prot_H-elongata_contig147267.3206.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig147267.3206.1
Unique Nameprot_H-elongata_contig147267.3206.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length142
Homology
BLAST of mRNA_H-elongata_contig147267.3206.1 vs. uniprot
Match: D7FMI7_ECTSI (Glycolate Oxidase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FMI7_ECTSI)

HSP 1 Score: 184 bits (468), Expect = 2.240e-54
Identity = 96/147 (65.31%), Postives = 112/147 (76.19%), Query Frame = 0
Query:    2 QTRAVLAQLVKRAIAAGYTAFVVSGDRPVLGLREADVRNRYVLAPRVARGRVFSSTGARIGPLPDGSCDLVIRRE-------DLNWSDIAWLRTISEGRKIVIKGVMTREDAQEAVRHGADAVWVSNHGGRQLDTIPSTIEVLPEVL 141
            + R VLA LV+RAIAAGYTA VV+ DRPVLG READ+RN Y LAPR+A GRV S+TGARIG  PDG+ DL    +        LNW D+ WLRTI    KIV+K VMTRE A+EA+ HG DAVWVSNHGGRQLDT+P+TIE+LPEV+
Sbjct:  167 KNRTVLAGLVRRAIAAGYTALVVTVDRPVLGRREADLRNCYELAPRLAEGRVVSATGARIGRRPDGTMDLGQASDARPEAGKSLNWDDVHWLRTICGDMKIVVKSVMTREAAEEALAHGVDAVWVSNHGGRQLDTVPATIEILPEVV 313          
BLAST of mRNA_H-elongata_contig147267.3206.1 vs. uniprot
Match: Q9SMD8_9PHAE (Glycolate oxidase (Fragment) n=1 Tax=Laminaria digitata TaxID=80365 RepID=Q9SMD8_9PHAE)

HSP 1 Score: 152 bits (383), Expect = 1.870e-43
Identity = 80/145 (55.17%), Postives = 95/145 (65.52%), Query Frame = 0
Query:    4 RAVLAQLVKRAIAAGYTAFVVSGDRPVLGLREADVRNRYVLAPRVARGRVFSSTGARIGPLPDGSCDLVIRR-------EDLNWSDIAWLRTISEGRKIVIKGVMTREDAQEAVRHGADAVWVSNHGGRQLDTIPSTIEVLPEVL 141
            R + AQLVKRA+AAGYTA  V+ D PVLG READ+RNR+ L   +  G   S+ GA      DG  D  +           L+W+DI WLRTI    KIV+KGVMT EDA EAVR G D +W+SNHG RQLDT P+TIEVLPEV+
Sbjct:    4 RVITAQLVKRALAAGYTALAVTVDTPVLGRREADMRNRFKLPEHLTMGNFASAGGAHASGTKDGGNDSGLAAYVASLIDRTLDWNDIKWLRTICGSMKIVVKGVMTAEDASEAVRQGVDGIWISNHGARQLDTTPATIEVLPEVV 148          
BLAST of mRNA_H-elongata_contig147267.3206.1 vs. uniprot
Match: D8LDI6_ECTSI (Glycolate Oxidase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LDI6_ECTSI)

HSP 1 Score: 149 bits (375), Expect = 1.180e-40
Identity = 79/145 (54.48%), Postives = 94/145 (64.83%), Query Frame = 0
Query:    4 RAVLAQLVKRAIAAGYTAFVVSGDRPVLGLREADVRNRYVLAPRVARGRVFSSTGARIGPLPDGSCDLVIRR-------EDLNWSDIAWLRTISEGRKIVIKGVMTREDAQEAVRHGADAVWVSNHGGRQLDTIPSTIEVLPEVL 141
            R +  QLVKRA+AAGYTA  V+ D PVLG READ+RNR+ L   +  G   S+ GA      DG  D  +           L+W+DI WLRTI    KIV+KGVMT EDA E+VR G D +WVSNHG RQLDT P+TIEVLPEV+
Sbjct:  159 RKITEQLVKRALAAGYTALAVTVDTPVLGRREADMRNRFKLPEHLTMGNFVSAGGAHASGTKDGGNDSGLAAYVASLIDRTLDWNDIKWLRTICGSMKIVVKGVMTAEDAAESVRQGVDGIWVSNHGARQLDTTPATIEVLPEVV 303          
BLAST of mRNA_H-elongata_contig147267.3206.1 vs. uniprot
Match: A0A836CMB2_9STRA (Glycolate oxidase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CMB2_9STRA)

