prot_H-elongata_contig148991.3289.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig148991.3289.1
Unique Nameprot_H-elongata_contig148991.3289.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length52
Homology
BLAST of mRNA_H-elongata_contig148991.3289.1 vs. uniprot
Match: A0A6H5KVK8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KVK8_9PHAE)

HSP 1 Score: 74.7 bits (182), Expect = 2.280e-14
Identity = 35/48 (72.92%), Postives = 42/48 (87.50%), Query Frame = 0
Query:    1 MSPDVAGVTFLAFGNGAPDVFSSFVAMTSSNDRASALMVGLGLLLGAS 48
            M P+VAGVTFLAFGNGAPDVFS+FVA+TSS DR   L+VG+G LLG++
Sbjct:    7 MPPEVAGVTFLAFGNGAPDVFSAFVALTSSTDREDGLLVGMGSLLGST 54          
BLAST of mRNA_H-elongata_contig148991.3289.1 vs. uniprot
Match: D7G0Z1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0Z1_ECTSI)

HSP 1 Score: 73.9 bits (180), Expect = 4.250e-14
Identity = 35/48 (72.92%), Postives = 42/48 (87.50%), Query Frame = 0
Query:    1 MSPDVAGVTFLAFGNGAPDVFSSFVAMTSSNDRASALMVGLGLLLGAS 48
            M P+VAGVTFLAFGNGAPDVFS+FVA+TSS DR   L+VG+G LLG++
Sbjct:   48 MPPEVAGVTFLAFGNGAPDVFSAFVALTSSADREDGLLVGMGSLLGST 95          
BLAST of mRNA_H-elongata_contig148991.3289.1 vs. uniprot
Match: A0A835ZHX1_9STRA (Sodium/calcium exchanger protein-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZHX1_9STRA)

HSP 1 Score: 67.0 bits (162), Expect = 1.170e-11
Identity = 34/51 (66.67%), Postives = 41/51 (80.39%), Query Frame = 0
Query:    1 MSPDVAGVTFLAFGNGAPDVFSSFVAMTSSNDRASALMVGLGLLLGASEFV 51
            +SP+VAGVTFLAFGNGAPDVFSS  A+T  N  A  L+VG+G LLGA+ F+
Sbjct:   44 LSPEVAGVTFLAFGNGAPDVFSSIAAVTGPNG-AENLLVGVGALLGAAMFI 93          
BLAST of mRNA_H-elongata_contig148991.3289.1 vs. uniprot
Match: UPI001454E79B (mitochondrial sodium/calcium exchanger protein-like n=1 Tax=Asterias rubens TaxID=7604 RepID=UPI001454E79B)

HSP 1 Score: 58.9 bits (141), Expect = 8.300e-9
Identity = 30/51 (58.82%), Postives = 39/51 (76.47%), Query Frame = 0
Query:    1 MSPDVAGVTFLAFGNGAPDVFSSFVAMTSSNDRASALMVGLGLLLGASEFV 51
            +S +VAGVTFLAFGNGAPDV S+ VA+T+SND  + L +G   L GA+ F+
Sbjct:  131 LSDNVAGVTFLAFGNGAPDVISAIVAITNSNDGDAGLAIGA--LFGAAVFI 179          
BLAST of mRNA_H-elongata_contig148991.3289.1 vs. uniprot
Match: A0A6P8H7L4_ACTTE (LOW QUALITY PROTEIN: mitochondrial sodium/calcium exchanger protein-like n=1 Tax=Actinia tenebrosa TaxID=6105 RepID=A0A6P8H7L4_ACTTE)

HSP 1 Score: 58.9 bits (141), Expect = 8.310e-9
Identity = 29/51 (56.86%), Postives = 36/51 (70.59%), Query Frame = 0
Query:    1 MSPDVAGVTFLAFGNGAPDVFSSFVAMTSSNDRASALMVGLGLLLGASEFV 51
            MS +VAGVTFLA+GNGAPD+FS+  A T S+   SA  +G+  L GA  FV
Sbjct:  150 MSQNVAGVTFLAYGNGAPDIFSAIAAFTHSDKENSAAELGIQALFGAGVFV 200          
BLAST of mRNA_H-elongata_contig148991.3289.1 vs. uniprot
Match: A0A3P8ISJ7_9TREM (Na_Ca_ex domain-containing protein n=2 Tax=Schistosoma margrebowiei TaxID=48269 RepID=A0A3P8ISJ7_9TREM)

HSP 1 Score: 54.7 bits (130), Expect = 9.370e-9
Identity = 28/51 (54.90%), Postives = 36/51 (70.59%), Query Frame = 0
Query:    1 MSPDVAGVTFLAFGNGAPDVFSSFVAMTSSNDRASALMVGLGLLLGASEFV 51
            MS ++AGVT LAFGNGAPDVFS+  A+T+ +  A    +GLG LLG   F+
Sbjct:    7 MSQNLAGVTLLAFGNGAPDVFSAVTAITTGDPDAPDEGLGLGFLLGKYIFI 57          
BLAST of mRNA_H-elongata_contig148991.3289.1 vs. uniprot
Match: A0A8B7XNN8_ACAPL (mitochondrial sodium/calcium exchanger protein-like n=1 Tax=Acanthaster planci TaxID=133434 RepID=A0A8B7XNN8_ACAPL)

