prot_H-elongata_contig147342.3211.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_H-elongata_contig147342.3211.1
Unique Name	prot_H-elongata_contig147342.3211.1
Type	polypeptide
Organism	Himanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length	144

Homology

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BLAST of mRNA_H-elongata_contig147342.3211.1 vs. uniprot
Match: A0A6H5KZE6_9PHAE (Endo/exonuclease/phosphatase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZE6_9PHAE)

HSP 1 Score: 108 bits (271), Expect = 5.170e-26
Identity = 70/155 (45.16%), Postives = 97/155 (62.58%), Query Frame = 0

Query:    1 FGTFNVRTAAVNGVNSIGH-IDSLLRHYAARGCDVIGLQETKRDGHSEITAFGYRVYFSGDCTGVK---GQHEVGLAIKEEIINKAGKDDIAIECINARLLKARISI-RYKFVTFVTAYAPTE--EATEGE--NSK--YITALNSTVSSVPAREY 144
            FGTFNV T A +G N IGH + ++++  +A GCDVIGLQET+R+G   I   GY + +SG   G K   G H VG+AIKE I    G++   +ECI+ RL+K R+ I R   VTFV  YAPTE   +T G   N+K  + TAL++ +  V +R++
Sbjct:   11 FGTFNVHTLAYSGRNPIGHNVMTVMQICSATGCDVIGLQETRREGQGSIAHDGYVIIWSGARAGTKDKRGGHGVGIAIKEAIWESVGEEGRTVECISPRLMKVRLQIGRTCGVTFVVGYAPTETVRSTAGGDVNAKDSFWTALDAAIREVHSRDH 165

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BLAST of mRNA_H-elongata_contig147342.3211.1 vs. uniprot
Match: A0A6H5K3Q1_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K3Q1_9PHAE)

HSP 1 Score: 108 bits (271), Expect = 7.050e-25
Identity = 70/155 (45.16%), Postives = 97/155 (62.58%), Query Frame = 0

Query:    1 FGTFNVRTAAVNGVNSIGH-IDSLLRHYAARGCDVIGLQETKRDGHSEITAFGYRVYFSGDCTGVK---GQHEVGLAIKEEIINKAGKDDIAIECINARLLKARISI-RYKFVTFVTAYAPTE--EATEG--ENSK--YITALNSTVSSVPAREY 144
            FGTFNVRT A +G N IGH + ++++  +A GCDVIGLQET+R G   I   GY + +SG   G K   G H VG+AIKE +    G++   +ECI+ RL+K R+ I R   VTF+  YAPTE    TEG   N+K  + TAL++ +  V +R++
Sbjct:  177 FGTFNVRTLAYSGRNPIGHNVMTVMQICSATGCDVIGLQETRRAGQGSIAHDGYVIIWSGARAGTKDKRGVHGVGIAIKEAMWESVGEEGRTVECISPRLMKVRLQIGRTCGVTFLVGYAPTETVRTTEGCDVNAKDSFWTALDAAIREVHSRDH 331

[Close]

BLAST of mRNA_H-elongata_contig147342.3211.1 vs. uniprot
Match: A0A6H5JMB4_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JMB4_9PHAE)

HSP 1 Score: 107 bits (268), Expect = 1.920e-24
Identity = 70/155 (45.16%), Postives = 96/155 (61.94%), Query Frame = 0

Query:    1 FGTFNVRTAAVNGVNSIGH-IDSLLRHYAARGCDVIGLQETKRDGHSEITAFGYRVYFSGDCTGVK---GQHEVGLAIKEEIINKAGKDDIAIECINARLLKARISI-RYKFVTFVTAYAPTE--EATEGE--NSK--YITALNSTVSSVPAREY 144
            FGTFNVRT A +G N IGH + ++++  +A GCDVIGLQET+R G   I   GY + +SG   G K   G H VG+AIKE +    G++   +ECI+ RL+K R+ I R   VTFV  YAPTE    T G   N+K  + TAL++ +  V +R++
Sbjct:   88 FGTFNVRTLAYSGRNPIGHNVMTVMQICSATGCDVIGLQETRRAGQGSIAHDGYVIIWSGARAGTKDKRGVHGVGIAIKEAMWESVGEEGRTVECISPRLMKVRLQIGRTCGVTFVVGYAPTETVRTTAGGDVNAKDSFWTALDAAIREVHSRDH 242

