prot_H-elongata_contig14897.3277.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig14897.3277.1
Unique Nameprot_H-elongata_contig14897.3277.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length178
Homology
[Close]
BLAST of mRNA_H-elongata_contig14897.3277.1 vs. uniprot
Match: A0A2R4QPS4_9PHAE (Hypothetical chloroplast protein 37 n=3 Tax=Fucaceae TaxID=3010 RepID=A0A2R4QPS4_9PHAE)

HSP 1 Score: 261 bits (666), Expect = 1.130e-86
Identity = 133/176 (75.57%), Postives = 156/176 (88.64%), Query Frame = 0 
Query:    1 MNSIFPLIYSIGLFCFLAFISYFLLKQIINTQDFEKKIFKLQTLIKKNEDSYELYYKLGQLYLKKKLFSKAILLFRKAIKNWDINDRIGLGSLYNTIGFTYFTLKEYNLSIYYYKIAIKILPDYTIALINLGYAYEKQNLLLESYNFYNKVLLYNNRNSLALKRIKAIQRLLNIES 176
            MNS+FPL+YS  LFC L  IS+F++KQI+NTQ  E+K+F+LQ +IKKN+ S+ELYYKLGQLYLKKKLFSK+ILLFR+AIKNWDIND IGL SLYN+IGFTYFTLKEYNL+IYYYKIA+KI+PDY +ALIN+GYAYEKQNLLLESYN YNKVL YN  NSL LKRIK ++RLL  +S
Sbjct:    1 MNSLFPLLYSALLFCLLLLISFFIVKQILNTQGLERKMFELQIMIKKNDGSHELYYKLGQLYLKKKLFSKSILLFREAIKNWDINDNIGLASLYNSIGFTYFTLKEYNLAIYYYKIALKIIPDYIVALINIGYAYEKQNLLLESYNSYNKVLFYNAYNSLVLKRIKIVKRLLMSKS 176
[Close]
BLAST of mRNA_H-elongata_contig14897.3277.1 vs. uniprot
Match: A0A1L2F1S0_9PHAE (Ycf37 n=1 Tax=Coccophora langsdorfii TaxID=74099 RepID=A0A1L2F1S0_9PHAE)

HSP 1 Score: 255 bits (652), Expect = 1.480e-84
Identity = 132/175 (75.43%), Postives = 149/175 (85.14%), Query Frame = 0 
Query:    1 MNSIFPLIYSIGLFCFLAFISYFLLKQIINTQDFEKKIFKLQTLIKKNEDSYELYYKLGQLYLKKKLFSKAILLFRKAIKNWDINDRIGLGSLYNTIGFTYFTLKEYNLSIYYYKIAIKILPDYTIALINLGYAYEKQNLLLESYNFYNKVLLYNNRNSLALKRIKAIQRLLNIE 175
            M S+FPLIYSI LFCFL  I  F++KQ+I+TQ  EKK F+LQ LIKK+  SYE+YYKLGQLYLKKKLF KAIL+FRKAI NWDIND IGLG LYN IGFTYFTLKEYNL+IYYYKI++KI+PDYTIALINL Y YEKQN LL+SYN YNKVL +NN N+LALKRIK I RLL I+
Sbjct:    1 MTSLFPLIYSITLFCFLILIISFIIKQVIDTQKLEKKTFELQLLIKKDNTSYEVYYKLGQLYLKKKLFPKAILVFRKAINNWDINDNIGLGHLYNIIGFTYFTLKEYNLAIYYYKISLKIIPDYTIALINLAYVYEKQNFLLDSYNSYNKVLYFNNNNNLALKRIKIISRLLKID 175
[Close]
BLAST of mRNA_H-elongata_contig14897.3277.1 vs. uniprot
Match: A0A141BSA4_9PHAE (Ycf37 n=12 Tax=Sargassum TaxID=3015 RepID=A0A141BSA4_9PHAE)

