prot_H-elongata_contig148141.3246.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig148141.3246.1
Unique Nameprot_H-elongata_contig148141.3246.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length66
Homology
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BLAST of mRNA_H-elongata_contig148141.3246.1 vs. uniprot
Match: D8LS15_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LS15_ECTSI)

HSP 1 Score: 100 bits (249), Expect = 4.540e-26
Identity = 47/66 (71.21%), Postives = 58/66 (87.88%), Query Frame = 0 
Query:    1 MEPRQGTPPTMVLYPEACNQLRVYAFFKGKDGR-WKTYKNKVYSVSSGRKKEFTLTALNANIRPYL 65
            MEPR+GTPPT V +PE C  LRVYAFF+ KDG+ WK+YK+KVYSV+ GRK+E+TLTALNANI+PY+
Sbjct:   44 MEPRRGTPPTTVYFPEGCKNLRVYAFFQAKDGQTWKSYKDKVYSVN-GRKREYTLTALNANIKPYI 108
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BLAST of mRNA_H-elongata_contig148141.3246.1 vs. uniprot
Match: A0A6H5KW90_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KW90_9PHAE)

HSP 1 Score: 98.6 bits (244), Expect = 2.310e-24
Identity = 45/66 (68.18%), Postives = 57/66 (86.36%), Query Frame = 0 
Query:    1 MEPRQGTPPTMVLYPEACNQLRVYAFFKGKDGR-WKTYKNKVYSVSSGRKKEFTLTALNANIRPYL 65
            MEPR+GTPPT V +PE C  LRVYAFF+ KDG+ WK+YK+KVYS++ GRK+E+TLTALN NI+PY+
Sbjct:  126 MEPRRGTPPTTVYFPEGCKNLRVYAFFQAKDGQTWKSYKDKVYSIN-GRKREYTLTALNVNIKPYI 190
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig148141.3246.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LS15_ECTSI4.540e-2671.21Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KW90_9PHAE2.310e-2468.18Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig148141contigH-elongata_contig148141:186..383 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig148141.3246.1mRNA_H-elongata_contig148141.3246.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig148141 156..383 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig148141.3246.1 ID=prot_H-elongata_contig148141.3246.1|Name=mRNA_H-elongata_contig148141.3246.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=66bp
MEPRQGTPPTMVLYPEACNQLRVYAFFKGKDGRWKTYKNKVYSVSSGRKK
EFTLTALNANIRPYL*
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