prot_H-elongata_contig148443.3259.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig148443.3259.1
Unique Nameprot_H-elongata_contig148443.3259.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length194
Homology
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BLAST of mRNA_H-elongata_contig148443.3259.1 vs. uniprot
Match: A0A6H5KTG1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KTG1_9PHAE)

HSP 1 Score: 90.9 bits (224), Expect = 7.230e-18
Identity = 69/199 (34.67%), Postives = 91/199 (45.73%), Query Frame = 0 
Query:    3 EINQWHIIHRGISFTGHMAVGLEGSGGTCTMHIRRSSFPISTRYFLDKHVQLQTVHTRFNEGAITASEGIKATSLKRHLMHSGPTRGNKGGLGRKMMITTAAEVRHRAGHTRDSALISTLDQQVQLREVKPRSYAWALTEIRVVT-------GYAPWHPARAEYLVVACHGTERLVAGWRRASDFRSLAKVAQNTSMHK 194
             +N WH ++  +S +G ++   E   G CTMHIRR+SFPISTR+F +K     T   +      TA  G    S +       P  G+    GR                          +     +  +P SY+WA+TEIRV+        G AP +   A+YLVV C G E+LVAGWRRASDF  LA  A    M K
Sbjct:  276 HLNSWHPLYPTVSSSGRLSA--ESCSGKCTMHIRRTSFPISTRHFPEKP---PTPPNKKRRSDRTARSGSSWGSGR-------PLNGSPLLQGRXXXXXXXXXXXXXXXXXXXXXXXXXXESP---KAGRPTSYSWAVTEIRVIRPDLRFPLGLAPPY---AQYLVVVCMGREKLVAGWRRASDFEKLAATASKAWMPK 456
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig148443.3259.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5KTG1_9PHAE7.230e-1834.67Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig148443contigH-elongata_contig148443:383..964 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig148443.3259.1mRNA_H-elongata_contig148443.3259.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig148443 365..964 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig148443.3259.1 ID=prot_H-elongata_contig148443.3259.1|Name=mRNA_H-elongata_contig148443.3259.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=194bp
MAEINQWHIIHRGISFTGHMAVGLEGSGGTCTMHIRRSSFPISTRYFLDK
HVQLQTVHTRFNEGAITASEGIKATSLKRHLMHSGPTRGNKGGLGRKMMI
TTAAEVRHRAGHTRDSALISTLDQQVQLREVKPRSYAWALTEIRVVTGYA
PWHPARAEYLVVACHGTERLVAGWRRASDFRSLAKVAQNTSMHK
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