prot_H-elongata_contig14798.3234.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig14798.3234.1
Unique Nameprot_H-elongata_contig14798.3234.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length55
Homology
BLAST of mRNA_H-elongata_contig14798.3234.1 vs. uniprot
Match: A0A6H5K2Q3_9PHAE (GPN-loop GTPase 3 n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K2Q3_9PHAE)

HSP 1 Score: 99.0 bits (245), Expect = 1.960e-23
Identity = 45/49 (91.84%), Postives = 47/49 (95.92%), Query Frame = 0
Query:    1 MVMGPAGTGKSTYCKIMQEHCQNARRTMHVVNLDPAAEAFGYEVAFDIR 49
            MVMGPAGTGKSTYCKIMQEHCQNA+RT+HVVNLDPAAE F YEVAFDIR
Sbjct:    7 MVMGPAGTGKSTYCKIMQEHCQNAKRTVHVVNLDPAAETFEYEVAFDIR 55          
BLAST of mRNA_H-elongata_contig14798.3234.1 vs. uniprot
Match: A0A812V9H0_9DINO (GPN-loop GTPase 3 n=1 Tax=Symbiodinium sp. KB8 TaxID=230985 RepID=A0A812V9H0_9DINO)

HSP 1 Score: 90.9 bits (224), Expect = 9.400e-21
Identity = 39/49 (79.59%), Postives = 45/49 (91.84%), Query Frame = 0
Query:    1 MVMGPAGTGKSTYCKIMQEHCQNARRTMHVVNLDPAAEAFGYEVAFDIR 49
            +VMGPAGTGKSTYCK++QEHCQN  R +HVVNLDPAAE FGYEV+FD+R
Sbjct:    7 IVMGPAGTGKSTYCKLIQEHCQNLGRAVHVVNLDPAAEEFGYEVSFDVR 55          
BLAST of mRNA_H-elongata_contig14798.3234.1 vs. uniprot
Match: A0A835YPS9_9STRA (GPN-loop GTPase 3 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YPS9_9STRA)

HSP 1 Score: 82.0 bits (201), Expect = 3.570e-17
Identity = 36/49 (73.47%), Postives = 43/49 (87.76%), Query Frame = 0
Query:    1 MVMGPAGTGKSTYCKIMQEHCQNARRTMHVVNLDPAAEAFGYEVAFDIR 49
            MVMGPAG GKSTYCK +Q++   +RRT+HVVNLDPAAEAF Y+VAFD+R
Sbjct:    6 MVMGPAGVGKSTYCKAIQDYAATSRRTIHVVNLDPAAEAFEYDVAFDVR 54          
BLAST of mRNA_H-elongata_contig14798.3234.1 vs. uniprot
Match: A0A0B2W503_TOXCA (GPN-loop GTPase 3 n=3 Tax=Ascaridoidea TaxID=33256 RepID=A0A0B2W503_TOXCA)

HSP 1 Score: 81.3 bits (199), Expect = 3.630e-17
Identity = 34/49 (69.39%), Postives = 42/49 (85.71%), Query Frame = 0
Query:    1 MVMGPAGTGKSTYCKIMQEHCQNARRTMHVVNLDPAAEAFGYEVAFDIR 49
            +V+GPAG+GKSTYC I+Q+HCQN +R +HVVNLDPAAEAF YE   D+R
Sbjct:    6 LVIGPAGSGKSTYCSIIQQHCQNVQRLVHVVNLDPAAEAFKYEATVDVR 54          
BLAST of mRNA_H-elongata_contig14798.3234.1 vs. uniprot
Match: A0A843T944_COLES (Uncharacterized protein n=1 Tax=Colocasia esculenta TaxID=4460 RepID=A0A843T944_COLES)

HSP 1 Score: 77.4 bits (189), Expect = 3.720e-17
Identity = 32/49 (65.31%), Postives = 41/49 (83.67%), Query Frame = 0
Query:    1 MVMGPAGTGKSTYCKIMQEHCQNARRTMHVVNLDPAAEAFGYEVAFDIR 49
            +V+GPAG+GKSTYC  + +HC+  RRT+H+VNLDPAAE+F Y VA DIR
Sbjct:    6 LVIGPAGSGKSTYCSSLYQHCETMRRTIHIVNLDPAAESFDYPVAMDIR 54          
BLAST of mRNA_H-elongata_contig14798.3234.1 vs. uniprot
Match: M1BT52_SOLTU (XPA-binding protein n=1 Tax=Solanum tuberosum TaxID=4113 RepID=M1BT52_SOLTU)

HSP 1 Score: 76.6 bits (187), Expect = 5.910e-17
Identity = 32/49 (65.31%), Postives = 40/49 (81.63%), Query Frame = 0
Query:    1 MVMGPAGTGKSTYCKIMQEHCQNARRTMHVVNLDPAAEAFGYEVAFDIR 49
            +V+GPAG+GKSTYC  + +HC+  RRT+H+VNLDPAAE F Y VA DIR
Sbjct:    6 LVIGPAGSGKSTYCSSLYQHCETTRRTIHIVNLDPAAENFDYPVAMDIR 54          
BLAST of mRNA_H-elongata_contig14798.3234.1 vs. uniprot
Match: A0A7S2XYS1_9STRA (GPN-loop GTPase 3 n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XYS1_9STRA)