HSP 1 Score: 138 bits (348), Expect = 1.190e-36
Identity = 76/145 (52.41%), Postives = 95/145 (65.52%), Query Frame = 0
Query:    4 RAVLAQLVKRAIAAGYTAFVVSGDRPVLGLREADVRNRYVLAPRVARGRVFSSTGARIGPLPDGSCDLVIRR-------EDLNWSDIAWLRTISEGRKIVIKGVMTREDAQEAVRHGADAVWVSNHGGRQLDTIPSTIEVLPEVL 141
            R + A+LVKRA A+GYTA  V+ D PVLG READVRNR+ L   +  G    + GA      DG  D  +           L+W DI WLR+I++   IV+KGVMT EDA+EA+R+G DA+WVSNHG RQLDT+ STIE LPEV+
Sbjct:  161 RKLTAELVKRAEASGYTALAVTVDTPVLGRREADVRNRFKLPVHLTMGNFIGAGGAHAEGTKDGGKDSGLSAYVASLIDRTLSWDDIRWLRSITK-LAIVVKGVMTAEDAREALRYGVDAIWVSNHGARQLDTVSSTIEALPEVV 304          
BLAST of mRNA_H-elongata_contig147267.3206.1 vs. uniprot
Match: A0A7S2V919_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V919_9STRA)

HSP 1 Score: 129 bits (323), Expect = 1.850e-33
Identity = 71/145 (48.97%), Postives = 88/145 (60.69%), Query Frame = 0
Query:    4 RAVLAQLVKRAIAAGYTAFVVSGDRPVLGLREADVRNRYVLAPRVARGRVFSSTGARIGPLPDGSCDLVIRR-------EDLNWSDIAWLRTISEGRKIVIKGVMTREDAQEAVRHGADAVWVSNHGGRQLDTIPSTIEVLPEVL 141
            R V   LV+RA AAGY A  V+ D PVLG READVRNR+ L P +  G      G+      DG  D  +           LNW DI WLR+++   KIV+KGV T EDA+ AV +  D +WVSNHG RQLDT+ +TIE+LPEV+
Sbjct:  104 RVVTLDLVRRAEAAGYKALAVTVDTPVLGRREADVRNRFKLPPHLTMGNFVGKGGSHAEGTKDGGKDSGLAAYVASLIDRTLNWEDIQWLRSVTS-LKIVVKGVQTAEDAKVAVENKVDGIWVSNHGARQLDTVAATIEMLPEVV 247          
BLAST of mRNA_H-elongata_contig147267.3206.1 vs. uniprot
Match: A0A6V1QYU9_HETAK (Hypothetical protein n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1QYU9_HETAK)

HSP 1 Score: 124 bits (311), Expect = 2.860e-31
Identity = 70/145 (48.28%), Postives = 87/145 (60.00%), Query Frame = 0
Query:    4 RAVLAQLVKRAIAAGYTAFVVSGDRPVLGLREADVRNRYVLAPRVARGRVFSSTGARIGPLPDGSCDLVIRR-------EDLNWSDIAWLRTISEGRKIVIKGVMTREDAQEAVRHGADAVWVSNHGGRQLDTIPSTIEVLPEVL 141
            R V+  LV+RA AAGY AF V+ D PVLG READVRNR+ L   +  G   S  GA      DG  D  +           LNW DIAWL+  +   K+V+KGVMT EDA+ A     D +WVSNHG RQLDT  +TIE++PE++
Sbjct:  160 RDVVLDLVRRAEAAGYKAFAVTVDTPVLGRREADVRNRFKLPTHLTMGNFASKGGAHASGTKDGGKDSGLAAYVAGLIDRTLNWEDIAWLKR-NTFMKVVVKGVMTAEDARMACEANVDGIWVSNHGARQLDTCLATIEMVPEIV 303          
BLAST of mRNA_H-elongata_contig147267.3206.1 vs. uniprot
Match: A0A7S2FX59_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2FX59_9STRA)

