL+ S APRVAEAFLRVL  G  +TP+  WPSLHAG QE AAGAA+AL ++SPSATAALAPHV+AAAERVPQPR+RLALLADVFF LLVR  R GRAP     SGSGG                           R+ G  G  S   G    G ++L S+L+E+WF QLVS++     RRLLFREE VA L T CAQ
Sbjct:   58 ERVRDWIHDFFSSLPKLCDDPSNIVAAAAFSAIEALLREHPLCETAVDKEVRGFWGLESDVQPEGKGGVKEGRGSRGTPGGMFGGHKQAFPLQHVGEIVLRSALPRIRRLLHRQSRMVV--DGEPQTAAPAMRACASVMVAALRLSTSPSGKPIENPLLQNPTSVDFLGVKKSALGSGPSG--NDAGAEGSTGKEEEKDLDATLPPKDLAEEWLRARLGGILEGGRGGDALLVETAAWATLRVLHTVAMGPLRVSFAPRVAEAFLRVLVAGKAATPKHLWPSLHAGHQEVAAGAALALRLASPSATAALAPHVLAAAERVPQPRQRLALLADVFFLLLVRPGRNGRAPCVGGGSGSGGGERNDD---------------------RQGGEGGTGSSRTGAPREGPKMLASVLDEEWFEQLVSDSPGRSARRLLFREEAVAVLVTTCAQ 480
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig15058.3372.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7G501_ECTSI9.740e-12053.79Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig15058contigH-elongata_contig15058:373..3929 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig15058.3372.1mRNA_H-elongata_contig15058.3372.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig15058 373..3929 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig15058.3372.1 ID=prot_H-elongata_contig15058.3372.1|Name=mRNA_H-elongata_contig15058.3372.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=463bp
AACTRCWCFLDRRAFVNGAFEQGADAQRFNQRVRDWIHDFLSSLVRLCDD
PSNAVAAAAFDAIQSALRKHPLCVTWVDGELQDFWGEEEPRRERPWMKDD
QRAESDSGDHKQAFQLQHLGEIVLRSALPRIRRLLRRHSQMLSARGMSAG
MAAAATRACTSLLVAALRLSTSPSGKPTHHPLLEDPASADFFGARDAGDA
GGISSRRNDGFGKGTPRELVREWVGVRLRAVMEDAEGRDALLVESAAWAT
LRVLRTVVLTPLKASTAPRVAEAFLRVLRVGHVSTPRRHWPSLHAGEQET
AAGAAMALLISSPSATAALAPHVIAAAERVPQPRRRLALLADVFFSLLVR
TARGGRAPRSGSGGTGSGEFGSGSGSGSSGVGGGRGGTVQRRRRGRSGVS
SEGDGGAQLLVSMLEEDWFVQLVSEASPERERRLLFREETVAALATACAQ
ARNYSSIPSFLY*
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