prot_H-elongata_contig14719.3198.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig14719.3198.1
Unique Nameprot_H-elongata_contig14719.3198.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length486
Homology
BLAST of mRNA_H-elongata_contig14719.3198.1 vs. uniprot
Match: D7FPM2_ECTSI (Myst-related protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FPM2_ECTSI)

HSP 1 Score: 328 bits (841), Expect = 3.070e-96
Identity = 188/416 (45.19%), Postives = 231/416 (55.53%), Query Frame = 0
Query:   84 YKFEYEGWPAIGSRELLSVGMFLHSAAQVMKLGRGFEVRMQALEEAVSTEQPRNSELLSMVHSRLLCTDRELKGLKSGENKYPYSWWTERLKKRLADWYCKRSVLRELIHDAEKSDDEEEKSITGQGXXXPKPLQQQ--------KESGVAIAGNPHQLGSPLMIAAGDGGQGGLSSVGHECGADKTDVEALVVGVAPQEPMTE-----STGGIEQWPAGQRFG-EMGHEASAAGTMLTSAKKSKXXXXXXXXRAEERKSKETRAEGGAVTASSGALLAPHPMAMMTMTMTAGEADDEGKKSKVRRLFSGKRLGVPTGQWYCAECRAKKRVFGCSSCMQNDHPERILQCDGPKCGLEYHLDCLEPPLDCIPNAKWWYCPDCEAGDNRVGCRVCKDDVDYSKLLKCDGPGCDLEWHT 485
            Y+F+Y+GWPAIG RELL+ GMFL+ +A +MK GRGFEV+MQALEEA+S+++P  +ELLS+VHSRLLCT RELK LK GE KYPYSWW ERL+K+L+DWY +R+VLRELI +AE+SD           XXX               K  G A+                                          G+     ++      + G  E   AG   G E   +A+ +G  +                      K+  A GG      G  L+   +     T  AG     GK SK +   + +   VP GQWYC +CR KKRVFGC+ CMQND P  ILQCDGP CGLEYH  CL+PPLD +P++KWWYCPDC   DNRVGCRVCK DVDY KLLKCDGPGC+LEWHT
Sbjct:  237 YRFDYKGWPAIGGRELLAAGMFLYVSAPMMKFGRGFEVKMQALEEALSSDKPEENELLSLVHSRLLCTGRELKALKPGELKYPYSWWAERLQKKLSDWYRRRAVLRELIFEAERSDXXXXXXXXXXXXXXXXXXXXXXXXXXXVTKGLGEAVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGLPKGRSVSAMDVEGAVGAAEDTEAGAAVGSEAEVKANGSGAGMRGNDDDAAGFDGR---------KQRDAGGGVEETKGGEELSSRAV---VATKAAGARGVRGKTSKSKEEPAAEISKVPKGQWYCPDCREKKRVFGCNGCMQNDRPTEILQCDGPMCGLEYHYGCLDPPLDKVPSSKWWYCPDCVRTDNRVGCRVCKVDVDYDKLLKCDGPGCELEWHT 640          
BLAST of mRNA_H-elongata_contig14719.3198.1 vs. uniprot
Match: A0A6H5JA25_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JA25_9PHAE)

HSP 1 Score: 196 bits (497), Expect = 1.660e-50
Identity = 78/102 (76.47%), Postives = 85/102 (83.33%), Query Frame = 0
Query:  384 VPTGQWYCAECRAKKRVFGCSSCMQNDHPERILQCDGPKCGLEYHLDCLEPPLDCIPNAKWWYCPDCEAGDNRVGCRVCKDDVDYSKLLKCDGPGCDLEWHT 485
            VP GQWYC +CR KKRVFGC+ CMQND P  ILQCDGP CGLEYH  CL+PPL  +P++KWWYCPDC   DNRVGCRVCK DVDY KLLKCDGPGC+LEWHT
Sbjct:  157 VPKGQWYCPDCREKKRVFGCNGCMQNDRPTEILQCDGPMCGLEYHYGCLDPPLGKVPSSKWWYCPDCVRTDNRVGCRVCKVDVDYDKLLKCDGPGCELEWHT 258          
BLAST of mRNA_H-elongata_contig14719.3198.1 vs. uniprot
Match: A0A6H5JCM5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCM5_9PHAE)