HSP 1 Score: 249 bits (637), Expect = 2.850e-82
Identity = 127/172 (73.84%), Postives = 147/172 (85.47%), Query Frame = 0 
Query:    1 MNSIFPLIYSIGLFCFLAFISYFLLKQIINTQDFEKKIFKLQTLIKKNEDSYELYYKLGQLYLKKKLFSKAILLFRKAIKNWDINDRIGLGSLYNTIGFTYFTLKEYNLSIYYYKIAIKILPDYTIALINLGYAYEKQNLLLESYNFYNKVLLYNNRNSLALKRIKAIQRLL 172
            M S+FPLIYSI LFCFL  I +F++KQ+I+TQ  EKK F+LQTL+K+N  SYE YYKLG+LYLKKKLF KAILLFRKAI NWDIND IGLG +YN IG TYFTLKEYN +IYYYKIA+ I+PDYTIALINL Y YEKQNLLL+SYN+YNKVL YN  ++LALK+IK I+RLL
Sbjct:    1 MTSLFPLIYSITLFCFLILIIFFIIKQVIDTQKLEKKTFELQTLLKRNNTSYESYYKLGKLYLKKKLFLKAILLFRKAINNWDINDNIGLGHVYNVIGLTYFTLKEYNFAIYYYKIALTIIPDYTIALINLAYVYEKQNLLLDSYNYYNKVLYYNKNSNLALKKIKKIRRLL 172
[Close]
BLAST of mRNA_H-elongata_contig14897.3277.1 vs. uniprot
Match: A0A0S0GMY7_COSCS (Uncharacterized protein n=26 Tax=Laminariales TaxID=2886 RepID=A0A0S0GMY7_COSCS)

HSP 1 Score: 220 bits (561), Expect = 1.200e-70
Identity = 115/172 (66.86%), Postives = 141/172 (81.98%), Query Frame = 0 
Query:    1 MNSIFPLIYSIGLFCFLAFISYFLLKQIINTQDFEKKIFKLQTLIKKNEDSYELYYKLGQLYLKKKLFSKAILLFRKAIKNWDINDRIGLGSLYNTIGFTYFTLKEYNLSIYYYKIAIKILPDYTIALINLGYAYEKQNLLLESYNFYNKVLLYNNRNSLALKRIKAIQRLL 172
            MNS+FPL+YSI LF FL  IS+++LKQI NTQ  EKKIFKLQ  IKK+  SYE +YKLGQLYLKKKLF KAILLFR+A+K W+ ND+IGLGSLYNTIGFTYFTLK+Y+L+ YYY IAI+I+PDYT+AL NLGY+YEK NL +ESYN Y   L+++ +N LA  RI  +++ L
Sbjct:    1 MNSLFPLVYSIALFVFLFVISFYILKQITNTQKLEKKIFKLQESIKKDNVSYETFYKLGQLYLKKKLFYKAILLFRQALKAWNPNDKIGLGSLYNTIGFTYFTLKQYSLANYYYSIAIEIIPDYTLALTNLGYSYEKLNLSVESYNCYKNALVWDPQNKLASSRILVVEKKL 172
[Close]
BLAST of mRNA_H-elongata_contig14897.3277.1 vs. uniprot
Match: A0A8F0FAZ0_9PHAE (Uncharacterized protein n=1 Tax=Desmarestia aculeata TaxID=62298 RepID=A0A8F0FAZ0_9PHAE)

HSP 1 Score: 214 bits (546), Expect = 2.070e-68
Identity = 112/170 (65.88%), Postives = 136/170 (80.00%), Query Frame = 0 
Query:    1 MNSIFPLIYSIGLFCFLAFISYFLLKQIINTQDFEKKIFKLQTLIKKNEDSYELYYKLGQLYLKKKLFSKAILLFRKAIKNWDINDRIGLGSLYNTIGFTYFTLKEYNLSIYYYKIAIKILPDYTIALINLGYAYEKQNLLLESYNFYNKVLLYNNRNSLALKRIKAIQR 170
            MNS FPLIYSI LF  L  IS++L+KQI+NTQ  EKKI  LQ  IK ++ SYE++YKLGQLYLKKKLF KAILLFR+A+K W+ ND+I LGSLYNTIGFTYF LK+Y+L+IYYYKIAIKI+PDYT+AL NL YAYEK NL  E+Y+ Y   L++N +N LA  RI  ++R
Sbjct:    1 MNSFFPLIYSITLFFILFIISFYLIKQIVNTQKVEKKIIDLQDSIKTDKASYEIFYKLGQLYLKKKLFYKAILLFRRALKTWNTNDKIALGSLYNTIGFTYFELKQYDLAIYYYKIAIKIIPDYTLALTNLAYAYEKMNLYSEAYDCYKTTLVWNPKNELASSRILTVKR 170
[Close]
BLAST of mRNA_H-elongata_contig14897.3277.1 vs. uniprot
Match: A0A8F0F7S5_9PHAE (Uncharacterized protein n=1 Tax=Pseudochorda nagaii TaxID=74379 RepID=A0A8F0F7S5_9PHAE)

