prot_H-elongata_contig1498.3332.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig1498.3332.1
Unique Nameprot_H-elongata_contig1498.3332.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length266
Homology
BLAST of mRNA_H-elongata_contig1498.3332.1 vs. uniprot
Match: D8LCX6_ECTSI (EF-hand domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCX6_ECTSI)

HSP 1 Score: 386 bits (992), Expect = 2.730e-133
Identity = 207/272 (76.10%), Postives = 231/272 (84.93%), Query Frame = 0
Query:    5 SKFIRTLRQIEKEAIQAPSAKAGANPLSDKELSEIVDEFADKG-------NPDSKGEKKILYDDFVDMLVVGSPRSSAVGKDK-KLIPKRRMSMTMILPEGPVRRPRNQPPPTVHTYLNKMNAEVFDFNGDTRKQLARAMRAFSSSFARTNRRKLLRKHFLAFDVNNTGRINREQFADTV---ASEFFIDFDDRNKELLASFFFPKASMEHGRIEYETLLEIITARDVRRAYAFRQQTANEGADWDELFTGIDNTTRKRDFGGTLNLFATAY 265
            +KFIRTLRQIE EAIQAPSAKAGA PLSD+EL+E+V EF+ +G       NP S+ E K+LYDDFVDMLVV SPR    G+ K +  PKRR+SM+M+LPEGPVRR R QPPPTVH+YLNKMNAE FD++GDT KQLARAM+AFSSSFAR NRRKLLRKHFLAFDVNNT RI+R QF +TV   ASEFFIDFD RNK+LLA+FFFPK   EHGR+EYETLLEIITARDVRRA AFRQQTA EGAD+DELFTG+DNT RKRDFGGTLNLFATAY
Sbjct:    8 TKFIRTLRQIEYEAIQAPSAKAGATPLSDEELAEVVREFSAEGGDGGSNPNPGSRAENKVLYDDFVDMLVVASPRRRERGQRKARSPPKRRLSMSMVLPEGPVRRHRYQPPPTVHSYLNKMNAEEFDYHGDTNKQLARAMKAFSSSFARANRRKLLRKHFLAFDVNNTRRISRAQFVETVNEVASEFFIDFDSRNKDLLAAFFFPK---EHGRVEYETLLEIITARDVRRARAFRQQTAEEGADFDELFTGVDNTARKRDFGGTLNLFATAY 276          
BLAST of mRNA_H-elongata_contig1498.3332.1 vs. uniprot
Match: A0A6H5JLQ4_9PHAE (EF-hand domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JLQ4_9PHAE)

HSP 1 Score: 256 bits (654), Expect = 3.740e-77
Identity = 146/245 (59.59%), Postives = 161/245 (65.71%), Query Frame = 0
Query:   84 PKRRMSMTMILPEGPVRRPRNQPPPTVHTYLNKMNAEV-------------------------------------------------------------------FDFNGDTRKQLARAMRAFSSSFARTNRRKLLRKHFLAFDVNNTGRINREQFADTV---ASEFFIDFDDRNKELLASFFFPKASMEHGRIEYETLLEIITARDVRRAYAFRQQTANEGADWDELFTGIDNTTRKRDFGGTL 258
            PKRR+SM+M+LPEGPVRR R QPPPTVH+YLNKMNAE                                                                    FD++GDT KQLARAM+AFSSSFAR NRRKLLRKHFLAFDVNNT RI+R QF +TV   ASEFFIDFD RNK+LLA+FFFPK   EHGR+EYETLLEIITARDVRRA+AFRQQTA EGAD+DELFTG+DNT RKRDFGGTL
Sbjct:  418 PKRRLSMSMVLPEGPVRRHRYQPPPTVHSYLNKMNAETXHRRRPKAIRRLFGCRTDPRFLCFVYKVVDRSFQGWGGATQETEXXXXXXXXXXXXRKESGDVRAREFDYHGDTNKQLARAMKAFSSSFARANRRKLLRKHFLAFDVNNTRRISRAQFVETVNEVASEFFIDFDSRNKDLLAAFFFPK---EHGRVEYETLLEIITARDVRRAHAFRQQTAEEGADFDELFTGVDNTARKRDFGGTL 659          
BLAST of mRNA_H-elongata_contig1498.3332.1 vs. uniprot
Match: A0A7S3YGW2_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3YGW2_HETAK)

HSP 1 Score: 119 bits (297), Expect = 1.730e-29
Identity = 68/137 (49.64%), Postives = 89/137 (64.96%), Query Frame = 0
Query:  129 RKQLARAMRAFSSSFARTNRRKLLRKHFLAFDVNNTGRINREQFA---DTVASEFFIDFDDRNKELLASFFFPKASMEHGR-IEYETLLEIITARDVRRAYAFRQQTANEGADWDELFTGIDNTTRKRDFGGTLNLF 261
            R+ +  AM AFSS+FAR  R+K+LRKHF+AFD   TG++ R+ F    D VA+EFFIDFD+R+K +L  +FFP     HG  ++Y+ LL  I  RD RRA A R Q   +    + LF   D  +R+RDFGGTLNLF
Sbjct:   49 RRTVVEAMCAFSSAFARMQRKKMLRKHFMAFDTRKTGKVGRKMFEHSIDEVAAEFFIDFDERDKGVLGDYFFPS----HGSAVDYDQLLATICLRDFRRAQALRAQVLEDDDTREHLFIKND-LSRQRDFGGTLNLF 180          
BLAST of mRNA_H-elongata_contig1498.3332.1 vs. uniprot
Match: A0A7S2CTV8_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2CTV8_9STRA)

