prot_H-elongata_contig149327.3305.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig149327.3305.1
Unique Nameprot_H-elongata_contig149327.3305.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length50
Homology
BLAST of mRNA_H-elongata_contig149327.3305.1 vs. uniprot
Match: A0A6H5L6G0_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L6G0_9PHAE)

HSP 1 Score: 72.0 bits (175), Expect = 1.700e-13
Identity = 28/42 (66.67%), Postives = 34/42 (80.95%), Query Frame = 0
Query:    6 FKWYSQFFYDISKMGLQKGFGDPCPMHTEYLEYGRDEGLFDF 47
            FKWY++FFYDIS   L+  F DPCPMHTEYL YG+D+G+F F
Sbjct:  359 FKWYNEFFYDISNTALKAKFDDPCPMHTEYLNYGKDKGIFTF 400          
BLAST of mRNA_H-elongata_contig149327.3305.1 vs. uniprot
Match: A0A7S4C1M6_CHRCT (Hypothetical protein n=1 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4C1M6_CHRCT)

HSP 1 Score: 54.3 bits (129), Expect = 3.210e-7
Identity = 22/42 (52.38%), Postives = 29/42 (69.05%), Query Frame = 0
Query:    6 FKWYSQFFYDISKMGLQKGFGDPCPMHTEYLEYGRDEGLFDF 47
            F+W + +FY  +K+  + GF D  PMHTEYL YGR+ GLF F
Sbjct:  318 FEWRNGWFYRYTKLAQKNGFPDATPMHTEYLRYGRENGLFTF 359          
BLAST of mRNA_H-elongata_contig149327.3305.1 vs. uniprot
Match: A0A6U2BD26_HEMAN (Hypothetical protein n=2 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A6U2BD26_HEMAN)

HSP 1 Score: 53.1 bits (126), Expect = 8.280e-7
Identity = 21/38 (55.26%), Postives = 27/38 (71.05%), Query Frame = 0
Query:    6 FKWYSQFFYDISKMGLQKGFGDPCPMHTEYLEYGRDEG 43
            FKW +   Y ISK  +  GF DPC MH+EYL+YG+D+G
Sbjct:  341 FKWRNGVIYAISKQAMDIGFDDPCSMHSEYLQYGKDKG 378          
BLAST of mRNA_H-elongata_contig149327.3305.1 vs. uniprot
Match: A0A1X6NIV9_PORUM (Uncharacterized protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6NIV9_PORUM)

HSP 1 Score: 50.1 bits (118), Expect = 6.380e-6
Identity = 20/42 (47.62%), Postives = 29/42 (69.05%), Query Frame = 0
Query:    6 FKWYSQFFYDISKMGLQKGFGDPCPMHTEYLEYGRDEGLFDF 47
            F+W + +FY  S +  +KGF DP PMHT++LE G+  GL D+
Sbjct:  157 FEWRNGYFYRYSMLAREKGFPDPTPMHTDWLEEGKKMGLIDW 198          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig149327.3305.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A6H5L6G0_9PHAE1.700e-1366.67Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A7S4C1M6_CHRCT3.210e-752.38Hypothetical protein n=1 Tax=Chrysotila carterae T... [more]
A0A6U2BD26_HEMAN8.280e-755.26Hypothetical protein n=2 Tax=Hemiselmis andersenii... [more]
A0A1X6NIV9_PORUM6.380e-647.62Uncharacterized protein n=1 Tax=Porphyra umbilical... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig149327contigH-elongata_contig149327:133..282 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig149327.3305.1mRNA_H-elongata_contig149327.3305.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig149327 118..282 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig149327.3305.1 ID=prot_H-elongata_contig149327.3305.1|Name=mRNA_H-elongata_contig149327.3305.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=50bp
MNEFRFKWYSQFFYDISKMGLQKGFGDPCPMHTEYLEYGRDEGLFDFKF*
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