HSP 1 Score: 58.5 bits (140), Expect = 1.140e-8
Identity = 30/51 (58.82%), Postives = 39/51 (76.47%), Query Frame = 0
Query:    1 MSPDVAGVTFLAFGNGAPDVFSSFVAMTSSNDRASALMVGLGLLLGASEFV 51
            +S +VAGVTFLAFGNGAPDVFS+ VA+T+S D  + L +G   L GA+ F+
Sbjct:  134 LSDNVAGVTFLAFGNGAPDVFSAVVAITNSKDGDAGLAIGA--LFGAAVFI 182          
BLAST of mRNA_H-elongata_contig148991.3289.1 vs. uniprot
Match: UPI000A2A457A (mitochondrial sodium/calcium exchanger protein isoform X1 n=2 Tax=Exaiptasia diaphana TaxID=2652724 RepID=UPI000A2A457A)

HSP 1 Score: 57.4 bits (137), Expect = 2.900e-8
Identity = 29/51 (56.86%), Postives = 36/51 (70.59%), Query Frame = 0
Query:    1 MSPDVAGVTFLAFGNGAPDVFSSFVAMTSSNDRASALMVGLGLLLGASEFV 51
            MS +VAGVTFLA+GNGAPD+FS+  A + S    SA  +G+  LLGA  FV
Sbjct:  138 MSQNVAGVTFLAYGNGAPDIFSTIAAFSHSQGDNSAAELGIEALLGAGIFV 188          
BLAST of mRNA_H-elongata_contig148991.3289.1 vs. uniprot
Match: A0A0R3T9Q4_RODNA (Na_Ca_ex domain-containing protein n=1 Tax=Rodentolepis nana TaxID=102285 RepID=A0A0R3T9Q4_RODNA)

HSP 1 Score: 56.2 bits (134), Expect = 7.330e-8
Identity = 28/51 (54.90%), Postives = 36/51 (70.59%), Query Frame = 0
Query:    1 MSPDVAGVTFLAFGNGAPDVFSSFVAMTSSNDRASALMVGLGLLLGASEFV 51
            MS ++AGVT LAFGNGAPDVFS+  A+T+ N  A    +GLG L+G+   V
Sbjct:  165 MSQNLAGVTLLAFGNGAPDVFSAVTAITTGNPEAPDEGLGLGFLMGSGLLV 215          
BLAST of mRNA_H-elongata_contig148991.3289.1 vs. uniprot
Match: A0A0D0CJW0_9AGAR (Uncharacterized protein n=1 Tax=Gymnopus luxurians FD-317 M1 TaxID=944289 RepID=A0A0D0CJW0_9AGAR)

HSP 1 Score: 56.2 bits (134), Expect = 7.450e-8
Identity = 29/51 (56.86%), Postives = 38/51 (74.51%), Query Frame = 0
Query:    1 MSPDVAGVTFLAFGNGAPDVFSSFVAMTSSNDRASALMVGLGLLLGASEFV 51
            +  DVAGVTFLAFGNG+PDVFS+F AM     RA++  + +G LLGA+ F+
Sbjct:  134 LDEDVAGVTFLAFGNGSPDVFSTFSAM-----RANSGSLAIGELLGAASFI 179          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig148991.3289.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KVK8_9PHAE2.280e-1472.92Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G0Z1_ECTSI4.250e-1472.92Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A835ZHX1_9STRA1.170e-1166.67Sodium/calcium exchanger protein-domain-containing... [more]
UPI001454E79B8.300e-958.82mitochondrial sodium/calcium exchanger protein-lik... [more]
A0A6P8H7L4_ACTTE8.310e-956.86LOW QUALITY PROTEIN: mitochondrial sodium/calcium ... [more]
A0A3P8ISJ7_9TREM9.370e-954.90Na_Ca_ex domain-containing protein n=2 Tax=Schisto... [more]
A0A8B7XNN8_ACAPL1.140e-858.82mitochondrial sodium/calcium exchanger protein-lik... [more]
UPI000A2A457A2.900e-856.86mitochondrial sodium/calcium exchanger protein iso... [more]
A0A0R3T9Q4_RODNA7.330e-854.90Na_Ca_ex domain-containing protein n=1 Tax=Rodento... [more]
A0A0D0CJW0_9AGAR7.450e-856.86Uncharacterized protein n=1 Tax=Gymnopus luxurians... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR004837Sodium/calcium exchanger membrane regionPFAMPF01699Na_Ca_excoord: 2..47
e-value: 4.3E-7
score: 30.0
NoneNo IPR availablePANTHERPTHR12266NA+/CA2+ K+ INDEPENDENT EXCHANGERcoord: 1..51

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig148991contigH-elongata_contig148991:552..707 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig148991.3289.1mRNA_H-elongata_contig148991.3289.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig148991 552..719 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig148991.3289.1 ID=prot_H-elongata_contig148991.3289.1|Name=mRNA_H-elongata_contig148991.3289.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=52bp
MSPDVAGVTFLAFGNGAPDVFSSFVAMTSSNDRASALMVGLGLLLGASEF
V*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR004837NaCa_Exmemb