HSP 1 Score: 214 bits (544), Expect = 4.310e-68
Identity = 111/172 (64.53%), Postives = 136/172 (79.07%), Query Frame = 0 
Query:    1 MNSIFPLIYSIGLFCFLAFISYFLLKQIINTQDFEKKIFKLQTLIKKNEDSYELYYKLGQLYLKKKLFSKAILLFRKAIKNWDINDRIGLGSLYNTIGFTYFTLKEYNLSIYYYKIAIKILPDYTIALINLGYAYEKQNLLLESYNFYNKVLLYNNRNSLALKRIKAIQRLL 172
            MNS+FPL+YS  LF FL+ IS++++KQI NTQ  EKKIF LQ  +KKN+ SYE  Y+LGQLYLKKKLF KAILLFRKA+K WD ND+IGLGSLYNTIGFTYFTLK+Y L+ YYY IAI I+PDYT+AL NLGY YEK +L +E+YN Y   L+++ +N LA  RI   ++ L
Sbjct:    1 MNSLFPLVYSAALFIFLSVISFYIIKQISNTQKVEKKIFVLQEAVKKNDASYESLYELGQLYLKKKLFYKAILLFRKALKTWDTNDKIGLGSLYNTIGFTYFTLKQYKLASYYYNIAITIIPDYTLALTNLGYTYEKLDLTVEAYNCYKDTLVWDPKNELAALRILITEKRL 172
[Close]
BLAST of mRNA_H-elongata_contig14897.3277.1 vs. uniprot
Match: A0A8F0F9I7_9PHAE (Uncharacterized protein n=1 Tax=Chorda asiatica TaxID=1281577 RepID=A0A8F0F9I7_9PHAE)

HSP 1 Score: 209 bits (531), Expect = 3.950e-66
Identity = 111/170 (65.29%), Postives = 134/170 (78.82%), Query Frame = 0 
Query:    1 MNSIFPLIYSIGLFCFLAFISYFLLKQIINTQDFEKKIFKLQTLIKKNEDSYELYYKLGQLYLKKKLFSKAILLFRKAIKNWDINDRIGLGSLYNTIGFTYFTLKEYNLSIYYYKIAIKILPDYTIALINLGYAYEKQNLLLESYNFYNKVLLYNNRNSLALKRIKAIQR 170
            MNS+FPLIYS  LF FL  IS+F+LKQI NTQ  EKKI KLQ  +K N  SYE +YKLGQLYLKKKLF KAILLFR+A+K W+ +D+IGLGSLYNTIGFT+FTLK+Y+L+ YYY IAI+ILPDYT+AL NL Y YEK NLL E+YN Y   LL++  N +A  RI  +++
Sbjct:    1 MNSLFPLIYSTVLFIFLFIISFFILKQISNTQKIEKKIVKLQENVKANNTSYEAFYKLGQLYLKKKLFYKAILLFRQALKIWNPDDKIGLGSLYNTIGFTFFTLKQYSLAKYYYSIAIEILPDYTLALTNLAYTYEKLNLLGEAYNCYKSTLLWDPENKIASSRILVVEK 170
[Close]
BLAST of mRNA_H-elongata_contig14897.3277.1 vs. uniprot
Match: A0A5A4MK99_9PHAE (Uncharacterized protein n=5 Tax=Scytosiphonaceae TaxID=2891 RepID=A0A5A4MK99_9PHAE)

