prot_H-elongata_contig150476.3368.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig150476.3368.1
Unique Nameprot_H-elongata_contig150476.3368.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length113
Homology
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BLAST of mRNA_H-elongata_contig150476.3368.1 vs. uniprot
Match: A0A6H5KAD9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KAD9_9PHAE)

HSP 1 Score: 99.0 bits (245), Expect = 1.190e-22
Identity = 55/119 (46.22%), Postives = 71/119 (59.66%), Query Frame = 0 
Query:    5 GFLNINDPKVSGGSRTRQESDAIVSWSHRKLAYALDPGAWMLLHIGNIVVRRRAD----------GTASVVAKVEGRADEERGLDVTLSFGGEKMHRCVNLDVGFAAIAPLRLSWDIIR 113
            GFL+  D + + G   RQ+ +A VSW HR+  +  +PG W+LLHIGNI+VR  ++          G +S      G A   RG DV +SFGGE  +   NL+V FAAIAPLRLSWDI R
Sbjct:  123 GFLSTTDSQRAEG--VRQDGEASVSWIHRQEYHEDNPGGWLLLHIGNIMVRESSEAQQSAAATEGGASSATIGTGGPAVGNRGRDVAISFGGENPNWMSNLEVDFAAIAPLRLSWDIER 239
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig150476.3368.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5KAD9_9PHAE1.190e-2246.22Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig150476contigH-elongata_contig150476:1113..1451 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig150476.3368.1mRNA_H-elongata_contig150476.3368.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig150476 1113..1451 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig150476.3368.1 ID=prot_H-elongata_contig150476.3368.1|Name=mRNA_H-elongata_contig150476.3368.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=113bp
TGRRGFLNINDPKVSGGSRTRQESDAIVSWSHRKLAYALDPGAWMLLHIG
NIVVRRRADGTASVVAKVEGRADEERGLDVTLSFGGEKMHRCVNLDVGFA
AIAPLRLSWDIIR
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