[Close]

BLAST of mRNA_H-elongata_contig147342.3211.1 vs. uniprot
Match: A0A6H5L660_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L660_9PHAE)

HSP 1 Score: 105 bits (262), Expect = 2.500e-24
Identity = 60/123 (48.78%), Postives = 79/123 (64.23%), Query Frame = 0

Query:    1 FGTFNVRTAAVNGVNSIGH-IDSLLRHYAARGCDVIGLQETKRDGHSEITAFGYRVYFSGDCTGVK---GQHEVGLAIKEEIINKAGKDDIAIECINARLLKARISI-RYKFVTFVTAYAPTE 118
            FGTFNVRT A +G N IGH + ++++  +A GCDVIGLQET+R+G   I   GY + +SG   G K   G H VG+AIKE +    G++   +ECI  RL+K R+ I R   +TFV  YAPTE
Sbjct:  150 FGTFNVRTLAYSGRNPIGHNVMTVMQICSATGCDVIGLQETRREGQGSIAHDGYVIIWSGARAGTKDKRGVHGVGIAIKETMWESVGEEGRKVECIGPRLMKVRLRIGRTCGITFVVRYAPTE 272

[Close]

BLAST of mRNA_H-elongata_contig147342.3211.1 vs. uniprot
Match: A0A6H5KDU4_9PHAE (Reverse transcriptase domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KDU4_9PHAE)

HSP 1 Score: 106 bits (265), Expect = 5.190e-24
Identity = 70/154 (45.45%), Postives = 96/154 (62.34%), Query Frame = 0

Query:    1 FGTFNVRTAAVNGVNSIGH-IDSLLRHYAARGCDVIGLQETKRDGHSEITAFGYRVYFSGDCTGVK---GQHEVGLAIKEEIINKAGKDDIAIECINARLLKARISI-RYKFVTFVTAYAP-TEEATEGE--NSK--YITALNSTVSSVPAREY 144
            FGTFNVRT A +G N IGH + ++++  +  GCDVIGLQET+R+G   I   GY V +SG   G K   G H VG+AIKE + + AG++   +ECI+ RL+K R+ I R   VTFV  YAP T   T G   N+K    TAL++ +  V +R++
Sbjct:  125 FGTFNVRTLAYSGRNPIGHNVMTVMQICSTNGCDVIGLQETRREGQGSIAHDGYVVIWSGARAGTKDKRGVHGVGIAIKEAMWDSAGEEGRTVECISPRLMKVRLQIGRTCGVTFVVGYAPRTVRTTAGGDVNAKDSLWTALDAAIREVHSRDH 278

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BLAST of mRNA_H-elongata_contig147342.3211.1 vs. uniprot
Match: A0A6H5K1H7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K1H7_9PHAE)

HSP 1 Score: 105 bits (263), Expect = 9.900e-24
Identity = 69/155 (44.52%), Postives = 96/155 (61.94%), Query Frame = 0

Query:    1 FGTFNVRTAAVNGVNSIGH-IDSLLRHYAARGCDVIGLQETKRDGHSEITAFGYRVYFSGDCTGVK---GQHEVGLAIKEEIINKAGKDDIAIECINARLLKARISI-RYKFVTFVTAYAPTE--EATEGE--NSK--YITALNSTVSSVPAREY 144
            FGTFNV T A +G N IGH + ++++  +A GCDVIGLQET+R+G   I   GY + +SG   G K   G H VG+AIKE +    G++   +ECI+ RL+K R+ I R   VTFV  YAPTE    T G   N+K  + TAL++ +  V +R++
Sbjct:  659 FGTFNVCTLAYSGRNPIGHNVMTVMQICSATGCDVIGLQETRREGQGSIAHDGYVIIWSGARAGTKDKRGVHGVGIAIKEAMWESVGEEGRTVECISPRLMKVRLQIGRTCGVTFVVRYAPTETVRTTAGGDVNAKDSFWTALDAAIREVHSRDH 813