HSP 1 Score: 207 bits (528), Expect = 1.130e-65
Identity = 107/172 (62.21%), Postives = 137/172 (79.65%), Query Frame = 0 
Query:    1 MNSIFPLIYSIGLFCFLAFISYFLLKQIINTQDFEKKIFKLQTLIKKNEDSYELYYKLGQLYLKKKLFSKAILLFRKAIKNWDINDRIGLGSLYNTIGFTYFTLKEYNLSIYYYKIAIKILPDYTIALINLGYAYEKQNLLLESYNFYNKVLLYNNRNSLALKRIKAIQRLL 172
            MNSIFPL+YSI LF FL FISY++LKQIINTQ  EKKIFKLQ L+KK++  YE  Y+LGQLYL+KKLF KA+++FRKA+K WD ND+IGL +LYN IGFT+F L+EY+ +IYYYK+AIKI+PD+T+ LINLGYA+EK N ++  YN Y   L ++  N LA  R  A+++ L
Sbjct:    1 MNSIFPLLYSIALFIFLFFISYYILKQIINTQKLEKKIFKLQELVKKDDLYYEDCYQLGQLYLRKKLFLKAVVVFRKALKLWDPNDKIGLANLYNAIGFTFFNLEEYDYAIYYYKVAIKIIPDHTLVLINLGYAFEKINSIITGYNCYKAALFWDPSNELASTRFLAVEKKL 172
[Close]
BLAST of mRNA_H-elongata_contig14897.3277.1 vs. uniprot
Match: A0A6B7EXQ1_9PHAE (Uncharacterized protein n=1 Tax=Cladosiphon okamuranus TaxID=309737 RepID=A0A6B7EXQ1_9PHAE)

HSP 1 Score: 204 bits (520), Expect = 1.850e-64
Identity = 106/172 (61.63%), Postives = 135/172 (78.49%), Query Frame = 0 
Query:    1 MNSIFPLIYSIGLFCFLAFISYFLLKQIINTQDFEKKIFKLQTLIKKNEDSYELYYKLGQLYLKKKLFSKAILLFRKAIKNWDINDRIGLGSLYNTIGFTYFTLKEYNLSIYYYKIAIKILPDYTIALINLGYAYEKQNLLLESYNFYNKVLLYNNRNSLALKRIKAIQRLL 172
            MNSIFPL+YSIGLF FL+ ISY+++KQIINTQ  EKKIF LQ L+KK+   YE  Y+LGQLYL+K LF KA+L+FRKA+K WD ND+IGLG+LYN IGFT+F L+EY+ +IYYYK+AIKI+PD+T+ALINLGY++EK N  +  YN Y   L ++  N LA  R   I++ L
Sbjct:    1 MNSIFPLLYSIGLFFFLSLISYYIVKQIINTQKLEKKIFMLQKLVKKDHPYYEDCYQLGQLYLRKNLFLKAVLVFRKALKLWDPNDKIGLGNLYNAIGFTFFNLEEYDYAIYYYKVAIKIIPDHTLALINLGYSFEKVNSGITGYNCYKAALFWDPYNQLASTRFSVIEKKL 172
[Close]
BLAST of mRNA_H-elongata_contig14897.3277.1 vs. uniprot
Match: A0A8F0F7S0_AKKLU (Uncharacterized protein n=1 Tax=Akkesiphycus lubricus TaxID=3022 RepID=A0A8F0F7S0_AKKLU)

