prot_H-elongata_contig14814.3245.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig14814.3245.1
Unique Nameprot_H-elongata_contig14814.3245.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length68
Homology
BLAST of mRNA_H-elongata_contig14814.3245.1 vs. uniprot
Match: A0A6S7JBU2_PARCT (Uncharacterized protein n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A6S7JBU2_PARCT)

HSP 1 Score: 77.8 bits (190), Expect = 2.720e-16
Identity = 39/58 (67.24%), Postives = 45/58 (77.59%), Query Frame = 0
Query:    4 CGRCKCDKKSVKTFSAANNMDPGAVPPQLQGLTQAEEILIAKDCPIMLVYRLKVGAER 61
            C RCK DKKS K FSA N+MDPG VP QL+GLTQ EE+LI++ CPIM VYR K G +R
Sbjct:   37 CYRCKRDKKSPKKFSAENDMDPGIVPEQLRGLTQVEEMLISRVCPIMRVYR-KHGGQR 93          
BLAST of mRNA_H-elongata_contig14814.3245.1 vs. uniprot
Match: A0A6S7G3B5_PARCT (Uncharacterized protein n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A6S7G3B5_PARCT)

HSP 1 Score: 78.2 bits (191), Expect = 1.150e-15
Identity = 39/58 (67.24%), Postives = 45/58 (77.59%), Query Frame = 0
Query:    4 CGRCKCDKKSVKTFSAANNMDPGAVPPQLQGLTQAEEILIAKDCPIMLVYRLKVGAER 61
            C RCK DKKS K FSA N+MDPG VP QL+GLTQ EE+LI++ CPIM VYR K G +R
Sbjct:  163 CYRCKRDKKSPKKFSAENDMDPGTVPEQLRGLTQVEEMLISRVCPIMRVYR-KHGGQR 219          
BLAST of mRNA_H-elongata_contig14814.3245.1 vs. uniprot
Match: UPI00106CBCF8 (uncharacterized protein LOC114518711 n=1 Tax=Dendronephthya gigantea TaxID=151771 RepID=UPI00106CBCF8)

HSP 1 Score: 78.6 bits (192), Expect = 2.000e-15
Identity = 39/58 (67.24%), Postives = 45/58 (77.59%), Query Frame = 0
Query:    4 CGRCKCDKKSVKTFSAANNMDPGAVPPQLQGLTQAEEILIAKDCPIMLVYRLKVGAER 61
            C RCK DKKS K FSA N+MDPG VP QL+GLTQ EE+LI++ CPIM VYR K G +R
Sbjct:  322 CYRCKRDKKSPKNFSAGNDMDPGIVPEQLRGLTQVEEMLISRVCPIMQVYR-KHGGQR 378          
BLAST of mRNA_H-elongata_contig14814.3245.1 vs. uniprot
Match: A0A7D9ETB4_PARCT (Uncharacterized protein n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A7D9ETB4_PARCT)

HSP 1 Score: 77.4 bits (189), Expect = 2.060e-15
Identity = 39/58 (67.24%), Postives = 44/58 (75.86%), Query Frame = 0
Query:    4 CGRCKCDKKSVKTFSAANNMDPGAVPPQLQGLTQAEEILIAKDCPIMLVYRLKVGAER 61
            C RCK DKKS K FSA N+MDPG VP QL GLTQ EE+LI++ CPIM VYR K G +R
Sbjct:  113 CYRCKKDKKSPKKFSAENDMDPGIVPEQLSGLTQVEEMLISRVCPIMRVYR-KHGGQR 169          
BLAST of mRNA_H-elongata_contig14814.3245.1 vs. uniprot
Match: A0A6H5L976_9PHAE (ATP-dependent DNA helicase n=4 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L976_9PHAE)

HSP 1 Score: 78.2 bits (191), Expect = 2.760e-15
Identity = 38/58 (65.52%), Postives = 44/58 (75.86%), Query Frame = 0
Query:    1 IGTCGRCKCDKKSVKTFSAANNMDPGAVPPQLQGLTQAEEILIAKDCPIMLVYRLKVG 58
            + +C RCK DKKS K FSA N MDPG+VP +LQGLTQ EE+LIA+ CPIM V  LK G
Sbjct:  130 VYSCPRCKKDKKSPKLFSADNTMDPGSVPVELQGLTQTEEMLIARCCPIMRVLHLKGG 187          
BLAST of mRNA_H-elongata_contig14814.3245.1 vs. uniprot
Match: A0A6S7JXT5_PARCT (Uncharacterized protein n=2 Tax=Paramuricea clavata TaxID=317549 RepID=A0A6S7JXT5_PARCT)

HSP 1 Score: 77.8 bits (190), Expect = 3.110e-15
Identity = 39/58 (67.24%), Postives = 45/58 (77.59%), Query Frame = 0
Query:    4 CGRCKCDKKSVKTFSAANNMDPGAVPPQLQGLTQAEEILIAKDCPIMLVYRLKVGAER 61
            C RCK DKKS K FSA N+MDPG VP QL+GLTQ EE+LI++ CPIM VYR K G +R
Sbjct:  148 CYRCKRDKKSPKKFSAENDMDPGIVPEQLRGLTQVEEMLISRVCPIMRVYR-KHGGQR 204          
BLAST of mRNA_H-elongata_contig14814.3245.1 vs. uniprot
Match: A0A7D9LMQ1_PARCT (Uncharacterized protein (Fragment) n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A7D9LMQ1_PARCT)