[Close]

BLAST of mRNA_H-elongata_contig147342.3211.1 vs. uniprot
Match: A0A6H5JGX2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JGX2_9PHAE)

HSP 1 Score: 105 bits (262), Expect = 1.320e-23
Identity = 68/155 (43.87%), Postives = 95/155 (61.29%), Query Frame = 0

Query:    1 FGTFNVRTAAVNGVNSIGH-IDSLLRHYAARGCDVIGLQETKRDGHSEITAFGYRVYFSGDCTGVK---GQHEVGLAIKEEIINKAGKDDIAIECINARLLKARISI-RYKFVTFVTAYAPTE--EATEGE--NSK--YITALNSTVSSVPAREY 144
            FG FNVRT A +G   IGH + ++++  +A GCDVIGLQET+R+G   I   GY + +SG   G K   G H VG+AIKE +    G++   +ECI+ RL+K R+ I R   VTFV  YAPTE    T G   N+K  + TAL++ +  V +R++
Sbjct:   61 FGAFNVRTLAYSGRKPIGHNVMTIMQICSATGCDVIGLQETRREGQGSIAHDGYVIIWSGARAGTKDKRGVHGVGIAIKEAMWESVGEEGRTVECISPRLMKVRLQIGRTCGVTFVVGYAPTETVRTTAGGDVNAKDSFWTALDAAIREVHSRDH 215

[Close]

BLAST of mRNA_H-elongata_contig147342.3211.1 vs. uniprot
Match: A0A6H5K5A7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K5A7_9PHAE)

HSP 1 Score: 105 bits (262), Expect = 1.370e-23
Identity = 67/155 (43.23%), Postives = 96/155 (61.94%), Query Frame = 0

Query:    1 FGTFNVRTAAVNGVNSIGH-IDSLLRHYAARGCDVIGLQETKRDGHSEITAFGYRVYFSGDCTGVK---GQHEVGLAIKEEIINKAGKDDIAIECINARLLKARISIRYKF-VTFVTAYAPTE--EATEGE--NSK--YITALNSTVSSVPAREY 144
            FGTFNVRT A +G N IGH + ++++ ++A GCDVIGLQET+R+G   I   GY + +SG   G K   G H VG+AIKE +    G++   +ECI+ RL+K R+ I +   V  V  YAPTE    T G   N+K  + TAL++ +  V +R++
Sbjct:  135 FGTFNVRTLAYSGRNPIGHNVMTVMQIWSATGCDVIGLQETRREGQGSIAHDGYVIIWSGARAGTKDKRGVHGVGIAIKEAMWESVGEEGRTVECISPRLMKVRLQIGHTCGVISVVGYAPTETVRTTAGGDVNAKDSFWTALDAAIREVHSRDH 289

[Close]

BLAST of mRNA_H-elongata_contig147342.3211.1 vs. uniprot
Match: A0A6H5K0W6_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K0W6_9PHAE)

HSP 1 Score: 103 bits (257), Expect = 6.440e-23
Identity = 68/155 (43.87%), Postives = 95/155 (61.29%), Query Frame = 0

Query:    1 FGTFNVRTAAVNGVNSIGH-IDSLLRHYAARGCDVIGLQETKRDGHSEITAFGYRVYFSGDCTGVK---GQHEVGLAIKEEIINKAGKDDIAIECINARLLKARISI-RYKFVTFVTAYAPTE--EATEGE--NSK--YITALNSTVSSVPAREY 144
            FGTFNVRT A +G N IGH + ++++  +A GCDVIGLQET+R+G   I   GY + +SG   G K   G H VG+AIKE +    G++   +EC + RL+K R+ I R   VTFV  YA TE    T G   N+K  + TAL++ +  V +R++
Sbjct:  822 FGTFNVRTLAYSGRNPIGHNVMTVMQICSATGCDVIGLQETRREGQGSIAHDGYVIIWSGARAGTKDKRGVHGVGIAIKEVMWESVGEEGRTVECSSPRLMKVRLQIGRTCRVTFVVGYALTETVRTTAGRDVNAKDSFWTALDAAIREVHSRDH 976

