prot_H-elongata_contig149682.3322.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig149682.3322.1
Unique Nameprot_H-elongata_contig149682.3322.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length235
Homology
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BLAST of mRNA_H-elongata_contig149682.3322.1 vs. uniprot
Match: A0A6H5L5B7_9PHAE (Dymeclin n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L5B7_9PHAE)

HSP 1 Score: 89.7 bits (221), Expect = 6.980e-17
Identity = 55/104 (52.88%), Postives = 59/104 (56.73%), Query Frame = 0 
Query:  131 VEGFADVQLEGVGLLLVLLGTQAYGPRPHPPPDQKHHHSSVHTGPRPAPGLDNVFLDALLREAGVNRRVGSVGEGTRNRGWGAALPRAALGWFIRRSAAPPGSA 234
            VEGF+D+QLE VGLLLVLLGTQAYGP    PP                  +DNVFLDAL                 R  GWG ALPRA LGWF+RR AAPPGSA
Sbjct:  257 VEGFSDLQLEAVGLLLVLLGTQAYGP----PPPTWGSSPGRXXXXXXXXXVDNVFLDALXXXXXXXXXXXXX----RPHGWGCALPRAVLGWFVRRPAAPPGSA 352
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BLAST of mRNA_H-elongata_contig149682.3322.1 vs. uniprot
Match: D8LKU1_ECTSI (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKU1_ECTSI)

HSP 1 Score: 67.8 bits (164), Expect = 4.880e-10
Identity = 47/120 (39.17%), Postives = 52/120 (43.33%), Query Frame = 0 
Query:  128 ISAVEGFADVQLEGVGLLLVLLGTQAYGPRPHPPPDQKHHHSSVHTGPRPA-------------PGLDNVFLDALLREAGVNRRVGSVGEGTRNRGWGAALPRAALGWFIRRSAAPPGSA 234
            + +VEGF+D+QLE VGLLLVLLGTQAYGP                 G  P                                          R  GWG ALPRA LGWF+RR AAPPGSA
Sbjct:  126 VLSVEGFSDLQLEAVGLLLVLLGTQAYGP------------PXXTWGSXPGRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRPHGWGCALPRAVLGWFVRRPAAPPGSA 233
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig149682.3322.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5L5B7_9PHAE6.980e-1752.88Dymeclin n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID... [more]
D8LKU1_ECTSI4.880e-1039.17Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig149682contigH-elongata_contig149682:235..1438 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig149682.3322.1mRNA_H-elongata_contig149682.3322.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig149682 235..1438 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig149682.3322.1 ID=prot_H-elongata_contig149682.3322.1|Name=mRNA_H-elongata_contig149682.3322.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=235bp
MVANLDASQLRSQVYSRGKLKNSGHSGNGSGVHRGRAFHNGGEYRYHTAT
VTVPGANVVVTTGGGSGGGRVGGVSTIGITEGVEEAEHAVLAPSGMGRTR
VADDPIVALLAALVSLLCAAEERGRESISAVEGFADVQLEGVGLLLVLLG
TQAYGPRPHPPPDQKHHHSSVHTGPRPAPGLDNVFLDALLREAGVNRRVG
SVGEGTRNRGWGAALPRAALGWFIRRSAAPPGSAA
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