HSP 1 Score: 77.8 bits (190), Expect = 3.160e-15
Identity = 39/58 (67.24%), Postives = 45/58 (77.59%), Query Frame = 0
Query:    4 CGRCKCDKKSVKTFSAANNMDPGAVPPQLQGLTQAEEILIAKDCPIMLVYRLKVGAER 61
            C RCK DKKS K FSA N+MDPG VP QL+GLTQ EE+LI++ CPIM VYR K G +R
Sbjct:  137 CYRCKRDKKSPKKFSAENDMDPGIVPEQLRGLTQVEEMLISRVCPIMRVYR-KHGGQR 193          
BLAST of mRNA_H-elongata_contig14814.3245.1 vs. uniprot
Match: A0A6H5J8Y8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J8Y8_9PHAE)

HSP 1 Score: 77.8 bits (190), Expect = 3.700e-15
Identity = 38/56 (67.86%), Postives = 43/56 (76.79%), Query Frame = 0
Query:    3 TCGRCKCDKKSVKTFSAANNMDPGAVPPQLQGLTQAEEILIAKDCPIMLVYRLKVG 58
            +C RCK DKKS K FSA N MDPG+VP +LQGLTQ EE+LIA+ CPIM V  LK G
Sbjct:   25 SCPRCKKDKKSPKLFSADNTMDPGSVPVELQGLTQTEEMLIARCCPIMRVLHLKGG 80          
BLAST of mRNA_H-elongata_contig14814.3245.1 vs. uniprot
Match: A0A7D9LNP2_PARCT (Uncharacterized protein n=2 Tax=Paramuricea clavata TaxID=317549 RepID=A0A7D9LNP2_PARCT)

HSP 1 Score: 77.8 bits (190), Expect = 3.710e-15
Identity = 39/58 (67.24%), Postives = 45/58 (77.59%), Query Frame = 0
Query:    4 CGRCKCDKKSVKTFSAANNMDPGAVPPQLQGLTQAEEILIAKDCPIMLVYRLKVGAER 61
            C RCK DKKS K FSA N+MDPG VP QL+GLTQ EE+LI++ CPIM VYR K G +R
Sbjct:  305 CYRCKRDKKSPKKFSAENDMDPGIVPEQLRGLTQVEEMLISRVCPIMRVYR-KHGGQR 361          
BLAST of mRNA_H-elongata_contig14814.3245.1 vs. uniprot
Match: A0A6S7GE38_PARCT (Helitron_like_N domain-containing protein n=3 Tax=Paramuricea clavata TaxID=317549 RepID=A0A6S7GE38_PARCT)

HSP 1 Score: 77.8 bits (190), Expect = 3.710e-15
Identity = 39/58 (67.24%), Postives = 45/58 (77.59%), Query Frame = 0
Query:    4 CGRCKCDKKSVKTFSAANNMDPGAVPPQLQGLTQAEEILIAKDCPIMLVYRLKVGAER 61
            C RCK DKKS K FSA N+MDPG VP QL+GLTQ EE+LI++ CPIM VYR K G +R
Sbjct:  148 CYRCKRDKKSPKKFSAENDMDPGIVPEQLRGLTQVEEMLISRVCPIMRVYR-KHGGQR 204          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig14814.3245.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6S7JBU2_PARCT2.720e-1667.24Uncharacterized protein n=1 Tax=Paramuricea clavat... [more]
A0A6S7G3B5_PARCT1.150e-1567.24Uncharacterized protein n=1 Tax=Paramuricea clavat... [more]
UPI00106CBCF82.000e-1567.24uncharacterized protein LOC114518711 n=1 Tax=Dendr... [more]
A0A7D9ETB4_PARCT2.060e-1567.24Uncharacterized protein n=1 Tax=Paramuricea clavat... [more]
A0A6H5L976_9PHAE2.760e-1565.52ATP-dependent DNA helicase n=4 Tax=Ectocarpus sp. ... [more]
A0A6S7JXT5_PARCT3.110e-1567.24Uncharacterized protein n=2 Tax=Paramuricea clavat... [more]
A0A7D9LMQ1_PARCT3.160e-1567.24Uncharacterized protein (Fragment) n=1 Tax=Paramur... [more]
A0A6H5J8Y8_9PHAE3.700e-1567.86Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A7D9LNP2_PARCT3.710e-1567.24Uncharacterized protein n=2 Tax=Paramuricea clavat... [more]
A0A6S7GE38_PARCT3.710e-1567.24Helitron_like_N domain-containing protein n=3 Tax=... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig14814contigH-elongata_contig14814:5417..5620 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig14814.3245.1mRNA_H-elongata_contig14814.3245.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig14814 5417..5620 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig14814.3245.1 ID=prot_H-elongata_contig14814.3245.1|Name=mRNA_H-elongata_contig14814.3245.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=68bp
IGTCGRCKCDKKSVKTFSAANNMDPGAVPPQLQGLTQAEEILIAKDCPIM
LVYRLKVGAERIRWARG*
back to top