prot_H-elongata_contig147504.3218.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig147504.3218.1
Unique Nameprot_H-elongata_contig147504.3218.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length88
Homology
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BLAST of mRNA_H-elongata_contig147504.3218.1 vs. uniprot
Match: D8LG24_ECTSI (Protein disulfide-isomerase fusion protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LG24_ECTSI)

HSP 1 Score: 98.6 bits (244), Expect = 4.740e-23
Identity = 53/88 (60.23%), Postives = 61/88 (69.32%), Query Frame = 0 
Query:    1 LQFFKGTVESAAEHKPPRTTPGLVDYFKAIKDGVEPPKPAPPAPKKKSSPPLIEPENSEVTALTADTMDAFLEANKFAVVEFYAPWCG 88
             + F+GT+ESA EHKPPR  P L+DYFKAIKDGVEPP P           PL+EPE+SEVT LT      F+ A +FAVVEFYAPWCG
Sbjct:  114 FRMFEGTLESAKEHKPPRVMPQLMDYFKAIKDGVEPP-PXXXXXXXXXXXPLVEPEDSEVTVLTKANFQEFV-AGEFAVVEFYAPWCG 199
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig147504.3218.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LG24_ECTSI4.740e-2360.23Protein disulfide-isomerase fusion protein n=2 Tax... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.40.30.10coord: 42..88
e-value: 1.1E-8
score: 36.8
IPR036249Thioredoxin-like superfamilySUPERFAMILY52833Thioredoxin-likecoord: 11..88

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig147504contigH-elongata_contig147504:546..1341 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig147504.3218.1mRNA_H-elongata_contig147504.3218.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig147504 546..1341 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig147504.3218.1 ID=prot_H-elongata_contig147504.3218.1|Name=mRNA_H-elongata_contig147504.3218.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=88bp
LQFFKGTVESAAEHKPPRTTPGLVDYFKAIKDGVEPPKPAPPAPKKKSSP
PLIEPENSEVTALTADTMDAFLEANKFAVVEFYAPWCG
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036249Thioredoxin-like_sf