HSP 1 Score: 203 bits (517), Expect = 5.470e-64
Identity = 102/164 (62.20%), Postives = 131/164 (79.88%), Query Frame = 0 
Query:    1 MNSIFPLIYSIGLFCFLAFISYFLLKQIINTQDFEKKIFKLQTLIKKNEDSYELYYKLGQLYLKKKLFSKAILLFRKAIKNWDINDRIGLGSLYNTIGFTYFTLKEYNLSIYYYKIAIKILPDYTIALINLGYAYEKQNLLLESYNFYNKVLLYNNRNSLALKR 164
            MNS+FPL+YS  LF FL+ IS++++KQI NTQ  EKKIF LQ  +K ++ SYE +YKLGQLYLKKKL+ KAIL+FR A+  W+ ND+IGLGSLYNTIGFTYF LK+Y L++YYY +AI I+PDYT+AL NLGYAYEK  L +ES++ Y K L ++++N LA  R
Sbjct:    1 MNSLFPLVYSAALFLFLSVISFYIIKQISNTQKVEKKIFLLQQAVKTSDPSYETFYKLGQLYLKKKLYYKAILVFRNALSVWNSNDKIGLGSLYNTIGFTYFNLKQYELAVYYYNVAITIIPDYTLALTNLGYAYEKLGLTVESHDCYKKALAWDSKNELAASR 164
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig14897.3277.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2R4QPS4_9PHAE1.130e-8675.57Hypothetical chloroplast protein 37 n=3 Tax=Fucace... [more]
A0A1L2F1S0_9PHAE1.480e-8475.43Ycf37 n=1 Tax=Coccophora langsdorfii TaxID=74099 R... [more]
A0A141BSA4_9PHAE2.850e-8273.84Ycf37 n=12 Tax=Sargassum TaxID=3015 RepID=A0A141BS... [more]
A0A0S0GMY7_COSCS1.200e-7066.86Uncharacterized protein n=26 Tax=Laminariales TaxI... [more]
A0A8F0FAZ0_9PHAE2.070e-6865.88Uncharacterized protein n=1 Tax=Desmarestia aculea... [more]
A0A8F0F7S5_9PHAE4.310e-6864.53Uncharacterized protein n=1 Tax=Pseudochorda nagai... [more]
A0A8F0F9I7_9PHAE3.950e-6665.29Uncharacterized protein n=1 Tax=Chorda asiatica Ta... [more]
A0A5A4MK99_9PHAE1.130e-6562.21Uncharacterized protein n=5 Tax=Scytosiphonaceae T... [more]
A0A6B7EXQ1_9PHAE1.850e-6461.63Uncharacterized protein n=1 Tax=Cladosiphon okamur... [more]
A0A8F0F7S0_AKKLU5.470e-6462.20Uncharacterized protein n=1 Tax=Akkesiphycus lubri... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR019734Tetratricopeptide repeatSMARTSM00028tpr_5coord: 52..85
e-value: 0.046
score: 22.8
coord: 125..158
e-value: 0.75
score: 18.8
coord: 91..124
e-value: 0.033
score: 23.3
IPR019734Tetratricopeptide repeatPFAMPF13181TPR_8coord: 93..122
e-value: 0.19
score: 12.0
coord: 52..80
e-value: 6.1E-4
score: 19.8
IPR019734Tetratricopeptide repeatPROSITEPS50005TPRcoord: 91..124
score: 8.998
IPR019734Tetratricopeptide repeatPROSITEPS50005TPRcoord: 125..158
score: 6.933
IPR019734Tetratricopeptide repeatPROSITEPS50005TPRcoord: 52..85
score: 8.909
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 25..89
e-value: 1.1E-7
score: 33.7
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 90..171
e-value: 2.4E-11
score: 45.4
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 41..172
NoneNo IPR availablePANTHERPTHR26312:SF125coord: 5..158
NoneNo IPR availablePANTHERPTHR26312FAMILY NOT NAMEDcoord: 5..158
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..5
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 6..25
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 26..177
NoneNo IPR availableTMHMMTMhelixcoord: 4..26
IPR013026Tetratricopeptide repeat-containing domainPROSITEPS50293TPR_REGIONcoord: 52..158
score: 18.389

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig14897contigH-elongata_contig14897:59..592 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig14897.3277.1mRNA_H-elongata_contig14897.3277.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig14897 59..592 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig14897.3277.1 ID=prot_H-elongata_contig14897.3277.1|Name=mRNA_H-elongata_contig14897.3277.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=178bp
MNSIFPLIYSIGLFCFLAFISYFLLKQIINTQDFEKKIFKLQTLIKKNED
SYELYYKLGQLYLKKKLFSKAILLFRKAIKNWDINDRIGLGSLYNTIGFT
YFTLKEYNLSIYYYKIAIKILPDYTIALINLGYAYEKQNLLLESYNFYNK
VLLYNNRNSLALKRIKAIQRLLNIESC*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR019734TPR_repeat
IPR011990TPR-like_helical_dom_sf
IPR013026TPR-contain_dom