HSP 1 Score: 80.1 bits (196), Expect = 9.790e-17
Identity = 33/47 (70.21%), Postives = 41/47 (87.23%), Query Frame = 0
Query:    3 MGPAGTGKSTYCKIMQEHCQNARRTMHVVNLDPAAEAFGYEVAFDIR 49
            MGPAG+GKSTYC  +QEHC N++R++HVVNLDPAAE F Y V+FDI+
Sbjct:    1 MGPAGSGKSTYCNAIQEHCDNSKRSVHVVNLDPAAEEFAYRVSFDIK 47          
BLAST of mRNA_H-elongata_contig14798.3234.1 vs. uniprot
Match: A0A199VI62_ANACO (GPN-loop GTPase 3 (Fragment) n=1 Tax=Ananas comosus TaxID=4615 RepID=A0A199VI62_ANACO)

HSP 1 Score: 77.0 bits (188), Expect = 1.050e-16
Identity = 33/49 (67.35%), Postives = 40/49 (81.63%), Query Frame = 0
Query:    1 MVMGPAGTGKSTYCKIMQEHCQNARRTMHVVNLDPAAEAFGYEVAFDIR 49
            +V+GPAG+GKSTYC  + +HC+  RRT+HVVNLDPAAE F Y VA DIR
Sbjct:    6 LVIGPAGSGKSTYCSSLYQHCETTRRTIHVVNLDPAAENFDYPVAMDIR 54          
BLAST of mRNA_H-elongata_contig14798.3234.1 vs. uniprot
Match: A0A3N6QRS5_BRACR (Uncharacterized protein n=2 Tax=Brassica TaxID=3705 RepID=A0A3N6QRS5_BRACR)

HSP 1 Score: 79.3 bits (194), Expect = 1.320e-16
Identity = 33/49 (67.35%), Postives = 40/49 (81.63%), Query Frame = 0
Query:    1 MVMGPAGTGKSTYCKIMQEHCQNARRTMHVVNLDPAAEAFGYEVAFDIR 49
            +V+GPAG+GKSTYC  + +HC+  RRTMH+VNLDPAAE F Y VA DIR
Sbjct:    6 LVIGPAGSGKSTYCSSLNQHCETIRRTMHIVNLDPAAEVFNYPVAMDIR 54          
BLAST of mRNA_H-elongata_contig14798.3234.1 vs. uniprot
Match: C0Z2T5_ARATH (AT4G12790 protein n=1 Tax=Arabidopsis thaliana TaxID=3702 RepID=C0Z2T5_ARATH)

HSP 1 Score: 77.4 bits (189), Expect = 1.740e-16
Identity = 34/49 (69.39%), Postives = 39/49 (79.59%), Query Frame = 0
Query:    1 MVMGPAGTGKSTYCKIMQEHCQNARRTMHVVNLDPAAEAFGYEVAFDIR 49
            +V+GPAG+GKSTYC  + EHC+   RTMHVVNLDPAAE F Y VA DIR
Sbjct:    6 LVIGPAGSGKSTYCSSLYEHCETIGRTMHVVNLDPAAEIFNYPVAMDIR 54          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig14798.3234.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5K2Q3_9PHAE1.960e-2391.84GPN-loop GTPase 3 n=2 Tax=Ectocarpus TaxID=2879 Re... [more]
A0A812V9H0_9DINO9.400e-2179.59GPN-loop GTPase 3 n=1 Tax=Symbiodinium sp. KB8 Tax... [more]
A0A835YPS9_9STRA3.570e-1773.47GPN-loop GTPase 3 n=1 Tax=Tribonema minus TaxID=30... [more]
A0A0B2W503_TOXCA3.630e-1769.39GPN-loop GTPase 3 n=3 Tax=Ascaridoidea TaxID=33256... [more]
A0A843T944_COLES3.720e-1765.31Uncharacterized protein n=1 Tax=Colocasia esculent... [more]
M1BT52_SOLTU5.910e-1765.31XPA-binding protein n=1 Tax=Solanum tuberosum TaxI... [more]
A0A7S2XYS1_9STRA9.790e-1770.21GPN-loop GTPase 3 n=1 Tax=Fibrocapsa japonica TaxI... [more]
A0A199VI62_ANACO1.050e-1667.35GPN-loop GTPase 3 (Fragment) n=1 Tax=Ananas comosu... [more]
A0A3N6QRS5_BRACR1.320e-1667.35Uncharacterized protein n=2 Tax=Brassica TaxID=370... [more]
C0Z2T5_ARATH1.740e-1669.39AT4G12790 protein n=1 Tax=Arabidopsis thaliana Tax... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.40.50.300coord: 1..52
e-value: 4.4E-21
score: 77.4
IPR004130GPN-loop GTPasePFAMPF03029ATP_bind_1coord: 2..49
e-value: 2.4E-19
score: 70.1
IPR004130GPN-loop GTPasePANTHERPTHR21231XPA-BINDING PROTEIN 1-RELATEDcoord: 1..49
IPR030228GPN-loop GTPase 3PANTHERPTHR21231:SF7GPN-LOOP GTPASE 3coord: 1..49
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 1..49

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig14798contigH-elongata_contig14798:274..438 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig14798.3234.1mRNA_H-elongata_contig14798.3234.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig14798 274..441 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig14798.3234.1 ID=prot_H-elongata_contig14798.3234.1|Name=mRNA_H-elongata_contig14798.3234.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=55bp
MVMGPAGTGKSTYCKIMQEHCQNARRTMHVVNLDPAAEAFGYEVAFDIRG
ERCC*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR004130Gpn
IPR030228Gpn3
IPR027417P-loop_NTPase