prot_H-elongata_contig148501.3263.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig148501.3263.1
Unique Nameprot_H-elongata_contig148501.3263.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length114
Homology
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BLAST of mRNA_H-elongata_contig148501.3263.1 vs. uniprot
Match: D7FU45_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FU45_ECTSI)

HSP 1 Score: 147 bits (372), Expect = 3.200e-40
Identity = 74/114 (64.91%), Postives = 93/114 (81.58%), Query Frame = 0 
Query:    1 ITNYKVGDRLKGIVVGELEGETGRKAWVRFGVRRVKKGGRSAYVDGMIRVNRQKGIKPARMAVDKPVTVYVSKVIAAEGRLEVSLRPPKVRKPVLDTSNLLPLFDLAVGDELQG 114
            + N +VG+RLKG+VV EL+G +G+KAWVR GV R  KGG+ ++VDGMIR+N++KG+KP ++AVDKPVTVYVSKVI AEGRLEVSLR PK   P++DTS L PL DL  G+EL G
Sbjct:   73 LENLEVGERLKGVVVTELDGTSGKKAWVRVGVMRRAKGGKFSHVDGMIRLNKEKGLKPKKVAVDKPVTVYVSKVIEAEGRLEVSLRAPKPLAPIVDTSTLKPLADLKHGEELTG 186
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig148501.3263.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FU45_ECTSI3.200e-4064.91Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig148501contigH-elongata_contig148501:17..762 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig148501.3263.1mRNA_H-elongata_contig148501.3263.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig148501 17..762 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig148501.3263.1 ID=prot_H-elongata_contig148501.3263.1|Name=mRNA_H-elongata_contig148501.3263.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=114bp
ITNYKVGDRLKGIVVGELEGETGRKAWVRFGVRRVKKGGRSAYVDGMIRV
NRQKGIKPARMAVDKPVTVYVSKVIAAEGRLEVSLRPPKVRKPVLDTSNL
LPLFDLAVGDELQG
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