HSP 1 Score: 176 bits (445), Expect = 2.570e-45
Identity = 85/127 (66.93%), Postives = 106/127 (83.46%), Query Frame = 0
Query:   84 YKFEYEGWPAIGSRELLSVGMFLHSAAQVMKLGRGFEVRMQALEEAVSTEQPRNSELLSMVHSRLLCTDRELKGLKSGENKYPYSWWTERLKKRLADWYCKRSVLRELIHDAEKSDDEEEKSITGQG 210
            Y+F+Y+GWPAIG RELL+ GMFL+ +A +MK GRGFEV+MQALEEA+S+++P  +ELLS+V SRLLCT RELK LK GE KYPYSWW ERL+K+LADWY +R+VLRELI +AE+SDDE +    G G
Sbjct:  236 YRFDYKGWPAIGGRELLAAGMFLYVSAPMMKFGRGFEVKMQALEEALSSDRPEENELLSLVLSRLLCTGRELKALKPGELKYPYSWWAERLQKKLADWYRRRAVLRELIFEAERSDDEGDVLSAGAG 362          
BLAST of mRNA_H-elongata_contig14719.3198.1 vs. uniprot
Match: A0A6P7SPY1_OCTVU (RING-type E3 ubiquitin transferase n=2 Tax=Octopus TaxID=6643 RepID=A0A6P7SPY1_OCTVU)

HSP 1 Score: 70.5 bits (171), Expect = 4.110e-9
Identity = 33/78 (42.31%), Postives = 45/78 (57.69%), Query Frame = 0
Query:  380 KRLGVPTGQWYCAECRAKKRVFGCSSCMQNDHPERILQCDGPKCGLEYHLDCLEPPLDCIPNAKWWYCPDCEAGDNRV 457
            KRL  P   +     R K R   CS C   ++PE+ + CD  +C + YHLDCL+PPL+ IP+   WYCP+C+  D  V
Sbjct:  416 KRLNKPECDYCNDNPRRKCRHCACSVCGGKNNPEKQILCD--ECDMAYHLDCLKPPLEKIPDEDEWYCPECKVDDGTV 491          
BLAST of mRNA_H-elongata_contig14719.3198.1 vs. uniprot
Match: UPI001FB146F7 (PHD finger protein EHD3-like isoform X1 n=2 Tax=Impatiens glandulifera TaxID=253017 RepID=UPI001FB146F7)

HSP 1 Score: 69.7 bits (169), Expect = 5.130e-9
Identity = 33/84 (39.29%), Postives = 46/84 (54.76%), Query Frame = 0
Query:  375 RLFSGKRLGVPTGQWYCAECRAKKRVFGCSSCMQNDHPERILQCDGPKCGLEYHLDCLEPPLDCIPNAKWWYCPDCEAGDNRVG 458
            R  +GK+L      WYC  C        CS C+ +   ++I+ CD   C   YH+ C+EPPLD IPN KW +C  C+AG  ++G
Sbjct:  426 RCLTGKQLSTHGPCWYCPSCL-------CSICLVDKDDDKIILCDA--CDNAYHIYCMEPPLDRIPNGKW-FCRKCDAGLKKIG 499          
BLAST of mRNA_H-elongata_contig14719.3198.1 vs. uniprot
Match: UPI001E2794E8 (E3 ubiquitin-protein ligase UHRF1-like n=1 Tax=Harmonia axyridis TaxID=115357 RepID=UPI001E2794E8)