[Close]

BLAST of mRNA_H-elongata_contig147342.3211.1 vs. uniprot
Match: A0A6H5KV75_9PHAE (Endo/exonuclease/phosphatase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KV75_9PHAE)

HSP 1 Score: 102 bits (255), Expect = 6.910e-23
Identity = 68/155 (43.87%), Postives = 93/155 (60.00%), Query Frame = 0

Query:    1 FGTFNVRTAAVNGVNSIGH-IDSLLRHYAARGCDVIGLQETKRDGHSEITAFGYRVYFSGDCTGVK---GQHEVGLAIKEEIINKAGKDDIAIECINARLLKARISI-RYKFVTFVTAYAPTE--EATEGE--NSK--YITALNSTVSSVPAREY 144
            FGTFNVRT A +G N IGH + ++++  +A GCDVIGLQET+R G   I   GY + +SG   G K   G H VG+ IKE +    G++   +ECI  RL+K R+ I R   V FV  YAPTE    T G   N+K  + TAL++ +  V +R++
Sbjct:   83 FGTFNVRTLACSGRNPIGHNVMTVMQICSATGCDVIGLQETRRAGQGSIAHDGYVIIWSGARAGTKDKRGVHGVGIVIKEAMWESVGEEGRTVECICPRLMKVRLQIGRTCGVAFVVGYAPTETVRTTAGGDVNAKDSFWTALDAAIREVHSRDH 237

The following BLAST results are available for this feature:

BLAST of mRNA_H-elongata_contig147342.3211.1 vs. uniprot

BLAST of mRNA_H-elongata_contig147342.3211.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A6H5KZE6_9PHAE	5.170e-26	45.16	Endo/exonuclease/phosphatase domain-containing pro...	[more]
A0A6H5K3Q1_9PHAE	7.050e-25	45.16	Uncharacterized protein (Fragment) n=1 Tax=Ectocar...	[more]
A0A6H5JMB4_9PHAE	1.920e-24	45.16	Uncharacterized protein (Fragment) n=1 Tax=Ectocar...	[more]
A0A6H5L660_9PHAE	2.500e-24	48.78	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5KDU4_9PHAE	5.190e-24	45.45	Reverse transcriptase domain-containing protein (F...	[more]
A0A6H5K1H7_9PHAE	9.900e-24	44.52	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5JGX2_9PHAE	1.320e-23	43.87	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5K5A7_9PHAE	1.370e-23	43.23	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5K0W6_9PHAE	6.440e-23	43.87	Uncharacterized protein (Fragment) n=1 Tax=Ectocar...	[more]
A0A6H5KV75_9PHAE	6.910e-23	43.87	Endo/exonuclease/phosphatase domain-containing pro...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR005135	Endonuclease/exonuclease/phosphatase	PFAM	PF03372	Exo_endo_phos	coord: 2..81 e-value: 6.2E-6 score: 25.9
IPR036691	Endonuclease/exonuclease/phosphatase superfamily	GENE3D	3.60.10.10		coord: 1..142 e-value: 2.7E-11 score: 45.7
IPR036691	Endonuclease/exonuclease/phosphatase superfamily	SUPERFAMILY	56219	DNase I-like	coord: 2..119

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-elongata_contig147342	contig	H-elongata_contig147342:100..531 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_H-elongata_contig147342.3211.1	mRNA_H-elongata_contig147342.3211.1	Himanthalia elongata Himel1 dioecious	mRNA	H-elongata_contig147342 100..531 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_H-elongata_contig147342.3211.1 ID=prot_H-elongata_contig147342.3211.1|Name=mRNA_H-elongata_contig147342.3211.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=144bp
FGTFNVRTAAVNGVNSIGHIDSLLRHYAARGCDVIGLQETKRDGHSEITA
FGYRVYFSGDCTGVKGQHEVGLAIKEEIINKAGKDDIAIECINARLLKAR
ISIRYKFVTFVTAYAPTEEATEGENSKYITALNSTVSSVPAREY

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR005135	Endo/exonuclease/phosphatase
IPR036691	Endo/exonu/phosph_ase_sf