HSP 1 Score: 108 bits (270), Expect = 4.690e-23
Identity = 57/125 (45.60%), Postives = 86/125 (68.80%), Query Frame = 0
Query:  108 PTVHTYLNKMNAEVFDFNGDTRKQLARAMRAFSSSFARTNRRKLLRKHFLAFDVNNTGRINREQF---ADTVASEFFIDFDDRNKELLASFFFPKASMEHGRIEYETLLEIITARDVRRAYAFRQ 229
            PT+ TYL ++N ++    GD  KQL RAMRAFS SFART+R+KLLRK+ +++D+ NTGR+++  F    D   SE F++ D    + LASFFFP+ ++    ++YE LLE+I +RD+ +A+  R+
Sbjct:  670 PTMRTYLKEVNEQLAACGGDESKQLERAMRAFSCSFARTHRKKLLRKNMISYDLGNTGRLDKVAFLRSVDKCVSEGFVELDVEQTQRLASFFFPQPTVNF--LDYEVLLEVICSRDLGQAFEMRE 792          
BLAST of mRNA_H-elongata_contig1498.3332.1 vs. uniprot
Match: F0YC17_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YC17_AURAN)

HSP 1 Score: 89.4 bits (220), Expect = 2.060e-16
Identity = 52/138 (37.68%), Postives = 79/138 (57.25%), Query Frame = 0
Query:  108 PTVHTYLNKMNAEVFDFNGDTRKQLARAMRAFSSSFARTNRRKLLRKHFLAFDVNNTGRINREQFADTVA---SEFFIDFDDRNKELLASFFFPKASMEHGRIEYETLLEIITARDVRRAYAFRQQTANEGADWDELF 242
            PTV  YL+K+N  + D +GD +K+L   +RAFSS+F R +R+K+LRKH +AFDV+NTG  +R++F  +V     + + + D R + LL    FP       R   +TLL ++ +RDV+      Q    +  D   LF
Sbjct: 1270 PTVRNYLDKVNVTMRDCDGDVQKKLKNCLRAFSSAFGRNHRKKMLRKHLMAFDVSNTGTCHRDEFVGSVKRIIDDGYCELDTREQTLLFQHIFPHP---WTRQPTDTLLTMLVSRDVKGVMRMHQAAMKQEEDPRFLF 1404          
BLAST of mRNA_H-elongata_contig1498.3332.1 vs. uniprot
Match: A0A7S1U9B2_9STRA (Hypothetical protein n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1U9B2_9STRA)

HSP 1 Score: 55.1 bits (131), Expect = 5.410e-5
Identity = 36/97 (37.11%), Postives = 51/97 (52.58%), Query Frame = 0
Query:  135 AMRAFSSSFARTNRRKLLRKHFLAFDVNNTGRINREQF---ADTVASEFFIDFDDRNKELLASFFFPKASMEHGRIEYETLLEIITARDVRRAYAFR 228
            +M  F+S FAR +R++ LRKH +A+DV+ TGR+ R +    A  VA E   D +    E + SFFFP    E   +  +  L     RD+  A A R
Sbjct:  428 SMTVFASLFARADRKRFLRKHLMAYDVDRTGRMKRSELVSAAQHVADECDFDLNFATLEPMLSFFFPDT--EAWELPLDDTLNAAFKRDMDAAAALR 522          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig1498.3332.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
D8LCX6_ECTSI2.730e-13376.10EF-hand domain-containing protein n=1 Tax=Ectocarp... [more]
A0A6H5JLQ4_9PHAE3.740e-7759.59EF-hand domain-containing protein n=1 Tax=Ectocarp... [more]
A0A7S3YGW2_HETAK1.730e-2949.64Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A7S2CTV8_9STRA4.690e-2345.60Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
F0YC17_AURAN2.060e-1637.68Uncharacterized protein n=1 Tax=Aureococcus anopha... [more]
A0A7S1U9B2_9STRA5.410e-537.11Hypothetical protein n=2 Tax=Phaeomonas parva TaxI... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002048EF-hand domainPROSITEPS50222EF_HAND_2coord: 147..182
score: 9.018
IPR011992EF-hand domain pairSUPERFAMILY47473EF-handcoord: 14..217

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig1498contigH-elongata_contig1498:7616..13211 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig1498.3332.1mRNA_H-elongata_contig1498.3332.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig1498 7616..13217 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig1498.3332.1 ID=prot_H-elongata_contig1498.3332.1|Name=mRNA_H-elongata_contig1498.3332.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=266bp
MMLKSKFIRTLRQIEKEAIQAPSAKAGANPLSDKELSEIVDEFADKGNPD
SKGEKKILYDDFVDMLVVGSPRSSAVGKDKKLIPKRRMSMTMILPEGPVR
RPRNQPPPTVHTYLNKMNAEVFDFNGDTRKQLARAMRAFSSSFARTNRRK
LLRKHFLAFDVNNTGRINREQFADTVASEFFIDFDDRNKELLASFFFPKA
SMEHGRIEYETLLEIITARDVRRAYAFRQQTANEGADWDELFTGIDNTTR
KRDFGGTLNLFATAY*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002048EF_hand_dom
IPR011992EF-hand-dom_pair