HSP 1 Score: 123 bits (309), Expect = 3.150e-31
Identity = 72/146 (49.32%), Postives = 93/146 (63.70%), Query Frame = 0
Query:    4 RAVLAQLVKRAIAAGYTAFVVSGDRPVLGLREADVRNRYVLAPRVARGRVFSSTG---ARIGPLPDGSCDLV-----IRREDLNWSDIAWLRTISEGRKIVIKGVMTREDAQEAVRHGADAVWVSNHGGRQLDTIPSTIEVLPEVL 141
            R V   L+KRA AAGY A  V+ D PVLG READVRN++ L   +  G  F++TG   A      DG   L      +  + LNW DI WLR ++   KIV+KGVM+ EDA+ A ++G D + VSNHG RQLDT+P+TIE+LPEV+
Sbjct:  121 REVTLDLIKRAEAAGYKALAVTVDTPVLGRREADVRNKFSLPAHLTMGN-FANTGGDHASGTKASDGGSGLAKYVASLIDKTLNWDDIQWLRKVTT-MKIVVKGVMSAEDAEVACQNGVDGILVSNHGARQLDTVPATIEILPEVV 264          
BLAST of mRNA_H-elongata_contig147267.3206.1 vs. uniprot
Match: A0A7S1UI71_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UI71_9STRA)

HSP 1 Score: 120 bits (300), Expect = 1.150e-29
Identity = 68/147 (46.26%), Postives = 85/147 (57.82%), Query Frame = 0
Query:    4 RAVLAQLVKRAIAAGYTAFVVSGDRPVLGLREADVRNRYVLAPRVARGRVFSSTGARIGPLPDGS---------CDLVIRREDLNWSDIAWLRTISEGRKIVIKGVMTREDAQEAVRHGADAVWVSNHGGRQLDTIPSTIEVLPEVL 141
            R V   L++RA  AGY AF V+ D P+LG READVRNR+ L   +  G   +  G       D           C  +I R  L W D+ WLR  +   KIV+KGV T EDA  AVR G DA+W+SNHG RQLDT P+T E++PEV+
Sbjct:  159 REVTMDLIRRAERAGYLAFAVTVDTPLLGRREADVRNRFSLPSHLTMGNFANKGGDHSSGTKDAGAEGSGLASYCASLIDRS-LTWEDLRWLRA-NTSLKIVVKGVATAEDAAIAVREGVDAIWISNHGARQLDTTPATCEMIPEVV 303          
BLAST of mRNA_H-elongata_contig147267.3206.1 vs. uniprot
Match: A0A7S4KCV1_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4KCV1_9STRA)

HSP 1 Score: 118 bits (295), Expect = 6.480e-29
Identity = 70/146 (47.95%), Postives = 86/146 (58.90%), Query Frame = 0
Query:    4 RAVLAQLVKRAIAAGYTAFVVSGDRPVLGLREADVRNRYVLAPRVAR-------GRVFSSTGARIGPLPDGSCDLVIRRED--LNWSDIAWLRTISEGRKIVIKGVMTREDAQEAVRHGADAVWVSNHGGRQLDTIPSTIEVLPEV 140
            R + A LV+RA  AGY A  V+ D P LG RE DVRNR+ L   +         G    S G + G    G    V    D  L W DI WLRTI++   IV+KG+MT EDA+EAV+   DA+WVSNHG RQLDT+ STIE+LP +
Sbjct:  163 RGITADLVRRAERAGYRALAVTVDTPCLGRREPDVRNRFKLPSHLTMKNFVEMSGDNDHSNGVKKGGNDSGLASYVASLIDRSLQWDDIHWLRTITK-LPIVVKGIMTAEDAEEAVKCKVDAIWVSNHGARQLDTVASTIELLPSI 307          
BLAST of mRNA_H-elongata_contig147267.3206.1 vs. uniprot
Match: W7UBQ6_9STRA (Peroxisomal glycolate oxidase n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7UBQ6_9STRA)

