prot_H-elongata_contig14925.3297.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig14925.3297.1
Unique Nameprot_H-elongata_contig14925.3297.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length395
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig14925.3297.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR008615FNIPPFAMPF05725FNIPcoord: 315..357
e-value: 2.2E-6
score: 27.7
coord: 248..291
e-value: 5.1E-6
score: 26.6
coord: 160..202
e-value: 1.3E-8
score: 34.9
coord: 104..134
e-value: 2.4E-5
score: 24.4
coord: 204..244
e-value: 2.5E-8
score: 34.0
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10coord: 86..292
e-value: 7.4E-7
score: 29.9
NoneNo IPR availablePANTHERPTHR32134:SF91FNIP REPEAT-CONTAINING PROTEIN-RELATEDcoord: 86..274
NoneNo IPR availablePANTHERPTHR32134UNCHARACTERIZEDcoord: 86..274
NoneNo IPR availablePANTHERPTHR32134:SF91FNIP REPEAT-CONTAINING PROTEIN-RELATEDcoord: 214..394
NoneNo IPR availablePANTHERPTHR32134UNCHARACTERIZEDcoord: 214..394
NoneNo IPR availableSUPERFAMILY52058L domain-likecoord: 97..378

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig14925contigH-elongata_contig14925:2213..3397 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig14925.3297.1mRNA_H-elongata_contig14925.3297.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig14925 2213..3397 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig14925.3297.1 ID=prot_H-elongata_contig14925.3297.1|Name=mRNA_H-elongata_contig14925.3297.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=395bp
LEALLVALESARGGKRWYVPASPLQVVCFSLCVACREHFQWQVVITTDFQ
RRLWTNKRFRLHQGDTKSSRIPEARVRSMTWDVVLTKETFLSESDRLIDF
FEWPASLQELTFGWYFNRPIKSISWPTSLKLLTFFGYFDKPIEGVLWPES
LRQLRFSMRFNKPINRVVWPASLEHLIFGRCFDQPIDGIIWPASLKQLAF
GDCFNHPINNVKWPASLEKLTFGDRFNQPIDNVVWPESLPELSFPWSFNQ
TIDNNVTWPMSLRRLTFGRSFNNKIDGTTWPSSLQRLTLGTYFDRPIDTV
LWPVSLQKLTFGWKFNQPIEGVVWPISLQQLTFGTCFNQPVKYVLWPESL
QQLTFGTCFDQPIDMVIWPSSLRKMTFGWEFNQLIENVVWPESLR
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR008615FNIP
IPR032675LRR_dom_sf