HSP 1 Score: 68.6 bits (166), Expect = 1.560e-8
Identity = 32/84 (38.10%), Postives = 49/84 (58.33%), Query Frame = 0
Query:  381 RLGVPTGQWYCAECRA----KKR---VFGCSSCMQNDHPERILQCDGPKCGLEYHLDCLEPPLDCIPNAKWWYCPDCEAGDNRV 457
            +L VP  + Y A+C A    K+R     GC +C + D PE +L CD  +C + +H+ CL+PPL+ IP    W+CP C+  +N +
Sbjct:  276 KLPVPPLRKYSADCAACNDNKRRDCKSCGCHTCGKKDRPEELLLCD--ECNMGFHISCLDPPLEKIPEEDEWFCPGCKNDENAI 357          
BLAST of mRNA_H-elongata_contig14719.3198.1 vs. uniprot
Match: UPI001D065594 (E3 ubiquitin-protein ligase UHRF1-like isoform X1 n=3 Tax=Coccinella septempunctata TaxID=41139 RepID=UPI001D065594)

HSP 1 Score: 68.2 bits (165), Expect = 2.040e-8
Identity = 31/83 (37.35%), Postives = 49/83 (59.04%), Query Frame = 0
Query:  382 LGVPTGQWYCAECRA----KKRVF---GCSSCMQNDHPERILQCDGPKCGLEYHLDCLEPPLDCIPNAKWWYCPDCEAGDNRV 457
            L VP  + Y A+C +    +KR     GC +C + D PE +L CD  +C + +H+ CL+PPL+ IP    W+CP+C+  +N +
Sbjct:  275 LPVPPLRTYVADCTSCNDNRKRDCKRCGCHTCGKKDRPEELLLCD--ECNMGFHISCLDPPLEKIPEEDEWFCPECKNDENAI 355          
BLAST of mRNA_H-elongata_contig14719.3198.1 vs. uniprot
Match: A0A6P8YF34_THRPL (RING-type E3 ubiquitin transferase n=2 Tax=Thrips palmi TaxID=161013 RepID=A0A6P8YF34_THRPL)

HSP 1 Score: 68.2 bits (165), Expect = 2.090e-8
Identity = 29/72 (40.28%), Postives = 41/72 (56.94%), Query Frame = 0
Query:  390 YCAEC----RAKKRVFGCSSCMQNDHPERILQCDGPKCGLEYHLDCLEPPLDCIPNAKWWYCPDCEAGDNRV 457
            +CA C    + K +   C  C   D P+R L CD  +C + YHL CL PPL+ IP+   WYCP+C+  +N +
Sbjct:  319 FCATCQDNPKRKCKDCSCQVCGGKDEPDRQLMCD--ECDMAYHLRCLNPPLEAIPDIDEWYCPECKNDENEI 388          
BLAST of mRNA_H-elongata_contig14719.3198.1 vs. uniprot
Match: UPI0018854CBC (E3 ubiquitin-protein ligase UHRF1-like n=2 Tax=Pollicipes pollicipes TaxID=41117 RepID=UPI0018854CBC)

HSP 1 Score: 67.8 bits (164), Expect = 2.720e-8
Identity = 35/98 (35.71%), Postives = 52/98 (53.06%), Query Frame = 0
Query:  369 KKSKVRRLFSGKR---LGVPTGQW--YCAECRAKK----RVFGCSSCMQNDHPERILQCDGPKCGLEYHLDCLEPPLDCIPNAKWWYCPDCEAGDNRV 457
            ++++V RL +G      GV T +    C  CR +     RV GC  C +   P+R + CD  +C + YH+ CL PPL+ IP    WYCP+C+   + V
Sbjct:  286 QRARVDRLAAGDSQPAAGVTTREVGPSCKICRGRPERDCRVCGCHVCHKKSDPDRQIMCD--ECDMPYHISCLTPPLEAIPEEDEWYCPECKTDTSEV 381          
BLAST of mRNA_H-elongata_contig14719.3198.1 vs. uniprot
Match: A0A423SG13_PENVA (RING-type E3 ubiquitin transferase n=1 Tax=Penaeus vannamei TaxID=6689 RepID=A0A423SG13_PENVA)