HSP 1 Score: 117 bits (294), Expect = 8.070e-29
Identity = 65/145 (44.83%), Postives = 86/145 (59.31%), Query Frame = 0
Query:    4 RAVLAQLVKRAIAAGYTAFVVSGDRPVLGLREADVRNRYVLAPRVARGRVFSSTGARIGPLPDGSCDLVIRR-------EDLNWSDIAWLRTISEGRKIVIKGVMTREDAQEAVRHGADAVWVSNHGGRQLDTIPSTIEVLPEVL 141
            R + A+L +RA  AGY A  ++ D PVLG READVRNR+ L   +       + G+      DG  D  +           L W D+ WLR+I     IV+KGVMT EDA  A++ G DA+WVSNHG RQLDT+ STIE+LP+++
Sbjct:  156 RELTAELARRAERAGYKALAITVDTPVLGRREADVRNRFKLPAHLTMANFAGAGGSHAEGTKDGGKDSGLAAYVASLIDRTLQWKDVQWLRSICN-LPIVVKGVMTPEDALVAMQCGVDAIWVSNHGARQLDTVASTIELLPDIV 299          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig147267.3206.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FMI7_ECTSI2.240e-5465.31Glycolate Oxidase n=2 Tax=Ectocarpus TaxID=2879 Re... [more]
Q9SMD8_9PHAE1.870e-4355.17Glycolate oxidase (Fragment) n=1 Tax=Laminaria dig... [more]
D8LDI6_ECTSI1.180e-4054.48Glycolate Oxidase n=2 Tax=Ectocarpus TaxID=2879 Re... [more]
A0A836CMB2_9STRA1.190e-3652.41Glycolate oxidase n=1 Tax=Tribonema minus TaxID=30... [more]
A0A7S2V919_9STRA1.850e-3348.97Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A6V1QYU9_HETAK2.860e-3148.28Hypothetical protein n=2 Tax=Heterosigma akashiwo ... [more]
A0A7S2FX59_9STRA3.150e-3149.32Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A7S1UI71_9STRA1.150e-2946.26Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]
A0A7S4KCV1_9STRA6.480e-2947.95Hypothetical protein n=1 Tax=Odontella aurita TaxI... [more]
W7UBQ6_9STRA8.070e-2944.83Peroxisomal glycolate oxidase n=2 Tax=Monodopsidac... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013785Aldolase-type TIM barrelGENE3D3.20.20.70coord: 1..141
e-value: 8.9E-39
score: 135.2
IPR000262FMN-dependent dehydrogenasePFAMPF01070FMN_dhcoord: 3..140
e-value: 1.0E-37
score: 130.0
NoneNo IPR availablePANTHERPTHR10578S -2-HYDROXY-ACID OXIDASE-RELATEDcoord: 3..140
NoneNo IPR availableSUPERFAMILY51395FMN-linked oxidoreductasescoord: 3..140
IPR008259FMN-dependent alpha-hydroxy acid dehydrogenase, active sitePROSITEPS00557FMN_HYDROXY_ACID_DH_1coord: 120..126
IPR037396FMN hydroxy acid dehydrogenase domainPROSITEPS51349FMN_HYDROXY_ACID_DH_2coord: 1..142
score: 32.475

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig147267contigH-elongata_contig147267:169..1096 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig147267.3206.1mRNA_H-elongata_contig147267.3206.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig147267 169..1096 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig147267.3206.1 ID=prot_H-elongata_contig147267.3206.1|Name=mRNA_H-elongata_contig147267.3206.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=142bp
LQTRAVLAQLVKRAIAAGYTAFVVSGDRPVLGLREADVRNRYVLAPRVAR
GRVFSSTGARIGPLPDGSCDLVIRREDLNWSDIAWLRTISEGRKIVIKGV
MTREDAQEAVRHGADAVWVSNHGGRQLDTIPSTIEVLPEVLL
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013785Aldolase_TIM
IPR000262FMN-dep_DH
IPR008259FMN_hydac_DH_AS
IPR037396FMN_HAD