HSP 1 Score: 67.0 bits (162), Expect = 3.790e-8
Identity = 35/99 (35.35%), Postives = 50/99 (50.51%), Query Frame = 0
Query:  366 DEGKKSKVRRLFSG---KRLGVPTGQWYCAECR----AKKRVFGCSSCMQNDHPERILQCDGPKCGLEYHLDCLEPPLDCIPNAKWWYCPDCEAGDNRV 457
            DE      RR+  G   KR   P     CA C+     K +  GC  C   ++PE+ L CD  +C L YH+ CL PP++ IP+   W+CP C+  D+ +
Sbjct:  260 DERNGDMERRIIEGSPVKRKNAPN----CATCKDNPKRKCKECGCHECGGKENPEKQLMCD--ECDLPYHIYCLTPPMETIPDVDEWFCPLCKNDDSEI 352          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig14719.3198.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FPM2_ECTSI3.070e-9645.19Myst-related protein n=1 Tax=Ectocarpus siliculosu... [more]
A0A6H5JA25_9PHAE1.660e-5076.47Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JCM5_9PHAE2.570e-4566.93Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6P7SPY1_OCTVU4.110e-942.31RING-type E3 ubiquitin transferase n=2 Tax=Octopus... [more]
UPI001FB146F75.130e-939.29PHD finger protein EHD3-like isoform X1 n=2 Tax=Im... [more]
UPI001E2794E81.560e-838.10E3 ubiquitin-protein ligase UHRF1-like n=1 Tax=Har... [more]
UPI001D0655942.040e-837.35E3 ubiquitin-protein ligase UHRF1-like isoform X1 ... [more]
A0A6P8YF34_THRPL2.090e-840.28RING-type E3 ubiquitin transferase n=2 Tax=Thrips ... [more]
UPI0018854CBC2.720e-835.71E3 ubiquitin-protein ligase UHRF1-like n=2 Tax=Pol... [more]
A0A423SG13_PENVA3.790e-835.35RING-type E3 ubiquitin transferase n=1 Tax=Penaeus... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001965Zinc finger, PHD-typeSMARTSM00249PHD_3coord: 390..451
e-value: 9.9E-6
score: 35.0
NoneNo IPR availableGENE3D2.30.30.1150coord: 395..455
e-value: 1.8E-12
score: 49.8
IPR019787Zinc finger, PHD-fingerPFAMPF00628PHDcoord: 403..451
e-value: 3.6E-7
score: 30.0
IPR019787Zinc finger, PHD-fingerPROSITEPS50016ZF_PHD_2coord: 388..453
score: 9.018
IPR011011Zinc finger, FYVE/PHD-typeSUPERFAMILY57903FYVE/PHD zinc fingercoord: 403..454

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig14719contigH-elongata_contig14719:339..5092 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig14719.3198.1mRNA_H-elongata_contig14719.3198.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig14719 339..5092 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig14719.3198.1 ID=prot_H-elongata_contig14719.3198.1|Name=mRNA_H-elongata_contig14719.3198.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=486bp
SSPSKNRKAPDVFKAGPSTILASLVKPTIPARSGVRATAKASSALSKHVG
GKKGGSVALAKSPAAKKPAKPATPPPPPPPPPPYKFEYEGWPAIGSRELL
SVGMFLHSAAQVMKLGRGFEVRMQALEEAVSTEQPRNSELLSMVHSRLLC
TDRELKGLKSGENKYPYSWWTERLKKRLADWYCKRSVLRELIHDAEKSDD
EEEKSITGQGQGEPKPLQQQKESGVAIAGNPHQLGSPLMIAAGDGGQGGL
SSVGHECGADKTDVEALVVGVAPQEPMTESTGGIEQWPAGQRFGEMGHEA
SAAGTMLTSAKKSKSSKKSKKARAEERKSKETRAEGGAVTASSGALLAPH
PMAMMTMTMTAGEADDEGKKSKVRRLFSGKRLGVPTGQWYCAECRAKKRV
FGCSSCMQNDHPERILQCDGPKCGLEYHLDCLEPPLDCIPNAKWWYCPDC
EAGDNRVGCRVCKDDVDYSKLLKCDGPGCDLEWHT*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001965Znf_PHD
IPR019787Znf_PHD-finger
IPR011011Znf_FYVE_PHD